Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16k06
(803 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF181634-1|AAD55420.1| 558|Drosophila melanogaster BcDNA.GH0645... 302 4e-82
AE014134-3050|AAF53768.1| 558|Drosophila melanogaster CG10687-P... 302 4e-82
AY071089-1|AAL48711.1| 460|Drosophila melanogaster RE15573p pro... 90 3e-18
AE013599-2392|AAF57921.1| 460|Drosophila melanogaster CG6796-PA... 90 3e-18
AY070532-1|AAL48003.1| 531|Drosophila melanogaster GM14334p pro... 73 3e-13
AE013599-1606|AAF58445.1| 531|Drosophila melanogaster CG3821-PA... 73 3e-13
AF113612-1|AAD21582.1| 531|Drosophila melanogaster aspartyl tRN... 72 1e-12
AY119180-1|AAM51040.1| 1082|Drosophila melanogaster SD02215p pro... 44 3e-04
AE014134-2794|AAF53577.3| 1082|Drosophila melanogaster CG31739-P... 44 3e-04
AY089547-1|AAL90285.1| 574|Drosophila melanogaster LD23509p pro... 36 0.049
AE014298-1351|AAF46510.2| 607|Drosophila melanogaster CG12141-P... 36 0.049
AE014298-1350|AAN09255.1| 574|Drosophila melanogaster CG12141-P... 36 0.049
AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA... 29 5.6
BT025204-1|ABF17895.1| 784|Drosophila melanogaster FI01112p pro... 29 7.4
AJ250955-1|CAB63944.1| 718|Drosophila melanogaster Sox50E prote... 29 7.4
AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein. 29 7.4
AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB... 29 7.4
AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA... 29 7.4
AE014134-2346|AAF53298.1| 1906|Drosophila melanogaster CG7099-PA... 29 7.4
AE013599-1843|AAF58279.2| 784|Drosophila melanogaster CG8404-PA... 29 7.4
BT001794-1|AAN71549.1| 117|Drosophila melanogaster RH25219p pro... 29 9.8
>AF181634-1|AAD55420.1| 558|Drosophila melanogaster BcDNA.GH06451
protein.
Length = 558
Score = 302 bits (741), Expect = 4e-82
Identities = 136/206 (66%), Positives = 159/206 (77%)
Frame = -2
Query: 664 PFITFXXXXXXXXXXXXXXXXXXLASPEGQLVYELXXXXXXXXXXXKRMTYIEAIEYLRA 485
PF+TF L SP G LV EL +RM Y +AI++L+
Sbjct: 353 PFLTFDDLLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIKWLKE 412
Query: 484 NNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKSFYMSRCVDDRRLTESV 305
NN+TK+DG+FYEFGEDIPE PERKMTD I PI+LC+FPAEIKSFYM RC +D+RLTESV
Sbjct: 413 NNVTKDDGTFYEFGEDIPEAPERKMTDTINEPIMLCRFPAEIKSFYMQRCKEDQRLTESV 472
Query: 304 DVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYTDQRKFGSVPHGGYGLGLER 125
DVL+P VGEIVGGSMRI+D EEL++GYKREGIDP PYYWYTDQR +G++PHGGYGLGLER
Sbjct: 473 DVLLPNVGEIVGGSMRIYDSEELLKGYKREGIDPQPYYWYTDQRVYGTMPHGGYGLGLER 532
Query: 124 FLCWLLDRYHIRDVCLYPRFLERCTP 47
FLCWLL+RYHIR+VCLYPRFL+RC P
Sbjct: 533 FLCWLLNRYHIREVCLYPRFLDRCRP 558
Score = 89.0 bits (211), Expect = 7e-18
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = -1
Query: 803 TQSFQLYLETCLATLGDVXCIXQSYRAEQSRTRRHLAEYSHVEAECPF 660
TQS QLYLETCL LGDV I QSYRAEQSRTRRHLAEY+HVEAECPF
Sbjct: 307 TQSSQLYLETCLPALGDVFTISQSYRAEQSRTRRHLAEYTHVEAECPF 354
>AE014134-3050|AAF53768.1| 558|Drosophila melanogaster CG10687-PA
protein.
