Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16i01
(794 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 34 0.10
U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical p... 32 0.54
U64848-14|AAB04890.1| 382|Caenorhabditis elegans Hypothetical p... 32 0.54
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 32 0.54
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 31 0.72
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 31 0.72
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 31 0.72
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 31 0.72
Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical pr... 31 0.95
AF106583-6|AAD03137.1| 233|Caenorhabditis elegans Hypothetical ... 31 0.95
Z48544-4|CAA88443.3| 250|Caenorhabditis elegans Hypothetical pr... 31 1.3
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 31 1.3
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 31 1.3
Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical pr... 30 2.2
U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 30 2.2
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z80221-1|CAB02309.1| 690|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical pr... 29 2.9
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical pr... 29 2.9
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 29 2.9
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 29 3.8
U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL021483-5|CAA16346.1| 255|Caenorhabditis elegans Hypothetical ... 29 3.8
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 29 5.1
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 29 5.1
U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical pr... 29 5.1
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF038615-1|AAB94149.3| 532|Caenorhabditis elegans Hypothetical ... 29 5.1
AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical ... 29 5.1
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 28 6.7
Z70751-4|CAI91168.1| 497|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z70751-3|CAA94752.1| 529|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z70750-18|CAI91163.1| 497|Caenorhabditis elegans Hypothetical p... 28 6.7
Z70750-17|CAA94749.1| 529|Caenorhabditis elegans Hypothetical p... 28 6.7
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 28 6.7
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z49071-6|CAA88876.2| 292|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 28 6.7
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 28 6.7
AF000196-1|AAC24252.1| 158|Caenorhabditis elegans Hypothetical ... 28 6.7
AC024818-4|AAF60782.5| 457|Caenorhabditis elegans Hypothetical ... 28 6.7
Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 28 8.9
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 28 8.9
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 28 8.9
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 28 8.9
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 28 8.9
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 28 8.9
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 28 8.9
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 28 8.9
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 28 8.9
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 28 8.9
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 34.3 bits (75), Expect = 0.10
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = -1
Query: 500 KKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSD 321
K+ QE + + I KVL R ++S+E D N+E + ++ +E EL +EKN
Sbjct: 1232 KELQEAKSEIGRLVEIEKVLNNR-ILSLE------DQNLELEERLQEMEEELLDEKNKKK 1284
Query: 320 QVTSENRQLIEEN 282
+V ++ Q EEN
Sbjct: 1285 EVDAKVEQKSEEN 1297
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = -1
Query: 374 AKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITV--NP 201
AKI LEA+L+N Q + N +L++ +L Q+++ Q T++ + G+
Sbjct: 1711 AKIAELEAQLQNPAEEDQQQKTSNVELVKLRQQLANAQQDMRVQNLTISDREGLIAEYRH 1770
Query: 200 QIGRDDRAPAELNERFRS 147
QI + EL+ + ++
Sbjct: 1771 QIAEQTKTIEELHLKLKT 1788
>U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical
protein C27A2.4 protein.
Length = 678
Score = 34.3 bits (75), Expect = 0.10
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Frame = -1
Query: 527 NAVVTCKFYKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIV-ALEA 351
N + C+ K Q +++YKNI++ + S+ S + IN +N +I L
Sbjct: 142 NVMCKCQRRSKLQNMAKNLEEYKNIVEHPKVNSLFSKLSEHTGEVINADNFWRIPDTLRC 201
Query: 350 ELKNEKNHSDQVTS-ENRQLIEENTRLNEQVQELQRQVRTLAPQRGITVNPQIGRDDRAP 174
E +N ++ T + L++E LN ++ + T + G+ V +I + P
Sbjct: 202 EKQNFPCEFEKKTPWYSEGLLDELEVLNTKINRFTSGLYTSKSENGVDVGKEIQKLRSGP 261
Query: 173 --AELNERFRS 147
+E+ ER ++
Sbjct: 262 LVSEIFERMKN 272
>Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical
protein K04G11.3 protein.
