Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16j10
(212 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-2428|AAF53354.1| 611|Drosophila melanogaster CG16869-P... 27 3.6
BT029142-1|ABJ17075.1| 1613|Drosophila melanogaster RE40504p pro... 27 4.7
BT015191-1|AAT94420.1| 410|Drosophila melanogaster RH35908p pro... 27 4.7
AY047522-1|AAK77254.1| 713|Drosophila melanogaster GH03013p pro... 27 4.7
AE013599-3460|AAM71119.1| 410|Drosophila melanogaster CG30092-P... 27 4.7
AE013599-3459|AAF46896.3| 1622|Drosophila melanogaster CG30092-P... 27 4.7
AE013599-3458|AAF46895.4| 2964|Drosophila melanogaster CG30092-P... 27 4.7
AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynei... 26 8.2
AF132165-1|AAD34753.1| 737|Drosophila melanogaster unknown prot... 26 8.2
AF017777-4|AAC28403.1| 737|Drosophila melanogaster penguin prot... 26 8.2
AE014298-3120|AAF50828.1| 737|Drosophila melanogaster CG1685-PA... 26 8.2
AE014296-1962|AAF50055.3| 493|Drosophila melanogaster CG7512-PA... 26 8.2
>AE014134-2428|AAF53354.1| 611|Drosophila melanogaster CG16869-PA
protein.
Length = 611
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 71 QETTRFRGYRRKKQNWLASLELRG 142
++T + GY R + W SLEL+G
Sbjct: 189 KKTAQLNGYPRAEDYWFRSLELKG 212
>BT029142-1|ABJ17075.1| 1613|Drosophila melanogaster RE40504p protein.
Length = 1613
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 200 SKAYLTSKTDIASLFRARFNREVQVTLTSFVFSSDNLEIVL 78
+K+Y SK + S+ R R VQ T+ + NLEI +
Sbjct: 1475 AKSYDASKVVVGSVSRGTMGRPVQFTVDAGDAGEGNLEITI 1515
>BT015191-1|AAT94420.1| 410|Drosophila melanogaster RH35908p
protein.
Length = 410
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 200 SKAYLTSKTDIASLFRARFNREVQVTLTSFVFSSDNLEIVL 78
+K+Y SK + S+ R R VQ T+ + NLEI +
Sbjct: 272 AKSYDASKVVVGSVSRGTMGRPVQFTVDAGDAGEGNLEITI 312
>AY047522-1|AAK77254.1| 713|Drosophila melanogaster GH03013p
protein.
Length = 713
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 200 SKAYLTSKTDIASLFRARFNREVQVTLTSFVFSSDNLEIVL 78
+K+Y SK + S+ R R VQ T+ + NLEI +
Sbjct: 575 AKSYDASKVVVGSVSRGTMGRPVQFTVDAGDAGEGNLEITI 615
>AE013599-3460|AAM71119.1| 410|Drosophila melanogaster CG30092-PC,
isoform C protein.
Length = 410
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 200 SKAYLTSKTDIASLFRARFNREVQVTLTSFVFSSDNLEIVL 78
+K+Y SK + S+ R R VQ T+ + NLEI +
Sbjct: 272 AKSYDASKVVVGSVSRGTMGRPVQFTVDAGDAGEGNLEITI 312
>AE013599-3459|AAF46896.3| 1622|Drosophila melanogaster CG30092-PB,
isoform B protein.
Length = 1622
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 200 SKAYLTSKTDIASLFRARFNREVQVTLTSFVFSSDNLEIVL 78
+K+Y SK + S+ R R VQ T+ + NLEI +
Sbjct: 1484 AKSYDASKVVVGSVSRGTMGRPVQFTVDAGDAGEGNLEITI 1524
>AE013599-3458|AAF46895.4| 2964|Drosophila melanogaster CG30092-PD,
isoform D protein.
Length = 2964
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 200 SKAYLTSKTDIASLFRARFNREVQVTLTSFVFSSDNLEIVL 78
+K+Y SK + S+ R R VQ T+ + NLEI +
Sbjct: 1484 AKSYDASKVVVGSVSRGTMGRPVQFTVDAGDAGEGNLEITI 1524
>AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynein
protein.
Length = 4167
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -1
Query: 212 EILTSKAYLTS--KTDIASLFRARFNREVQVTLTSFVFSSDNLEIVLFLD 69
+I +K Y T + D+ +L++ ++ LT F+FSSD + V FL+
Sbjct: 2513 QIEVTKKYKTGDFREDLKNLYKVT---GIKQRLTIFIFSSDQIAEVSFLE 2559
>AF132165-1|AAD34753.1| 737|Drosophila melanogaster unknown
protein.
Length = 737
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 171 YCKLVPRSFQPRSSSDANQFCFFLR*PRNR 82
+ LVP + S+A CF+ P+NR
Sbjct: 353 FAALVPHMLSTKEGSEAAVICFYKSTPKNR 382
>AF017777-4|AAC28403.1| 737|Drosophila melanogaster penguin
protein.
Length = 737
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 171 YCKLVPRSFQPRSSSDANQFCFFLR*PRNR 82
+ LVP + S+A CF+ P+NR
Sbjct: 353 FAALVPHMLSTKEGSEAAVICFYKSTPKNR 382
>AE014298-3120|AAF50828.1| 737|Drosophila melanogaster CG1685-PA
protein.
Length = 737
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 171 YCKLVPRSFQPRSSSDANQFCFFLR*PRNR 82
+ LVP + S+A CF+ P+NR
Sbjct: 353 FAALVPHMLSTKEGSEAAVICFYKSTPKNR 382
>AE014296-1962|AAF50055.3| 493|Drosophila melanogaster CG7512-PA
protein.
Length = 493
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 35 NKYFTHKTLHPRQETTRFRGYRR 103
NK H+ LH RQ+ R G+R+
Sbjct: 417 NKVVAHRRLHLRQDYVRNAGFRK 439
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,045,560
Number of Sequences: 53049
Number of extensions: 120748
Number of successful extensions: 250
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 24,988,368
effective HSP length: 50
effective length of database: 22,335,918
effective search space used: 446718360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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