Length = 558
Score = 302 bits (741), Expect = 4e-82
Identities = 136/206 (66%), Positives = 159/206 (77%)
Frame = -2
Query: 664 PFITFXXXXXXXXXXXXXXXXXXLASPEGQLVYELXXXXXXXXXXXKRMTYIEAIEYLRA 485
PF+TF L SP G LV EL +RM Y +AI++L+
Sbjct: 353 PFLTFDDLLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIKWLKE 412
Query: 484 NNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKSFYMSRCVDDRRLTESV 305
NN+TK+DG+FYEFGEDIPE PERKMTD I PI+LC+FPAEIKSFYM RC +D+RLTESV
Sbjct: 413 NNVTKDDGTFYEFGEDIPEAPERKMTDTINEPIMLCRFPAEIKSFYMQRCKEDQRLTESV 472
Query: 304 DVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYTDQRKFGSVPHGGYGLGLER 125
DVL+P VGEIVGGSMRI+D EEL++GYKREGIDP PYYWYTDQR +G++PHGGYGLGLER
Sbjct: 473 DVLLPNVGEIVGGSMRIYDSEELLKGYKREGIDPQPYYWYTDQRVYGTMPHGGYGLGLER 532
Query: 124 FLCWLLDRYHIRDVCLYPRFLERCTP 47
FLCWLL+RYHIR+VCLYPRFL+RC P
Sbjct: 533 FLCWLLNRYHIREVCLYPRFLDRCRP 558
Score = 89.0 bits (211), Expect = 7e-18
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = -1
Query: 803 TQSFQLYLETCLATLGDVXCIXQSYRAEQSRTRRHLAEYSHVEAECPF 660
TQS QLYLETCL LGDV I QSYRAEQSRTRRHLAEY+HVEAECPF
Sbjct: 307 TQSSQLYLETCLPALGDVFTISQSYRAEQSRTRRHLAEYTHVEAECPF 354
>AY071089-1|AAL48711.1| 460|Drosophila melanogaster RE15573p
protein.
Length = 460
Score = 90.2 bits (214), Expect = 3e-18
Identities = 53/156 (33%), Positives = 79/156 (50%)
Frame = -2
Query: 520 MTYIEAIEYLRANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKSFYMS 341
M+Y EA++ L+ N + + E + E + G P+ + +PA+ K FYM
Sbjct: 309 MSYDEALQVLQENKDSLKTP--ISLNEGFSKDQELFLVAHCGAPVFVVDWPAQQKPFYMK 366
Query: 340 RCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYTDQRKFGS 161
+ ++D+LMP VGE+ GGS+R D L K P WY D RK+G
Sbjct: 367 VSRSNPNRVHALDLLMPAVGELCGGSLRESDPAIL----KSHPHLPKDLEWYVDLRKYGG 422
Query: 160 VPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERC 53
VP GG+G+G ER+L + +IRDV +PR+ C
Sbjct: 423 VPTGGFGMGFERYLQLVTGVKNIRDVIPFPRYPHSC 458
Score = 34.7 bits (76), Expect = 0.15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1
Query: 797 SFQLYLETCLATLGDVXCIXQSYRAEQSRTRRHLAEYSHVEAE 669
S QL+LE LG + ++RAE S++ HLAE+ EAE
Sbjct: 211 SGQLHLEAMTYGLGKTYTLSPAFRAENSKSPLHLAEFYMFEAE 253
>AE013599-2392|AAF57921.1| 460|Drosophila melanogaster CG6796-PA
protein.
Length = 460
Score = 90.2 bits (214), Expect = 3e-18
Identities = 53/156 (33%), Positives = 79/156 (50%)
Frame = -2
Query: 520 MTYIEAIEYLRANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKSFYMS 341
M+Y EA++ L+ N + + E + E + G P+ + +PA+ K FYM
Sbjct: 309 MSYDEALQVLQENKDSLKTP--ISLNEGFSKDQELFLVAHCGAPVFVVDWPAQQKPFYMK 366
Query: 340 RCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYTDQRKFGS 161
+ ++D+LMP VGE+ GGS+R D L K P WY D RK+G
Sbjct: 367 VSRSNPNRVHALDLLMPAVGELCGGSLRESDPAIL----KSHPHLPKDLEWYVDLRKYGG 422
Query: 160 VPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERC 53
VP GG+G+G ER+L + +IRDV +PR+ C
Sbjct: 423 VPTGGFGMGFERYLQLVTGVKNIRDVIPFPRYPHSC 458
Score = 34.7 bits (76), Expect = 0.15
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1
Query: 797 SFQLYLETCLATLGDVXCIXQSYRAEQSRTRRHLAEYSHVEAE 669
S QL+LE LG + ++RAE S++ HLAE+ EAE
Sbjct: 211 SGQLHLEAMTYGLGKTYTLSPAFRAENSKSPLHLAEFYMFEAE 253
>AY070532-1|AAL48003.1| 531|Drosophila melanogaster GM14334p
protein.
