Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16i01
(794 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0136 + 12195422-12195435,12196047-12196122,12196896-121977... 37 0.021
10_08_0614 - 19238064-19238132,19238381-19238407,19238436-192385... 35 0.086
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 34 0.15
06_01_0449 - 3176135-3176329,3176531-3177289,3177420-3177905,317... 33 0.20
04_01_0227 - 2877303-2877659,2877755-2877897,2878102-2878183,287... 33 0.20
08_01_1013 + 10251463-10251858,10252366-10252434,10252545-102526... 33 0.26
06_01_0196 + 1520015-1520191,1520483-1520527,1521851-1521910,152... 33 0.35
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 32 0.60
04_01_0256 + 3402982-3402984,3403077-3403158,3403307-3403449,340... 31 0.80
02_05_0890 - 32546918-32547088,32547224-32547334,32547705-325478... 31 0.80
09_02_0321 - 7223393-7224751,7225971-7226063,7227801-7227947 31 1.1
08_02_0662 + 19789406-19789546,19789646-19789779,19790272-197904... 31 1.1
06_01_0459 + 3272479-3272817,3272927-3272992,3273104-3273169,327... 31 1.4
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 30 2.4
07_01_0039 - 306384-306551,306645-306749,306845-306949,307030-30... 30 2.4
03_05_0225 + 22111269-22111327,22111587-22111638,22112148-221121... 30 2.4
03_01_0612 - 4501595-4501619,4501752-4501906,4502051-4502092,450... 30 2.4
01_01_1102 - 8734984-8736090,8736430-8736557,8736671-8736708,873... 30 2.4
11_03_0071 - 9589669-9590079,9592113-9592334,9592455-9592608,959... 29 3.2
05_04_0190 - 18922555-18923349 29 3.2
04_04_0924 - 29449285-29449290,29449386-29449575,29449669-294497... 29 3.2
08_01_0800 - 7738035-7738381,7739951-7740521 29 4.3
06_03_0938 - 26126669-26127115,26127197-26127619,26127727-26128047 29 4.3
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783... 29 4.3
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485... 29 4.3
03_03_0051 - 14091944-14091949,14092045-14092234,14092328-140924... 29 4.3
03_03_0049 + 14082358-14082613,14084662-14084795,14084883-140849... 29 4.3
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694... 29 5.6
02_05_1148 - 34458732-34460627,34462299-34462547 29 5.6
02_01_0265 - 1754861-1755063,1755186-1755360,1755558-1755653,175... 29 5.6
01_06_0847 + 32411521-32411619,32411737-32411851,32412292-324123... 29 5.6
09_04_0310 + 16578679-16580936,16581027-16581294 28 7.4
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150... 28 7.4
05_03_0249 - 10946993-10947073,10947307-10947432,10948497-109485... 28 7.4
04_04_1249 - 32067644-32067787,32068245-32068346,32068415-320684... 28 7.4
04_03_0981 - 21411073-21411318,21411692-21411802,21413236-21413352 28 7.4
02_01_0372 + 2668597-2668671,2669021-2669126,2669279-2669334,266... 28 7.4
08_02_1195 - 25149891-25151402,25152194-25152493 28 9.8
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115... 28 9.8
08_02_1057 + 23995782-23996446,23998026-23998167,23998242-239994... 28 9.8
07_03_1794 - 29580767-29584189 28 9.8
07_03_1576 - 27862043-27862129,27862935-27862988,27863042-278632... 28 9.8
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 28 9.8
03_06_0401 - 33678814-33679185,33679564-33679676,33679785-336798... 28 9.8
02_03_0299 + 17439626-17439742,17441119-17441229,17441630-17441869 28 9.8
>06_02_0136 +