Length = 368
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Frame = -1
Query: 479 PAVQQYKNIIKVLQERSVISVENS-----DNNCDINMENQAKIVALEAELKNEKNHSDQV 315
P ++ N +K+LQ+ + I+++NS D + + + E E+ K ++
Sbjct: 207 PTYKELSNTVKLLQQEN-INLKNSVQTRKDQFSQLYAQKERYESTNEIEINRLKKCVEEE 265
Query: 314 TSENRQLIEENTRL-NEQV 261
NRQLI ENTRL EQV
Sbjct: 266 IELNRQLIAENTRLATEQV 284
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = -1
Query: 395 DINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTLA 228
DIN + +I L+ EL K S ++ S++R+ +EE +++ L+ Q+RT+A
Sbjct: 669 DINQKQMKEIKLLKDELDRLKTVSAEILSKSREEVEER---QKKIFMLEEQIRTIA 721
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = -1
Query: 395 DINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTLA 228
DIN + +I L+ EL K S ++ S++R+ +EE +++ L+ Q+RT+A
Sbjct: 669 DINQKQMKEIKLLKDELDRLKTVSAEILSKSREEVEER---QKKIFMLEEQIRTIA 721
>Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 32.3 bits (70), Expect = 0.41
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = -1
Query: 407 DNNCDIN-MENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTL 231
DNN DI +EN + + K + +S+Q+ S+N E + +E+V E + + + +
Sbjct: 606 DNNNDIQQIENNYVVKTISRHSKRKTGNSEQLGSDN---TSEASESDEEVIEPKIKKKEI 662
Query: 230 APQRGITVNPQIGRDDRAPAELNERF 153
P + + P++ D+R E+ +F
Sbjct: 663 VPAKSKPITPEVA-DERI-KEMERKF 686
>Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 32.3 bits (70), Expect = 0.41
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = -1
Query: 407 DNNCDIN-MENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTL 231
DNN DI +EN + + K + +S+Q+ S+N E + +E+V E + + + +
Sbjct: 606 DNNNDIQQIENNYVVKTISRHSKRKTGNSEQLGSDN---TSEASESDEEVIEPKIKKKEI 662
Query: 230 APQRGITVNPQIGRDDRAPAELNERF 153
P + + P++ D+R E+ +F
Sbjct: 663 VPAKSKPITPEVA-DERI-KEMERKF 686
>Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical
protein ZK1086.1b protein.
Length = 770
Score = 32.3 bits (70), Expect = 0.41
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = -1
Query: 407 DNNCDIN-MENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTL 231
DNN DI +EN + + K + +S+Q+ S+N E + +E+V E + + + +
Sbjct: 643 DNNNDIQQIENNYVVKTISRHSKRKTGNSEQLGSDN---TSEASESDEEVIEPKIKKKEI 699
Query: 230 APQRGITVNPQIGRDDRAPAELNERF 153
P + + P++ D+R E+ +F
Sbjct: 700 VPAKSKPITPEVA-DERI-KEMERKF 723
>Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical
protein Y49E10.23a protein.
Length = 734
Score = 31.9 bits (69), Expect = 0.54
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = -1
Query: 488 ERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTS 309
+RV + + + + E + +EN + ++ KIV L+ +L + +
Sbjct: 556 DRVTSTSREEEVSSAAGEEAK-RIENEEQKLNMQQIMIDKIVILQRKLARRTEKCEFLEE 614
Query: 308 ENRQLIEENTRLNEQVQE--LQRQVRTLAPQRGITVNPQIGRDDRAPAELNERFRS 147
RQ +EE + + +Q L+ + L P G IGR A A + F S
Sbjct: 615 HVRQCLEELQKKTKIIQHFALREEASLLMPSEGSLEKVPIGRKSAAYALMGAMFTS 670
>U64848-14|AAB04890.1| 382|Caenorhabditis elegans Hypothetical
protein C50E3.12 protein.
Length = 382
Score = 31.9 bits (69), Expect = 0.54
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = -1
Query: 317 VTSENRQLIEENTRLNEQVQELQRQVRTL-APQ-------RGITVNPQIGRDDRAPAELN 162
+ NRQ +E TR++ +Q+++++VR + APQ R + RD +PAE
Sbjct: 252 LNESNRQRSDERTRISRDLQQIEQEVREIAAPQAVANQRYRRANAPDNLRRDQPSPAEDP 311
Query: 161 ERFRSLVYSTISELFIEN 108
E +L+ E EN
Sbjct: 312 EGLGALMTPDEGENLEEN 329
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -1
Query: 653 CDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKMWRSLKPNAVVTCKFYKK 495
C H FC+ C+ D S CP+C V M + + N + F KK
Sbjct: 54 CGHTFCYSCLFDWLK-------SQDTCPMCREAVNMTQEIPTNVEILAVFEKK 99
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 31.5 bits (68), Expect = 0.72
Identities = 23/119 (19%), Positives = 55/119 (46%)
Frame = -1
Query: 500 KKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSD 321
KKT + + +++ +++ ++ ++ D+N + A A+L EK H +