Length = 531
Score = 73.3 bits (172), Expect = 3e-13
Identities = 42/113 (37%), Positives = 61/113 (53%)
Frame = -2
Query: 385 LLCKFPAEIKSFYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGID 206
+L KFP I+ FY ++ + S D+ M G EI+ G+ RI D E L+E K GID
Sbjct: 420 ILDKFPLAIRPFYTMPDPNNPVYSNSYDMFMRGE-EILSGAQRIHDPEYLIERAKHHGID 478
Query: 205 PSPYYWYTDQRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP 47
S Y + ++G PH G G+G+ER + L +IR ++PR +R TP
Sbjct: 479 TSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLTP 531
Score = 33.5 bits (73), Expect = 0.35
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 800 QSFQLYLETCLATLGD-VXCIXQSYRAEQSRTRRHLAEYSHVEAECPF 660
QS QLY + +A D V + +RAE S T RHL E+ ++ E F
Sbjct: 278 QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLEMAF 325
>AE013599-1606|AAF58445.1| 531|Drosophila melanogaster CG3821-PA
protein.
Length = 531
Score = 73.3 bits (172), Expect = 3e-13
Identities = 42/113 (37%), Positives = 61/113 (53%)
Frame = -2
Query: 385 LLCKFPAEIKSFYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGID 206
+L KFP I+ FY ++ + S D+ M G EI+ G+ RI D E L+E K GID
Sbjct: 420 ILDKFPLAIRPFYTMPDPNNPVYSNSYDMFMRGE-EILSGAQRIHDPEYLIERAKHHGID 478
Query: 205 PSPYYWYTDQRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP 47
S Y + ++G PH G G+G+ER + L +IR ++PR +R TP
Sbjct: 479 TSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLTP 531
Score = 33.5 bits (73), Expect = 0.35
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 800 QSFQLYLETCLATLGD-VXCIXQSYRAEQSRTRRHLAEYSHVEAECPF 660
QS QLY + +A D V + +RAE S T RHL E+ ++ E F
Sbjct: 278 QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLEMAF 325
>AF113612-1|AAD21582.1| 531|Drosophila melanogaster aspartyl tRNA
synthetase protein.
Length = 531
Score = 71.7 bits (168), Expect = 1e-12
Identities = 42/113 (37%), Positives = 60/113 (53%)
Frame = -2
Query: 385 LLCKFPAEIKSFYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGID 206
+L KFP I+ FY ++ + S D+ M G EI+ G+ RI D E L+E K GID
Sbjct: 420 ILDKFPLAIRPFYTMPDPNNPVYSNSYDMFMRGE-EILSGAQRIHDPEYLIERAKHHGID 478
Query: 205 PSPYYWYTDQRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP 47
S Y + ++G PH G G+G+ER + L +IR + PR +R TP
Sbjct: 479 TSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMLPRDPKRLTP 531
Score = 33.5 bits (73), Expect = 0.35
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 800 QSFQLYLETCLATLGD-VXCIXQSYRAEQSRTRRHLAEYSHVEAECPF 660
QS QLY + +A D V + +RAE S T RHL E+ ++ E F
Sbjct: 278 QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLEMAF 325
>AY119180-1|AAM51040.1| 1082|Drosophila melanogaster SD02215p protein.
Length = 1082
Score = 43.6 bits (98), Expect = 3e-04
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Frame = -2
Query: 316 TESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYT---DQRKFGSVPHGG 146
+++ D+++ G E+ GGS+RI D + M+ + E I P+ + + G PHGG
Sbjct: 875 SQAYDLVLNGQ-EVGGGSIRIHDRD--MQHFILEQILKIPHDHLSHLLSALESGCPPHGG 931
Query: 145 YGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP*APLPDDVS 20
LGL+R + L IRDV +P+ L P + P +S
Sbjct: 932 IALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPIS 973
>AE014134-2794|AAF53577.3| 1082|Drosophila melanogaster CG31739-PA
protein.
Length = 1082
Score = 43.6 bits (98), Expect = 3e-04
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Frame = -2
Query: 316 TESVDVLMPGVGEIVGGSMRIWDHEELMEGYKREGIDPSPYYWYT---DQRKFGSVPHGG 146
+++ D+++ G E+ GGS+RI D + M+ + E I P+ + + G PHGG
Sbjct: 875 SQAYDLVLNGQ-EVGGGSIRIHDRD--MQHFILEQILKIPHDHLSHLLSALESGCPPHGG 931
Query: 145 YGLGLERFLCWLLDRYHIRDVCLYPRFLERCTP*APLPDDVS 20
LGL+R + L IRDV +P+ L P + P +S
Sbjct: 932 IALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPIS 973
>AY089547-1|AAL90285.1| 574|Drosophila melanogaster LD23509p
protein.