12195422-12195435,12196047-12196122,12196896-12197707,
12197941-12198010,12199469-12199557,12199633-12199666
Length = 364
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -1
Query: 722 AVCVSKHILNNLTILVLFLIPTTCDHGFCFKCVIDLQSNA----MNIPHSIVCCPLCNTQ 555
+VC+ + + F + + CDH FC C+ + ++N+ M++ ++ CP+C
Sbjct: 213 SVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRNNSPTSGMDVNSALRACPIC--- 269
Query: 554 VKMWRSLKPNAVVTCKFYKKTQERVPAVQQYKNIIK 447
R L + + +Y +E++ + YK +K
Sbjct: 270 ----RKLSYYVIPSVLWYFSKEEKLEIIDNYKAKLK 301
>10_08_0614 -
19238064-19238132,19238381-19238407,19238436-19238510,
19238637-19239317,19239423-19239554,19239676-19239723,
19239828-19239878,19240015-19240134,19241121-19241261,
19241701-19241865,19241981-19242160,19242314-19242445,
19242536-19242643,19242779-19242883,19243217-19243321,
19243407-19243463,19243991-19244010,19244299-19244377,
19245021-19245080,19245562-19245615,19246535-19246600,
19246938-19246990,19247361-19247450,19248152-19248249,
19248348-19248721
Length = 1029
Score = 34.7 bits (76), Expect = 0.086
Identities = 25/105 (23%), Positives = 53/105 (50%)
Frame = -1
Query: 473 VQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQL 294
+++ + ++ L+++ + S E S N + M+ Q I L A+ + + +++NR L
Sbjct: 637 IREKRRHMRALEQKLMESGEASVANASM-MDMQQTITKLTAQCSEKAFELELRSADNRVL 695
Query: 293 IEENTRLNEQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNE 159
E+ + N ++ ELQ +V L Q +T N + + EL++
Sbjct: 696 QEQLQQKNVEINELQEKVLRLEQQ--LTTNTEASPEQCTEHELHD 738
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/82 (23%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = -1
Query: 500 KKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINM--ENQAKIVALEAELKNEKNH 327
++ Q++ + + + + L+++ + E S C + + ++K+ EAE + K
Sbjct: 697 EQLQQKNVEINELQEKVLRLEQQLTTNTEASPEQCTEHELHDLKSKLQLKEAESEKLKYE 756
Query: 326 SDQVTSENRQLIEENTRLNEQV 261
++T ENR+L+ +N+ L E+V
Sbjct: 757 HMKITEENRELVNQNSTLCEEV 778
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 33.9 bits (74), Expect = 0.15
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 3/157 (1%)
Frame = -1
Query: 557 QVKMWRSLKPNAVV-TCKFYKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINME 381
++ M + K AV T + K +E+ + + ++ L E + + N C +
Sbjct: 776 ELAMVQEQKNEAVASTVELGNKLEEQNQQISNLQEAVENL-EAAKTDMYNELTVCQ-EEK 833
Query: 380 NQA--KIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITV 207
N A ++ LEA LKN ++ +Q S+ L + N L E++ L+RQ+ + +
Sbjct: 834 NAALLQVQQLEANLKNLESELEQKQSQVSALEQANEELREKISSLERQLEEARSKLQDEI 893
Query: 206 NPQIGRDDRAPAELNERFRSLVYSTISELFIENRVHS 96
G +RA L + S+ T E + R H+
Sbjct: 894 IKLQGEKERALDNLQQSNTSI--KTFEEELEKQREHN 928
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = -1
Query: 461 KNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAE---LKNEKNHSDQVTSENRQLI 291
KN + ++ VI +E + + E A + LE +KN ++ Q+ E +
Sbjct: 1074 KNNCTLTEQFEVIKIELQEEVKMAHEEKDATLTQLEKSEDSIKNLESELAQLKEELSVQM 1133
Query: 290 EENTRLNEQVQELQRQVRTLAPQ 222
E N+ LN+Q++E +V L +
Sbjct: 1134 ESNSSLNKQLEEAILKVSNLTEE 1156
>06_01_0449 -
3176135-3176329,3176531-3177289,3177420-3177905,
3178302-3178421,3178637-3178703,3178784-3179007,
3179149-3179234,3179936-3180509
Length = 836
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/86 (24%), Positives = 45/86 (52%)
Frame = -1