Sbjct: 954 KKTDQELSDTKKHVQDLELSLRKAEQEKQSRDHNIRSLQDEMANQDEAVAKLNKEKKHQE 1013
Query: 320 QVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNERFRSL 144
+ NR+L E+ ++V L++ +R Q+ + I R+ R+ ++ + R +
Sbjct: 1014 E---SNRKLNEDLQSEEDKVNHLEK-IRNKLEQQMDELEENIDREKRSRGDIEKAKRKV 1068
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 31.5 bits (68), Expect = 0.72
Identities = 23/119 (19%), Positives = 55/119 (46%)
Frame = -1
Query: 500 KKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSD 321
KKT + + +++ +++ ++ ++ D+N + A A+L EK H +
Sbjct: 954 KKTDQELSDTKKHVQDLELSLRKAEQEKQSRDHNIRSLQDEMANQDEAVAKLNKEKKHQE 1013
Query: 320 QVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNERFRSL 144
+ NR+L E+ ++V L++ +R Q+ + I R+ R+ ++ + R +
Sbjct: 1014 E---SNRKLNEDLQSEEDKVNHLEK-IRNKLEQQMDELEENIDREKRSRGDIEKAKRKV 1068
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 31.5 bits (68), Expect = 0.72
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 653 CDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVK 549
C H FC +C+ ++Q N N PH + CP C + K
Sbjct: 41 CGHTFCTECIRNVQ-NYGNSPH--LECPTCRAETK 72
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 31.5 bits (68), Expect = 0.72
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = -1
Query: 422 SVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQR 246
S+E + N + + A+I L+ ++N + D V +ENT+L +++QE+Q+
Sbjct: 815 SIEELNRNSTASCTSNAEIARLQVSIRNSQIQEDLVK-------QENTKLRDELQEMQK 866
>Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical
protein F54B11.5 protein.
Length = 201
Score = 31.1 bits (67), Expect = 0.95
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 653 CDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVK 549
C H FC +C+ +N M H CP+C T+++
Sbjct: 143 CLHAFCIRCI----ANEMEYRHDF-SCPICKTKIR 172
>AF106583-6|AAD03137.1| 233|Caenorhabditis elegans Hypothetical
protein F23C8.9 protein.
Length = 233
Score = 31.1 bits (67), Expect = 0.95
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = -1
Query: 440 QERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQV 261
Q+ +I SDN+ D+ + K V E +EK SDQ T+E + +EE R+ E+
Sbjct: 148 QKNGIIDDGASDNDDDLFKDLPEKEVTTEKAKNSEK--SDQKTAEIDENVEEEYRMMEEE 205
Query: 260 QELQRQ 243
+ + Q
Sbjct: 206 RLREEQ 211
>Z48544-4|CAA88443.3| 250|Caenorhabditis elegans Hypothetical
protein ZK945.5 protein.
Length = 250
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/103 (24%), Positives = 42/103 (40%)
Frame = -1
Query: 680 LVLFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKMWRSLKPNAVVTCKFY 501
L++ I T C H C C ++ + SI+ CP + ++W+ V K
Sbjct: 23 LLIPRILTECGHTICTGCAGKIKGQS-----SIIACPFDRIETRIWK----KDVTRLKKN 73
Query: 500 KKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQA 372
E V+ KN +V+ E++ N + CD N + A
Sbjct: 74 FSILEIKQEVKDRKN--RVISEKNEKKERNKNGVCDENTNHHA 114
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 391 MSQLLSLFSTLITLRSCSTLIMFL 462
++QL S+FS LITL SC+ LI+ L
Sbjct: 307 LNQLASIFSMLITLNSCTHLIICL 330
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/84 (23%), Positives = 39/84 (46%)
Frame = -1
Query: 473 VQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQL 294
+++ ++ L+ + S S+ N + +QA I L +E+K + + + EN L
Sbjct: 515 IKEISDLENQLEAAKLESGSTSEPNAQLEA-SQATIQELTSEMKMQLEEVKRQSDENNSL 573
Query: 293 IEENTRLNEQVQELQRQVRTLAPQ 222
T NE++ EL + +A Q
Sbjct: 574 NVHLTSSNEKIAELTSSLEMVAAQ 597
>Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical
protein F20C5.5 protein.
Length = 688
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = -1
Query: 461 KNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEEN 282
KN+ + + V S+EN D+ + +E Q + L +ELK +KN ++ E+ + +++
Sbjct: 268 KNLESLNPSQLVTSLENKDDYLLVTVEFQKRKNILFSELK-KKNEEIKMLQESFNVYQKD 326
Query: 281 T--RLNEQVQELQRQVRTL 231
+ ++ E+ ELQ Q T+
Sbjct: 327 SIEKVMEKFLELQHQNLTV 345
>U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical
protein F48E3.9 protein.
