Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc16i18
         (363 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023229-1|AAY55645.1|  337|Drosophila melanogaster IP02849p pro...    27   7.4  
BT023204-1|AAY55620.1|  337|Drosophila melanogaster IP03049p pro...    27   7.4  
BT023196-1|AAY55612.1|  337|Drosophila melanogaster IP03149p pro...    27   7.4  
AE013599-1418|AAF58555.1|  501|Drosophila melanogaster CG8457-PA...    27   7.4  

>BT023229-1|AAY55645.1|  337|Drosophila melanogaster IP02849p
           protein.
          Length = 337

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +1

Query: 172 SSLHFTQHPDLLTLYN*INTLSISFTSSVNEGFNYY 279
           SS H++QHPD +     I  L+   TSS   GF  Y
Sbjct: 115 SSNHYSQHPDFVASQAGIILLAGFETSSALMGFTLY 150


>BT023204-1|AAY55620.1|  337|Drosophila melanogaster IP03049p
           protein.
          Length = 337

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +1

Query: 172 SSLHFTQHPDLLTLYN*INTLSISFTSSVNEGFNYY 279
           SS H++QHPD +     I  L+   TSS   GF  Y
Sbjct: 115 SSNHYSQHPDFVASQAGIILLAGFETSSALMGFTLY 150


>BT023196-1|AAY55612.1|  337|Drosophila melanogaster IP03149p
           protein.
          Length = 337

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +1

Query: 172 SSLHFTQHPDLLTLYN*INTLSISFTSSVNEGFNYY 279
           SS H++QHPD +     I  L+   TSS   GF  Y
Sbjct: 115 SSNHYSQHPDFVASQAGIILLAGFETSSALMGFTLY 150


>AE013599-1418|AAF58555.1|  501|Drosophila melanogaster CG8457-PA
           protein.
          Length = 501

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +1

Query: 172 SSLHFTQHPDLLTLYN*INTLSISFTSSVNEGFNYY 279
           SS H++QHPD +     I  L+   TSS   GF  Y
Sbjct: 279 SSNHYSQHPDFVASQAGIILLAGFETSSALMGFTLY 314


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,815,309
Number of Sequences: 53049
Number of extensions: 271227
Number of successful extensions: 442
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)