Query: 500 KKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSD 321
K+T+E + VQQ +K+ Q+ + ++ +N +N+ L +L + + H +
Sbjct: 373 KETEESLSRVQQEFEQLKIQQDEVTVELQR------VNEQNE----NLLGQLSDSREHFE 422
Query: 320 QVTSENRQLIEENTRLNEQVQELQRQ 243
+ SE+ QL+ E +V+EL+++
Sbjct: 423 WLLSEHDQLLRERDNAVREVEELRQK 448
>04_01_0227 -
2877303-2877659,2877755-2877897,2878102-2878183,
2878289-2878291
Length = 194
Score = 33.5 bits (73), Expect = 0.20
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = -1
Query: 500 KKTQERVPAVQ-QYKNIIKVLQERSVISVENSDNNCDINMENQAKIVA-LEAELKNEKNH 327
KK +E V + Q + + K+LQ+ + N + +E + K + ELK K
Sbjct: 94 KKQKEAVESKQIKQEEGYKLLQQEQR-KWKRDKENLNSKLEKKTKETKDAKEELKITKRE 152
Query: 326 SDQVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITV 207
+ + ++ EEN RL+E+ ++LQR+++ L + + V
Sbjct: 153 KEYLNTKLETKREENKRLDEENKKLQRKIKDLQEMQKVFV 192
>08_01_1013 +
10251463-10251858,10252366-10252434,10252545-10252652,
10253261-10253326,10254258-10254395,10255047-10255094,
10256292-10256398,10257228-10257302,10258317-10258368,
10258485-10259068,10259944-10260150,10260236-10260407
Length = 673
Score = 33.1 bits (72), Expect = 0.26
Identities = 24/104 (23%), Positives = 47/104 (45%)
Frame = -1
Query: 401 NCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTLAPQ 222
+C + + + + E++H+ V + +E T N + ++ + ++ P
Sbjct: 453 DCKFVLPVDSSFIRRYPHIVKEQDHAWSVRETTMRESQE-TSSNTEARKTKNTTKSNIPS 511
Query: 221 RGITVNPQIGRDDRAPAELNERFRSLVYSTISELFIENRVHSIQ 90
+G N RD P + NE +LV+S + +F N+V SIQ
Sbjct: 512 KGPDPNMNKARD--GPVQGNE---NLVHSVLDTIFTANKVRSIQ 550
>06_01_0196 +
1520015-1520191,1520483-1520527,1521851-1521910,
1522246-1522358,1522432-1522642,1523087-1523133,
1523211-1523369,1523521-1523624,1524300-1524634
Length = 416
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = -1
Query: 653 CDHGFCFKCVIDLQSNAMNIPHSIVC----CPLCNTQVKMWRS 537
CDH C KC +DL S + + + CPLC T + +R+
Sbjct: 307 CDHELCVKCAMDLCSVIKSYDSAGIAGEIPCPLCRTGIASFRT 349
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 31.9 bits (69), Expect = 0.60
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Frame = -1
Query: 500 KKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNE----K 333
+K Q A+++ N + E+ +++ + I+ E Q K + A+L + +
Sbjct: 1082 QKYQLDFDAMKEKLNFSEEHMEKLEKELQDMTHKFKISSEAQEKYSIINADLTSRLAEME 1141
Query: 332 NHSDQVTSENRQLIEENTRLNEQVQELQRQVRTLA--PQRGITVNPQIGRDDRAPAELNE 159
+TSEN L+E+ + V+E +R TLA + T+ + D A ++
Sbjct: 1142 GQLQHITSENEALVEKLKDIAAIVEEHERTKVTLAESEEENKTLTLSLQSKDEAMMQMEN 1201
Query: 158 RFRSL 144
RSL
Sbjct: 1202 EIRSL 1206
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/105 (24%), Positives = 48/105 (45%)
Frame = -1
Query: 560 TQVKMWRSLKPNAVVTCKFYKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINME 381
T+V + S + N +T K + A+ Q +N I+ LQ+ + +SD+N
Sbjct: 1171 TKVTLAESEEENKTLTLSLQSKDE----AMMQMENEIRSLQDE----LRSSDDNLLREKR 1222
Query: 380 NQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQR 246
++ + A L ++ H DQ + E RL +QV +++R
Sbjct: 1223 LMEELQSTLASLTSQLGHKDQALLSFDEHKTELNRLRDQVLDMER 1267
>04_01_0256 +
3402982-3402984,3403077-3403158,3403307-3403449,
3403557-3403832,3404136-3404315
Length = 227
Score = 31.5 bits (68), Expect = 0.80
Identities = 25/87 (28%), Positives = 45/87 (51%)
Frame = -1
Query: 503 YKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHS 324