Length = 272
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = -1
Query: 506 FYKKTQE-RVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKN 330
+ ++T+E + + K I KV++E S + EN+ + ++ + ELK +N
Sbjct: 113 YIQQTREYELTQINDKKLIDKVIEENSSLIKENAKVSTKLSRLESVDYTYKQRELKEAQN 172
Query: 329 HSDQVTSENRQLIEENTRLNEQVQELQ 249
+SD V L +E + + + +++
Sbjct: 173 NSDLVLELKAALQQEKSSSHGMLNKIE 199
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 1/121 (0%)
Frame = -1
Query: 590 HSIVCCPLCNTQVKMWRSLKPNAVV-TCKFYKKTQERVPAVQQYKNIIKVLQERSVISVE 414
H + C + +T++K+W VV T +K V + + +R V +
Sbjct: 289 HLFLSCSM-DTKIKLWEVYDRQRVVRTYAGHKLPVREVAFNNEGTEFLSASFDRYVKLWD 347
Query: 413 NSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRT 234
L+ ++KNH V +N+++I+ ++R E VQE R ++
Sbjct: 348 TETGQVKQRFHTGHVPYCLKYHPDDDKNHMFLVGMQNKKIIQWDSRSGEIVQEYDRHLQA 407
Query: 233 L 231
+
Sbjct: 408 V 408
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = -1
Query: 419 VENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLI----EENTRLNEQVQEL 252
V N D + + E +++I ALEAEL K V + +++ EN L +V L
Sbjct: 363 VANQDKSSKMIGELRSRIAALEAELLEFKQGRRTVDVDGHEVVNDQYHENVYLTSEVNHL 422
Query: 251 QRQVRTL 231
+ +V+ L
Sbjct: 423 RFRVKAL 429
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = -1
Query: 419 VENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLI----EENTRLNEQVQEL 252
V N D + + E +++I ALEAEL K V + +++ EN L +V L
Sbjct: 363 VANQDKSSKMIGELRSRIAALEAELLEFKQGRRTVDVDGHEVVNDQYHENVYLTSEVNHL 422
Query: 251 QRQVRTL 231
+ +V+ L
Sbjct: 423 RFRVKAL 429
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = -1
Query: 419 VENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLI----EENTRLNEQVQEL 252
V N D + + E +++I ALEAEL K V + +++ EN L +V L
Sbjct: 363 VANQDKSSKMIGELRSRIAALEAELLEFKQGRRTVDVDGHEVVNDQYHENVYLTSEVNHL 422
Query: 251 QRQVRTL 231
+ +V+ L
Sbjct: 423 RFRVKAL 429
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = -1
Query: 419 VENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLI----EENTRLNEQVQEL 252
V N D + + E +++I ALEAEL K V + +++ EN L +V L
Sbjct: 363 VANQDKSSKMIGELRSRIAALEAELLEFKQGRRTVDVDGHEVVNDQYHENVYLTSEVNHL 422
Query: 251 QRQVRTL 231
+ +V+ L
Sbjct: 423 RFRVKAL 429
>Z80221-1|CAB02309.1| 690|Caenorhabditis elegans Hypothetical
protein ZC247.2 protein.
Length = 690
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = -1
Query: 545 WRSLKPNAVVTCKFYKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDI----NMEN 378
W + A Y+ ERV + +N+ ++ + +I +E+ + + N
Sbjct: 579 WEPVAKLAKKAASHYRGNLERVMEERMGENL-RLKAAQRIIRLESFVVDAQVAKLEKESN 637
Query: 377 QAKI-VALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTLA 228
+AK V E + ++KN Q+ +NR++ RL +V+ L+++ +TLA
Sbjct: 638 KAKEDVRWEIDQLHQKN--SQLRKDNREMKANQMRLEARVEALEQKFKTLA 686
>Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical
protein F08G12.5 protein.
Length = 185
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Frame = -1
Query: 656 TCDHGFCFKCVIDL-QSNAMNIP----HSIVCCPLCNTQVKM 546
TC H FC +C+ ++ S MN + CP+C +V M
Sbjct: 55 TCGHSFCHRCIEEVAHSEVMNDTREPNRNSFHCPICRKRVSM 96
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Frame = -1
Query: 374 AKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQ-------RQVRTLAPQRG 216
AK E EL+ K +DQ+ E T L +Q+Q+++ ++R L QR
Sbjct: 163 AKYAKTEVELQRLKVDNDQLNDERIASNTTVTMLTKQIQDIENDRIHFLNKIRELNEQRV 222
Query: 215 ITVNPQIGRDDRAPAELNERFRSLVYSTISEL 120
+N ++ +++ N R + ++ S + ++
Sbjct: 223 DFLNAEVALEEK---RRNSRIQDMITSAVQDI 251
>U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical
protein F46H5.7b protein.
