Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc16j22
         (131 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0370 + 15030829-15030837,15031579-15031957,15033434-150336...    29   0.40 
02_04_0351 + 22249117-22249624,22249710-22250674                       29   0.69 
04_03_0381 - 15163425-15164903                                         28   1.2  
04_03_0380 - 15150814-15152304                                         28   1.2  
04_03_0369 + 15012906-15014417                                         28   1.2  
04_03_0353 - 14785648-14787213                                         28   1.2  
04_03_0348 + 14735581-14737071                                         28   1.2  
04_03_0347 + 14723118-14724548                                         28   1.2  
04_03_0323 - 14364145-14365656                                         28   1.2  
08_02_0607 + 19285580-19286138,19286734-19287668                       27   1.6  
04_03_0354 + 14830325-14830826,14831491-14832416                       27   1.6  
08_02_1402 - 26786011-26786128,26786263-26786516,26787505-267877...    25   8.5  

>04_03_0370 +
           15030829-15030837,15031579-15031957,15033434-15033626,
           15033859-15034102,15035383-15035445
          Length = 295

 Score = 29.5 bits (63), Expect = 0.40
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -1

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+   + FAEQ+ NC+YK+ E+
Sbjct: 32  VPMLSWLFFAEQQTNCRYKQTEW 54


>02_04_0351 + 22249117-22249624,22249710-22250674
          Length = 490

 Score = 28.7 bits (61), Expect = 0.69
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 116 LQGLVPLSDAITFAEQKLNCKYKKIEF 36
           L G VP+     FAEQ+ NC+YK +E+
Sbjct: 393 LSGGVPMLCWPFFAEQQTNCRYKCVEW 419


>04_03_0381 - 15163425-15164903
          Length = 492

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 392 VPMLSWPFFAEQQTNCRYKRTEW 414


>04_03_0380 - 15150814-15152304
          Length = 496

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 398 VPMLSWPFFAEQQTNCRYKRTEW 420


>04_03_0369 + 15012906-15014417
          Length = 503

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 402 VPMLSWPFFAEQQTNCRYKRTEW 424


>04_03_0353 - 14785648-14787213
          Length = 521

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 116 LQGLVPLSDAITFAEQKLNCKYKKIEF 36
           + G VP+     FAEQ+ NC+YK+ E+
Sbjct: 429 IAGGVPMVCWPFFAEQQTNCRYKRTEW 455


>04_03_0348 + 14735581-14737071
          Length = 496

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 398 VPMLSWPFFAEQQTNCRYKRTEW 420


>04_03_0347 + 14723118-14724548
          Length = 476

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 376 VPMLSWPFFAEQQTNCRYKRTEW 398


>04_03_0323 - 14364145-14365656
          Length = 503

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 402 VPMLSWPFFAEQQTNCRYKRTEW 424


>08_02_0607 + 19285580-19286138,19286734-19287668
          Length = 497

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 110 GLVPLSDAITFAEQKLNCKYKKIEF 36
           G VP+     FAEQ+ NC+YK+ E+
Sbjct: 407 GGVPMVCWPFFAEQQTNCRYKRTEW 431


>04_03_0354 + 14830325-14830826,14831491-14832416
          Length = 475

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 110 GLVPLSDAITFAEQKLNCKYKKIEF 36
           G VP+     FAEQ+ NC+YK+ E+
Sbjct: 385 GDVPMVCWPFFAEQQTNCRYKRTEW 409


>08_02_1402 -
           26786011-26786128,26786263-26786516,26787505-26787732,
           26788920-26789759
          Length = 479

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 58  QFSFCSANVIASDNGTRPCNIK 123
           + SFC   V+ +    RPC IK
Sbjct: 404 EISFCDQTVVPTGADQRPCTIK 425


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,206,663
Number of Sequences: 37544
Number of extensions: 16450
Number of successful extensions: 59
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 14,793,348
effective HSP length: 24
effective length of database: 13,892,292
effective search space used: 263953548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)