YKK ER+ ++ +I K+ ++R V +D E + K + + E N K
Sbjct: 86 YKKDLERMKRQKEDLDI-KLREKREEKKVLQADKTA---AEEEQKRLKRDKENLNLK--V 139
Query: 323 DQVTSENRQLIEENTRLNEQVQELQRQ 243
D ENR+L EEN +L ++++L+++
Sbjct: 140 DTKRKENRRLEEENKKLQRKIKDLEQK 166
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 377 QAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTL 231
QA A E E K K + + + +EN RL E+ ++LQR+++ L
Sbjct: 115 QADKTAAEEEQKRLKRDKENLNLKVDTKRKENRRLEEENKKLQRKIKDL 163
>02_05_0890 -
32546918-32547088,32547224-32547334,32547705-32547884,
32547960-32548064,32548333-32548431,32548524-32548679,
32548772-32548850,32549213-32549278,32549382-32549536,
32549675-32550034,32550150-32550305,32550779-32550856,
32551471-32551812
Length = 685
Score = 31.5 bits (68), Expect = 0.80
Identities = 26/147 (17%), Positives = 64/147 (43%)
Frame = -1
Query: 659 TTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKMWRSLKPNAVVTCKFYKKTQERV 480
T C H FC+ C++ S+ + P CC T+ +++ + + V+ ++ +
Sbjct: 73 TACGHSFCYMCIVTHLSHKSDCP----CCGNYLTKAQLYPNFLLDKVLKKMSARQIAKTA 128
Query: 479 PAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENR 300
+ Q++ LQ+ + ++V+ D+ + E + + E+E N + + +
Sbjct: 129 SPIDQFR---YALQQGNDMAVKELDSLMTLIAEKKRHMEQQESE-TNMQILLVFLHCLRK 184
Query: 299 QLIEENTRLNEQVQELQRQVRTLAPQR 219
Q +EE + +Q ++ + + R
Sbjct: 185 QKLEELNEIQTDLQYIKEDISAVERHR 211
>09_02_0321 - 7223393-7224751,7225971-7226063,7227801-7227947
Length = 532
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 668 LIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQ 555
+ + C H F F C+ A NI H V CP+C Q
Sbjct: 105 IFTSQCSHSFHFLCI------ASNIRHGNVTCPICRAQ 136
>08_02_0662 +
19789406-19789546,19789646-19789779,19790272-19790476,
19791233-19791367,19792117-19792746,19793180-19793356,
19795175-19795198
Length = 481
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/54 (24%), Positives = 24/54 (44%)
Frame = -1
Query: 653 CDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKMWRSLKPNAVVTCKFYKKT 492
C H FC+ C+ + +++++ + CPLC T + K Y +T
Sbjct: 399 CGHRFCYSCIQE-WADSLSSRGKVSTCPLCKTSFAWISKIDEAGTSDQKIYSQT 451
>06_01_0459 +
3272479-3272817,3272927-3272992,3273104-3273169,
3274220-3274537,3274595-3274701,3274816-3274867
Length = 315
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = -1
Query: 341 NEKNHSDQVTSENRQLIEENTRLNEQVQ---ELQRQVRTLAPQRGITVNPQIGRDDRAPA 171
NEK + Q N ++ + L+E ++ +LQ QV+ L+ + G+ +NP PA
Sbjct: 120 NEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGVYLNPSYLSGALEPA 179
Query: 170 ELNERFRSL 144
+ ++ F +L
Sbjct: 180 QASQMFAAL 188
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 416 ENSDNNCDINMENQAKIVALEAELKNEK-NHSDQVTSENRQLIEENTRLNEQVQELQRQV 240
EN+ + + + + ++ E +L+ E+ NH+ V +L ++ L Q +EL+RQ
Sbjct: 55 ENTLKEKEEHEKTRTELEVKEKQLEEERQNHTLTVQRHGEELERQSRELERQREELERQG 114
Query: 239 RTLAPQRG 216
R L + G
Sbjct: 115 RELKMKDG 122
>07_01_0039 -
306384-306551,306645-306749,306845-306949,307030-307111,
307457-307656,307754-307915,308043-308152,308255-308594,
308675-308749,308823-309032,309140-309343,309443-309562,
309643-309752,309832-309976,310716-310943
Length = 787
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -1
Query: 380 NQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTL 231
N A+I L L+ + H ++ ++ + IEE+ +NE ELQRQ +L
Sbjct: 103 NLAEIGKLNGLLEAAEKHHSEIVAQLKSAIEESKAINE---ELQRQYASL 149