Length = 575
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -1
Query: 401 NCDINMENQAKIV-ALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQ 243
N D + E ++ V ALE +L N Q +E +QL E N NE+V +L+++
Sbjct: 289 NSDAHEEVKSTAVRALEVKLGLANNSIRQAEAEKQQLQEANWYANERVGKLEQE 342
>U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical
protein F46H5.7a protein.
Length = 572
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -1
Query: 401 NCDINMENQAKIV-ALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQ 243
N D + E ++ V ALE +L N Q +E +QL E N NE+V +L+++
Sbjct: 289 NSDAHEEVKSTAVRALEVKLGLANNSIRQAEAEKQQLQEANWYANERVGKLEQE 342
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = -1
Query: 419 VENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLI----EENTRLNEQVQEL 252
V N D + + E +++I ALEAEL K V + +++ EN L +V L
Sbjct: 367 VANQDKSSKMIGELRSRIAALEAELLEFKQGRRTVDVDGHEVVNDQYHENVYLTSEVNHL 426
Query: 251 QRQVRTL 231
+ +V+ L
Sbjct: 427 RFRVKAL 433
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/91 (19%), Positives = 45/91 (49%)
Frame = -1
Query: 452 IKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRL 273
IK + E E + N + M + K + + K EK D+ +++ E +
Sbjct: 228 IKEMAETERKEKEKVEKN-KMEMTEKIKKKDEDEKAKKEKERIDKEEKIKKEVEEAEKKK 286
Query: 272 NEQVQELQRQVRTLAPQRGITVNPQIGRDDR 180
E+ ++ +++V+ ++ +++NP++ R+D+
Sbjct: 287 KEEKEKRRKEVKKNREEQ-LSINPEMSRNDK 316
>U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical
protein C28G1.5 protein.
Length = 101
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 656 TCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNT 558
TC H C KC+ + +N S V CP C T
Sbjct: 26 TCGHALCHKCITAMVNN------STVECPFCRT 52
>AL021483-5|CAA16346.1| 255|Caenorhabditis elegans Hypothetical
protein Y38H8A.2a protein.
Length = 255
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 653 CDHGFCFKCVIDLQSNAMNIPHSIVCCPL 567
C HG+C KC+ +++ +A H++ CP+
Sbjct: 79 CGHGYCKKCIPNIKKDA----HTLTKCPV 103
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 377 QAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQE 255
Q I + E+ N K + S +L EENTRL + +Q+
Sbjct: 153 QEVITENDLEVNNMKKEKNNTKSSIEKLTEENTRLTKALQD 193
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 377 QAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQE 255
Q I + E+ N K + S +L EENTRL + +Q+
Sbjct: 155 QEVITENDLEVNNMKKEKNNTKSSIEKLTEENTRLTKALQD 195
>U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical
protein C43G2.2 protein.
Length = 869
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 359 LEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQ 249
L AELK K ++ SE +L EEN L + V L+
Sbjct: 150 LRAELKETKEREQRLISEYSELEEENIGLQKTVANLR 186
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -1
Query: 317 VTSENRQLIEENTRLNEQVQELQRQVRTLA 228
+++ENRQL EEN+ L E QV TLA
Sbjct: 173 LSNENRQLREENSTLKLLYNENTAQVNTLA 202
>AF038615-1|AAB94149.3| 532|Caenorhabditis elegans Hypothetical
protein R02D3.3 protein.
Length = 532
Score = 28.7 bits (61), Expect = 5.1
Identities = 26/121 (21%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Frame = -1
Query: 545 WRSLKPNAVVTCKFYKKTQERV----PAVQQYKNIIKVLQERSVISVENSDNNCDINMEN 378
WR V TCKF + +RV + Q + I+K + + + + S + D+ E
Sbjct: 38 WRDNASPEVFTCKFIRINGQRVSPPHKSKVQLQLILKNEDQATFVFLNPSASKEDLVKER 97
Query: 377 QAKIVALEAELKNEKNHSDQ----VTSENRQL-IEENTRLNEQVQELQRQVRTLAPQRGI 213
A AL++ L ++ ++ V S+++Q+ ++ ++ ++ + L++ + L + I
Sbjct: 98 DAVKEALQSALVKHRHRVNELAKSVESQSKQVELQAKQKILQEDRNLEKLYQNLVATKLI 157
Query: 212 T 210
T
Sbjct: 158 T 158
>AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical
protein Y18H1A.2 protein.