Length = 574
Score = 36.3 bits (80), Expect = 0.049
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -2
Query: 172 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 71
++G P GG+G+G++R +L D +I++V L+P
Sbjct: 521 EYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 554
>AE014298-1351|AAF46510.2| 607|Drosophila melanogaster CG12141-PB,
isoform B protein.
Length = 607
Score = 36.3 bits (80), Expect = 0.049
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -2
Query: 172 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 71
++G P GG+G+G++R +L D +I++V L+P
Sbjct: 554 EYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 587
>AE014298-1350|AAN09255.1| 574|Drosophila melanogaster CG12141-PA,
isoform A protein.
Length = 574
Score = 36.3 bits (80), Expect = 0.049
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -2
Query: 172 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 71
++G P GG+G+G++R +L D +I++V L+P
Sbjct: 521 EYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 554
>AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA
protein.
Length = 1860
Score = 29.5 bits (63), Expect = 5.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 88 PGCGTGPGASRGSAPNPARSRREAPS 165
P CG G+SRG +P P S R S
Sbjct: 1202 PSCGENTGSSRGFSPMPLESTRRGAS 1227
>BT025204-1|ABF17895.1| 784|Drosophila melanogaster FI01112p
protein.
Length = 784
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = +1
Query: 10 KIKTIRRRVEALRACTALGSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTCAGPYT 189
K + RR+ LRA G E ++ P GTG GS NP + P T + YT
Sbjct: 283 KYRPRRRKQSKLRAMQPGGKEQSESSPNPGTG-----GSKSNPKLA--TPPLATASSSYT 335
Query: 190 SSTG*GRC 213
+ T C
Sbjct: 336 TPTDESTC 343
>AJ250955-1|CAB63944.1| 718|Drosophila melanogaster Sox50E protein
protein.
Length = 718
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = +1
Query: 10 KIKTIRRRVEALRACTALGSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTCAGPYT 189
K + RR+ LRA G E ++ P GTG GS NP + P T + YT
Sbjct: 283 KYRPRRRKQSKLRAMQPGGKEQSESSPNPGTG-----GSKSNPKLA--TPPLATASSSYT 335
Query: 190 SSTG*GRC 213
+ T C
Sbjct: 336 TPTDESTC 343
>AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein.
Length = 2715
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 88 PGCGTGPGASRGSAPNPARSRREAPSRTCAGP 183
PG GTGPG +G P A A GP
Sbjct: 1224 PGSGTGPGPGQGPGPGAASGGAGAVGAVGGGP 1255
>AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB,
isoform B protein.
Length = 2716
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 88 PGCGTGPGASRGSAPNPARSRREAPSRTCAGP 183
PG GTGPG +G P A A GP
Sbjct: 1225 PGSGTGPGPGQGPGPGAASGGAGAVGAVGGGP 1256
>AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA,
isoform A protein.
Length = 2703
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 88 PGCGTGPGASRGSAPNPARSRREAPSRTCAGP 183
PG GTGPG +G P A A GP
Sbjct: 1212 PGSGTGPGPGQGPGPGAASGGAGAVGAVGGGP 1243
>AE014134-2346|AAF53298.1| 1906|Drosophila melanogaster CG7099-PA
protein.
Length = 1906
Score = 29.1 bits (62), Expect = 7.4
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = -2
Query: 472 KEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKSFYMSRCVDDRRLTESVDVLM 293
K+ G E+ E + + + + A+G L K K RC D+ +TES DVL+
Sbjct: 410 KKHGLVKEYSEQVGKSRQFRFV-AVGHLGDLSKEDEIKKKALEIRCKDEPNITESTDVLL 468
Query: 292 PGVGEIV 272
+ EIV
Sbjct: 469 KDLPEIV 475
>AE013599-1843|AAF58279.2| 784|Drosophila melanogaster CG8404-PA
protein.
Length = 784
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = +1
Query: 10 KIKTIRRRVEALRACTALGSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTCAGPYT 189
K + RR+ LRA G E ++ P GTG GS NP + P T + YT
Sbjct: 283 KYRPRRRKQSKLRAMQPGGKEQSESSPNPGTG-----GSKSNPKLA--TPPLATASSSYT 335
Query: 190 SSTG*GRC 213
+ T C
Sbjct: 336 TPTDESTC 343
>BT001794-1|AAN71549.1| 117|Drosophila melanogaster RH25219p
protein.
Length = 117
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 611 IHDQILEPT*QIFKRYERGTQLPRDCTRQDVSSCETAPLG 730
I D ++E Q ++ +RGT PRD R V C+ P G
Sbjct: 74 ISDDVVERL-QYTRKVQRGTDAPRDHRRSQVEQCQ-GPAG 111
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,656,136
Number of Sequences: 53049
Number of extensions: 672223
Number of successful extensions: 2515
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2493
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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