>03_05_0225 +
22111269-22111327,22111587-22111638,22112148-22112151,
22112981-22113114,22113201-22113314,22113386-22113505,
22113587-22113618,22113854-22113866,22114144-22114242,
22114388-22114464,22114733-22114922,22115020-22115025
Length = 299
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 428 VISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLI 291
+ S NSDN+C ++ +N V L ++ NH DQ EN L+
Sbjct: 50 ISSESNSDNDCSLSSDNHDSDVHLSNHDESSDNH-DQHFEENDPLL 94
>03_01_0612 -
4501595-4501619,4501752-4501906,4502051-4502092,
4502238-4502279,4502365-4502464,4502825-4502889,
4503140-4503217
Length = 168
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 359 LEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQR 246
L+ + K + D + + QLIEEN RL EQV + R
Sbjct: 78 LKTKSKKILDEIDGLERKRMQLIEENLRLKEQVSRMSR 115
>01_01_1102 -
8734984-8736090,8736430-8736557,8736671-8736708,
8736815-8737030,8737252-8737413,8738381-8738559,
8738693-8738799,8738918-8739082,8739201-8739284,
8739364-8739559
Length = 793
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -1
Query: 425 ISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQ 258
+ VE +N D N E++AK+ ++ EL + Q+T + R+ + L ++
Sbjct: 42 VMVEKDENISDDNTESEAKVQKIQDELVSLNAQLKQITLQRREALNNYLDLKGNIR 97
>11_03_0071 -
9589669-9590079,9592113-9592334,9592455-9592608,
9592981-9593212,9593303-9593558,9593850-9593870
Length = 431
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/96 (23%), Positives = 39/96 (40%)
Frame = -1
Query: 350 ELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITVNPQIGRDDRAPA 171
E+K + + Q+T++ I NT+ N++ Q T+AP V + + AP
Sbjct: 316 EVKKDISCCLQLTNQTDYFIAFNTKANQKKYSTQPNKGTIAPWSSCYVTVTMKAQETAPP 375
Query: 170 ELNERFRSLVYSTISELFIENRVHSIQNYVYAGTSG 63
L +V ST +E I ++ T G
Sbjct: 376 YLQCHDMFVVQSTRVNEDLEPETEDITEELFKKTMG 411
>05_04_0190 - 18922555-18923349
Length = 264
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 653 CDHGFCFKCVIDLQSNAMNIPHSIVCCPLC 564
C HGFC C+ + +NA +++ CP C
Sbjct: 25 CGHGFCRACLARMLANAAG---AVLACPRC 51
>04_04_0924 -
29449285-29449290,29449386-29449575,29449669-29449772,
29449845-29449976,29450064-29450162,29450439-29450451,
29450688-29450719,29450802-29450921,29450992-29451105,
29451192-29451325,29454014-29454251
Length = 393
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 431 SVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLI 291
++ S NSDN+C ++ +N V L ++ NH DQ EN L+
Sbjct: 90 NISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNH-DQHFEENDPLL 135
>08_01_0800 - 7738035-7738381,7739951-7740521
Length = 305
Score = 29.1 bits (62), Expect = 4.3
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 278 EYFPLLAVGFQKLLDHCD 331
++ P+ A+GF K+LDHC+
Sbjct: 21 KFLPIDAIGFNKVLDHCN 38
>06_03_0938 - 26126669-26127115,26127197-26127619,26127727-26128047
Length = 396
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = -1
Query: 392 INMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRG 216
++ + ++ ALEAEL+ + ++T R ++ + T L QV ++ A G
Sbjct: 100 LSFKKDHEVEALEAELRRASEENKKLTEMLRAVVAKYTELQGQVNDMMSAAAAAAVNAG 158
>05_04_0355 -
20577189-20577275,20578001-20578129,20578252-20578371,
20578505-20578741,20578983-20579258,20579375-20579508,
20580006-20581632
Length = 869
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -1