Length = 270
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = -1
Query: 437 ERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQ 258
+R + E D + E +AK + + K +K H + +SE RQL EE R Q
Sbjct: 151 KRKELEEERKRKREDSDSEEKAKKRHKKDKKKKKKKHRHRDSSEERQLEEEYDRERRQKL 210
Query: 257 ELQRQVR 237
R R
Sbjct: 211 ASMRDER 217
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -1
Query: 668 LIPTT---CDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKMWRSLKPNAVVTCK 507
++PTT C H FCF C+ + N M CP+C + +P+ V+ K
Sbjct: 20 IVPTTIPACGHKFCFICLKGVYMNDMG------GCPMCRGPIDSNIFAQPSQVLDLK 70
>Z70751-4|CAI91168.1| 497|Caenorhabditis elegans Hypothetical
protein F11A3.2b protein.
Length = 497
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 344 KNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTL 231
K K HS + +LIEEN +L + ++L ++ TL
Sbjct: 79 KPPKEHSAVPSESTTKLIEENAQLTKTTEQLAAKMETL 116
>Z70751-3|CAA94752.1| 529|Caenorhabditis elegans Hypothetical
protein F11A3.2a protein.
Length = 529
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 344 KNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTL 231
K K HS + +LIEEN +L + ++L ++ TL
Sbjct: 111 KPPKEHSAVPSESTTKLIEENAQLTKTTEQLAAKMETL 148
>Z70750-18|CAI91163.1| 497|Caenorhabditis elegans Hypothetical
protein F11A3.2b protein.
Length = 497
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 344 KNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTL 231
K K HS + +LIEEN +L + ++L ++ TL
Sbjct: 79 KPPKEHSAVPSESTTKLIEENAQLTKTTEQLAAKMETL 116
>Z70750-17|CAA94749.1| 529|Caenorhabditis elegans Hypothetical
protein F11A3.2a protein.
Length = 529
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 344 KNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTL 231
K K HS + +LIEEN +L + ++L ++ TL
Sbjct: 111 KPPKEHSAVPSESTTKLIEENAQLTKTTEQLAAKMETL 148
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 28.3 bits (60), Expect = 6.7
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Frame = -1
Query: 449 KVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTR-- 276
+ +QERS++ ENS N E + + L+ E++ K S++V + ++L ENTR
Sbjct: 74 ETMQERSIVLEENSRQN-----EERDR---LQKEIEKMKEDSEEVAALKQKL--ENTRRL 123
Query: 275 LNEQVQE-LQRQVRTLAPQRGITVNPQIGRDDRAPAELNERFRSLVYSTISELFIENRVH 99
L ++E Q R A +T Q G R E +E R +T + H
Sbjct: 124 LKVNMEETAQANARKEAAIARLTEAEQNGA--RITEERDEALRKCQQTTGDAIVDIWNTH 181
Query: 98 SIQ 90
S+Q
Sbjct: 182 SVQ 184
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/78 (23%), Positives = 37/78 (47%)
Frame = -1
Query: 359 LEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITVNPQIGRDDR 180
L+ ++ E + + R +E++ L +Q E++R + R +VNP++ DD
Sbjct: 1642 LKGQMDLESEDPEVIQMIVRHRMEQHKLLEKQRVEIERLRSKIRVPRATSVNPEMIGDDE 1701
Query: 179 APAELNERFRSLVYSTIS 126
A L +L +++S
Sbjct: 1702 ADTTLTALQSALGNASLS 1719
>Z49071-6|CAA88876.2| 292|Caenorhabditis elegans Hypothetical
protein T22C8.4 protein.
Length = 292
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -1
Query: 581 VCCPLCNTQVKMWRSLKPNAVVTCKFYKKTQERVPAVQQYKNIIKVLQERSV 426
V CP+CN +K +LK + K+ ++ + Y + ++ LQE +V
Sbjct: 186 VYCPMCNAPIKYKYNLKQHMNKCQPSQKEMEQGSMLAKAYPDYLRQLQEAAV 237
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Frame = -1
Query: 500 KKTQERVPAVQQYKNIIKV-LQERSVISVENSDNNCDINMENQAKIVALEAELKN----E 336
K+ E+V +Q+ ++ L + + ++ + D+ E++ ++ LE L+ E
Sbjct: 345 KEAWEKVEQLQEMLGELEAELDRQKELKLQLEKDMEDLRKEHEGQMAELEKRLEKVSEKE 404
Query: 335 KNHSDQ---VTSENRQLIEENTRLNEQVQEL 252
K +Q + EN+ +++EN L+E Q L
Sbjct: 405 KEAIEQLEKIQKENKTIVKENVYLSESKQVL 435
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Frame = -1
Query: 500 KKTQERVPAVQQYKNIIKV-LQERSVISVENSDNNCDINMENQAKIVALEAELKN----E 336
K+ E+V +Q+ ++ L + + ++ + D+ E++ ++ LE L+ E
Sbjct: 345 KEAWEKVEQLQEMLGELEAELDRQKELKLQLEKDMEDLRKEHEGQMAELEKRLEKVSEKE 404
Query: 335 KNHSDQ---VTSENRQLIEENTRLNEQVQEL 252
K +Q + EN+ +++EN L+E Q L
Sbjct: 405 KEAIEQLEKIQKENKTIVKENVYLSESKQVL 435
>AF000196-1|AAC24252.1| 158|Caenorhabditis elegans Hypothetical
protein B0041.3 protein.