Query: 653 CDHGFCFKCVIDLQSNAMNIPHSIVC--CPLCNTQVKMWRSLKPNAV 519
C H C C+ L + + S CPLC+ V R+L P+++
Sbjct: 36 CGHSLCGPCIASLPPASASASASAASLRCPLCSQCVPFSRALGPSSL 82
>04_03_0658 +
18447986-18448117,18448204-18448317,18448388-18448507,
18448589-18449215,18449289-18449462,18449545-18449809,
18449889-18449959,18450043-18450145,18450221-18450280,
18450533-18450744,18450830-18450901,18451446-18451502,
18451598-18451882,18452359-18452371,18452396-18452463,
18452649-18452747,18452836-18452967,18453038-18453141,
18453234-18453423,18453519-18453524
Length = 967
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 428 VISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLI 291
+ S NSDN+C ++ +N V L ++ NH DQ EN L+
Sbjct: 11 ISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNH-DQHFEENDPLL 55
>03_03_0051 -
14091944-14091949,14092045-14092234,14092328-14092431,
14092503-14092634,14092721-14092819,14093096-14093108,
14093344-14093375,14093458-14093577,14093648-14093761,
14093848-14093981,14095005-14095047,14095394-14095445,
14095703-14095761
Length = 365
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 428 VISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLI 291
+ S NSDN+C ++ +N V L ++ NH DQ EN L+
Sbjct: 63 ISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNH-DQHFEENDPLL 107
>03_03_0049 +
14082358-14082613,14084662-14084795,14084883-14084996,
14085067-14085186,14085269-14085300,14085536-14085548,
14085825-14085923,14086010-14086141,14086213-14086316,
14086410-14086599,14086695-14086700
Length = 399
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 428 VISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLI 291
+ S NSDN+C ++ +N V L ++ NH DQ EN L+
Sbjct: 97 ISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNH-DQHFEENDPLL 141
>03_05_0882 +
28467691-28467730,28468386-28468675,28469262-28469411,
28470126-28470214,28470331-28470440,28470545-28470639,
28471110-28471162,28471374-28471539,28471909-28472001,
28472304-28472432,28472549-28472668,28472862-28472942,
28473495-28473602,28473895-28474038,28474120-28474218,
28474300-28474379,28474830-28474922,28475197-28475320
Length = 687
Score = 28.7 bits (61), Expect = 5.6
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = -1
Query: 539 SLKPNAVVTCKFYKKTQERVPA--VQQYKNIIKVLQERSVISVENSDNNCDINMENQAKI 366
S K NA+ K K+ QER V K +++LQ S+E D N E +K+
Sbjct: 329 SEKENALTELK--KELQERPTRRLVDDLKKKVQILQAVGYNSIEAEDWELATNGEEMSKL 386
Query: 365 VALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQEL 252
AL + + H ++T ++ E++ L E +++
Sbjct: 387 EALLLDKNRKMEH--ELTQLKVKISEKSNLLEEAEKKI 422
>02_05_1148 - 34458732-34460627,34462299-34462547
Length = 714
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 668 LIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVK 549
L C H F F C+ A N+ H CP+C T+ K
Sbjct: 101 LFTAECSHTFHFHCI------AANVKHGSNNCPVCRTKWK 134
>02_01_0265 -
1754861-1755063,1755186-1755360,1755558-1755653,
1756110-1756256,1756343-1756511,1756661-1756812,
1756898-1756968,1757064-1757247,1757332-1757523,
1757664-1757771
Length = 498
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = -1
Query: 389 NMENQAKIVALEAELKNEKNHS---DQVTSENRQLIEENTRLNEQVQELQRQ 243
N+ NQ + + +KN++ + DQ+TSE R L+ +RLN ++ EL+ +
Sbjct: 42 NIRNQIEQIQSGIAMKNDEMGTELIDQLTSEERDLL---SRLNPEITELKEK 90
>01_06_0847 +
32411521-32411619,32411737-32411851,32412292-32412375,
32412430-32413478,32414690-32416371,32416477-32416586,
32417634-32418430,32418839-32418951,32419147-32419194,
32419425-32419652,32419732-32419829,32419967-32420019
Length = 1491
Score = 28.7 bits (61), Expect = 5.6
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Frame = -1
Query: 470 QQYKNIIKVLQERSVISVENSDNNCDI-NMENQAKI-----VALEAELKN---EKNHSDQ 318
++ KN+I+ ER ++ E S C +E Q K+ V +E E KN +KNH D
Sbjct: 275 EKNKNLIET--ERKKLTEEKSRAECLFAKLEEQKKLNEDLRVRIEVERKNAVDQKNHIDH 332
Query: 317 VTSENRQLIEENTRLNEQVQEL 252
++ + + E + L ++++L
Sbjct: 333 LSQKLEEEKERSENLQRKLEKL 354
>09_04_0310 + 16578679-16580936,16581027-16581294
Length = 841
Score = 28.3 bits (60), Expect = 7.4
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = -1
Query: 548 MWRSLKPNAVVTCKFYKK 495
+W+++KPN +V+ FYK+
Sbjct: 623 IWKTMKPNCIVSSPFYKE 640
>09_02_0504 -
10013784-10014041,10014558-10014660,10014932-10015093,
10015416-10015549,10015633-10015716,10015839-10016129,
10016362-10016694,10016823-10016965,10017273-10017429,
10017513-10017616,10017728-10017888,10017971-10018287,
10018396-10018677,10018759-10019226,10019338-10019391,
10019689-10019742,10019943-10020021,10020108-10020196,
10021153-10021273,10022321-10022637
Length = 1236
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 387 IYVTIVVAVFDTNHAPFL*HFDNVFILLHGRNSFLSFLVKLTRH 518
+++T V FD N F F +F+L + F+V LTRH
Sbjct: 579 VFLTYYVIGFDPNVLRFFRQFLVLFVLCEVIYALFRFIVALTRH 622
>05_03_0249 -
10946993-10947073,10947307-10947432,10948497-10948552,
10949066-10949338,10951434-10951716
Length = 272
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 386 MENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRT 234
M+ + V ++ E H E +Q +E +RLNEQVQE +R T
Sbjct: 117 MKKNMEAVTKQSRTLEEAKHGS--VEEIQQYQKEISRLNEQVQEFKRLSET 165
>04_04_1249 -
32067644-32067787,32068245-32068346,32068415-32068438,
32068439-32068543,32068625-32068729,32068885-32068966,
32069254-32069456,32069534-32069692,32070045-32070154,
32070264-32070405,32070544-32070690,32070773-32070847,
32070923-32071132,32071223-32071426,32071514-32071633,
32071743-32071852,32072033-32072177,32072266-32072499,
32072611-32072646
Length = 818
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/99 (21%), Positives = 43/99 (43%)
Frame = -1
Query: 500 KKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSD 321
K+ QE ++QQY + ++ +S + ME A + L + KNH D
Sbjct: 224 KRLQEYNTSLQQYNSNLQADASKSGDIISKLQKEKSAMMETMASLKDLNNSM---KNHLD 280
Query: 320 QVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITVN 204
+ ++ I +L ++V L+ ++ + R +V+
Sbjct: 281 SSRTSQQEAIRMKEQLMKEVDCLRIELHQIREDRDQSVS 319
>04_03_0981 - 21411073-21411318,21411692-21411802,21413236-21413352
Length = 157
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/50 (24%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -1
Query: 386 MENQAKIVALEAELKNEKNHSDQVT-SENRQLIEENTRLNEQVQELQRQV 240
++ Q +I +A+ + + +Q+ SE RQ++++ LN+Q++E + +
Sbjct: 31 LQMQQRIARAQAKKEELRKQPEQIILSEVRQMVQQMQALNQQLEEAETAI 80
>02_01_0372 +
2668597-2668671,2669021-2669126,2669279-2669334,
2669830-2669907,2669993-2670066,2670147-2670280,
2670377-2670472,2670703-2670854
Length = 256
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = -1
Query: 470 QQYKNIIKVLQERSVISVENSDN--NCDINME--NQAKIVALEAELKNEKNHSDQVTSEN 303