Length = 158
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = -1
Query: 572 PLCNTQVKMWRSLKPNAVVT-CKFYKKTQERVPAVQQYKNIIKVLQ--ERSVISVENSDN 402
P+ N+Q +LKP+ T CK T ERV + ++ K++ +LQ +R++ S DN
Sbjct: 93 PIFNSQQP---NLKPSLQETQCKIVPATTERVDSSREEKSMKDILQRIDRNIKSFRKCDN 149
>AC024818-4|AAF60782.5| 457|Caenorhabditis elegans Hypothetical
protein Y54H5A.4 protein.
Length = 457
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = -1
Query: 317 VTSENRQLIEENT--RLNEQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNERF--R 150
+TS L+EE + R+ E +Q + V T++PQ ++ +IG+ A++ F R
Sbjct: 78 ITSAETVLVEEQSFGRVYEGIQNSKLSVVTVSPQAITSIAVKIGKSTNEVAKIIASFFRR 137
Query: 149 SLVYSTISELFIENRVHSI 93
V I F HS+
Sbjct: 138 LGVKYVIDSSFARKFAHSL 156
>Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical
protein F23A7.7 protein.
Length = 965
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 569 LCNTQVKMWRSLKPNAVVTCKFYKKTQERVPAVQQYKNIIKVLQERSV 426
LC+ + +M RSL + T F T AV +Y + V QER+V
Sbjct: 118 LCDERSQMLRSLSNQNLRTIFFLISTTNSKAAVMRYLDFHSVPQERTV 165
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -1
Query: 653 CDHGFCFKCVIDLQSNAMNIPHSI-VCCPLC 564
C H FC +CV+ S N + CP C
Sbjct: 82 CGHTFCTRCVVGCSSTMNNTSEEFGIKCPEC 112
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 27.9 bits (59), Expect = 8.9
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Frame = -1
Query: 419 VEN--SDNNCDINMENQAKIVALEAELKNEK-NHSDQVTSENRQLIEEN-------TRLN 270
VEN +N+ ++M+N IV KN+ N D++ SEN L +EN ++
Sbjct: 336 VENLIKENSELLDMKNALNIV------KNDLINQVDELNSENMILRDENLSRQMVSEKMQ 389
Query: 269 EQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNERF 153
EQ+ + + +++TL + N Q +D P + +RF
Sbjct: 390 EQITKHEEEIKTLKQKLMEKENEQ--EEDDVPMAMRKRF 426
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 27.9 bits (59), Expect = 8.9
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Frame = -1
Query: 419 VEN--SDNNCDINMENQAKIVALEAELKNEK-NHSDQVTSENRQLIEEN-------TRLN 270
VEN +N+ ++M+N IV KN+ N D++ SEN L +EN ++
Sbjct: 336 VENLIKENSELLDMKNALNIV------KNDLINQVDELNSENMILRDENLSRQMVSEKMQ 389
Query: 269 EQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNERF 153
EQ+ + + +++TL + N Q +D P + +RF
Sbjct: 390 EQITKHEEEIKTLKQKLMEKENEQ--EEDDVPMAMRKRF 426
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical
protein ZK1098.10a protein.
Length = 1139
Score = 27.9 bits (59), Expect = 8.9
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Frame = -1
Query: 419 VEN--SDNNCDINMENQAKIVALEAELKNEK-NHSDQVTSENRQLIEEN-------TRLN 270
VEN +N+ ++M+N IV KN+ N D++ SEN L +EN ++
Sbjct: 318 VENLIKENSELLDMKNALNIV------KNDLINQVDELNSENMILRDENLSRQMVSEKMQ 371
Query: 269 EQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNERF 153
EQ+ + + +++TL + N Q +D P + +RF
Sbjct: 372 EQITKHEEEIKTLKQKLMEKENEQ--EEDDVPMAMRKRF 408
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 27.9 bits (59), Expect = 8.9
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Frame = -1
Query: 497 KTQERVPA-VQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSD 321
K ER+ + + ++ + I+ L ++ VE + QA+I L A L++
Sbjct: 1622 KKHERLQSDIDKFADTIRALATKAHKFVEEKSPLTEQIQVRQAQIEKLYAGLQD------ 1675
Query: 320 QVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNERFRSLV 141
++ E R+ +EE L +E+ ++ +A + + + + G+D L ERF+
Sbjct: 1676 -LSKERRKRLEETLELYALHREIDDLLQWIADKEVVAGSQENGQDYEHVQMLQERFQQFA 1734
Query: 140 YST 132
T
Sbjct: 1735 RDT 1737
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 27.9 bits (59), Expect = 8.9
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Frame = -1
Query: 497 KTQERVPA-VQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSD 321
K ER+ + + ++ + I+ L ++ VE + QA+I L A L++
Sbjct: 1622 KKHERLQSDIDKFADTIRALATKAHKFVEEKSPLTEQIQVRQAQIEKLYAGLQD------ 1675
Query: 320 QVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNERFRSLV 141
++ E R+ +EE L +E+ ++ +A + + + + G+D L ERF+
Sbjct: 1676 -LSKERRKRLEETLELYALHREIDDLLQWIADKEVVAGSQENGQDYEHVQMLQERFQQFA 1734
Query: 140 YST 132
T
Sbjct: 1735 RDT 1737
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -1
Query: 371 KIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQVRTL 231
K + E ELK +N D + S Q+I+ + + + RQV L
Sbjct: 630 KHINFEQELKANENRLDDIRSTGEQIIDSGHFAADHIGDRLRQVNNL 676
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 27.9 bits (59), Expect = 8.9
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Frame = -1
Query: 419 VEN--SDNNCDINMENQAKIVALEAELKNEK-NHSDQVTSENRQLIEEN-------TRLN 270
VEN +N+ ++M+N IV KN+ N D++ SEN L +EN ++
Sbjct: 336 VENLIKENSELLDMKNALNIV------KNDLINQVDELNSENMILRDENLSRQMVSEKMQ 389
Query: 269 EQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNERF 153
EQ+ + + +++TL + N Q +D P + +RF
Sbjct: 390 EQITKHEEEIKTLKQKLMEKENEQ--EEDDVPMAMRKRF 426
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 27.9 bits (59), Expect = 8.9
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Frame = -1
Query: 497 KTQERVPA-VQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSD 321
K ER+ + + ++ + I+ L ++ VE + QA+I L A L++
Sbjct: 1622 KKHERLQSDIDKFADTIRALATKAHKFVEEKSPLTEQIQVRQAQIEKLYAGLQD------ 1675
Query: 320 QVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNERFRSLV 141
++ E R+ +EE L +E+ ++ +A + + + + G+D L ERF+
Sbjct: 1676 -LSKERRKRLEETLELYALHREIDDLLQWIADKEVVAGSQENGQDYEHVQMLQERFQQFA 1734
Query: 140 YST 132
T
Sbjct: 1735 RDT 1737
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 27.9 bits (59), Expect = 8.9
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Frame = -1
Query: 497 KTQERVPA-VQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSD 321
K ER+ + + ++ + I+ L ++ VE + QA+I L A L++
Sbjct: 1622 KKHERLQSDIDKFADTIRALATKAHKFVEEKSPLTEQIQVRQAQIEKLYAGLQD------ 1675
Query: 320 QVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNERFRSLV 141
++ E R+ +EE L +E+ ++ +A + + + + G+D L ERF+
Sbjct: 1676 -LSKERRKRLEETLELYALHREIDDLLQWIADKEVVAGSQENGQDYEHVQMLQERFQQFA 1734
Query: 140 YST 132
T
Sbjct: 1735 RDT 1737
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 27.9 bits (59), Expect = 8.9
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Frame = -1
Query: 497 KTQERVPA-VQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSD 321
K ER+ + + ++ + I+ L ++ VE + QA+I L A L++
Sbjct: 1622 KKHERLQSDIDKFADTIRALATKAHKFVEEKSPLTEQIQVRQAQIEKLYAGLQD------ 1675
Query: 320 QVTSENRQLIEENTRLNEQVQELQRQVRTLAPQRGITVNPQIGRDDRAPAELNERFRSLV 141
++ E R+ +EE L +E+ ++ +A + + + + G+D L ERF+
Sbjct: 1676 -LSKERRKRLEETLELYALHREIDDLLQWIADKEVVAGSQENGQDYEHVQMLQERFQQFA 1734
Query: 140 YST 132
T
Sbjct: 1735 RDT 1737
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,711,926
Number of Sequences: 27780
Number of extensions: 350675
Number of successful extensions: 1464
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1458
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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