++YK I+ L+ S ++ + +N +C + + N+A I L EL+ K H D + S
Sbjct: 105 EEYKREIEQLKLGSEMNSNDLENKLSCAVVQQATNEAVIKQLNLELEAHKAHIDMLNSRL 164
Query: 302 RQLIEE-NTRLNEQVQELQ 249
Q+ + + + ++Q+L+
Sbjct: 165 EQVTADVHQQYKNEIQDLK 183
>08_02_1195 - 25149891-25151402,25152194-25152493
Length = 603
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/101 (20%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Frame = -1
Query: 500 KKTQERVPAVQQYKNIIKVLQERSVISVEN-------SDNNCDINMENQAKIVALEAELK 342
K + P + +N+ ++L+E V S+E+ ++ N D ++ A++ + EL
Sbjct: 264 KVKSDMSPNTVECENMSQLLKEWGVFSLESLKKELAEANENRDAALQEAAEMKSSLGELT 323
Query: 341 NEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTLAPQR 219
+ + SE ++ +++ T + +R R+LA R
Sbjct: 324 TKLVSLEGYCSELKKALKQATSTKNMISHSKRSARSLAVSR 364
>08_02_1060 +
24007980-24008662,24010078-24010219,24010293-24011537,
24012453-24013040
Length = 885
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = -3
Query: 750 EPVI--NFKFECSVCFETYSQQS 688
EPVI + KFEC VC +T+ +QS
Sbjct: 358 EPVIGKDGKFECPVCNKTFEEQS 380
>08_02_1057 +
23995782-23996446,23998026-23998167,23998242-23999486,
23999521-23999529
Length = 686
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = -3
Query: 750 EPVI--NFKFECSVCFETYSQQS 688
EPVI + KFEC VC +T+ +QS
Sbjct: 352 EPVIGKDGKFECPVCNKTFEEQS 374
>07_03_1794 - 29580767-29584189
Length = 1140
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/58 (20%), Positives = 27/58 (46%)
Frame = -1
Query: 332 NHSDQVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNE 159
NH ++V R L+E L++++ + + T PQ +++ + + P + E
Sbjct: 35 NHVEEVYRAYRALVERYDHLSKELHKANHTIATACPQHDVSLLQEQDDAEFTPIRIQE 92
>07_03_1576 -
27862043-27862129,27862935-27862988,27863042-27863243,
27865015-27865249,27865338-27865404,27865489-27865639,
27866898-27866957,27867402-27867466
Length = 306
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -1
Query: 656 TCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVK 549
TC H C KC D +S + + CP C +K
Sbjct: 180 TCSHAMCIKCYRDWRSRSQS-------CPFCRDSLK 208
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = -1
Query: 455 IIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTR 276
++K +RSV + + + N Q +++A EAE N VT++N+ I ++ +
Sbjct: 579 VVKKPWQRSVSREKEPEKDISSNKPLQNRVLAEEAEKTN-------VTADNKSQIIQDKK 631
Query: 275 LNEQVQELQRQVRTLAPQRGITVN 204
N E Q+ A + +T N
Sbjct: 632 NNGATTENSSQISESAKKLPLTAN 655
>03_06_0401 -
33678814-33679185,33679564-33679676,33679785-33679834,
33680024-33680103,33680541-33680635,33681079-33681124
Length = 251
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = -1
Query: 641 FCFKCV---IDLQSNAMNIPHSIVCCPLCNT 558
FC+KC+ + + S P S V CPLC T
Sbjct: 18 FCYKCICQWVKIVSTKHAEPLSSVQCPLCKT 48
>02_03_0299 + 17439626-17439742,17441119-17441229,17441630-17441869
Length = 155
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/50 (24%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -1
Query: 386 MENQAKIVALEAELKNEKNHSDQVT-SENRQLIEENTRLNEQVQELQRQV 240
++ Q +I +A+ + + +Q+ SE RQ++++ LN+Q++E + +
Sbjct: 31 LQMQQQIARAQAKKEELRKQPEQIILSEVRQMVQQMQALNQQLEETETAI 80
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,077,138
Number of Sequences: 37544
Number of extensions: 345980
Number of successful extensions: 1149
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -