Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16h12
(787 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016166-1|AAV37051.1| 930|Drosophila melanogaster AT02824p pro... 29 5.4
BT012322-1|AAS77447.1| 820|Drosophila melanogaster AT28002p pro... 29 5.4
BT011414-1|AAR96206.1| 753|Drosophila melanogaster AT18471p pro... 29 5.4
BT011402-1|AAR96194.1| 932|Drosophila melanogaster AT24447p pro... 29 5.4
AY118944-1|AAM50804.1| 941|Drosophila melanogaster LD29915p pro... 29 5.4
AF255673-1|AAG18328.1| 1011|Drosophila melanogaster rho guanine ... 29 5.4
AE014296-79|AAN11436.1| 925|Drosophila melanogaster CG1225-PC, ... 29 5.4
AE014296-78|AAN11435.1| 930|Drosophila melanogaster CG1225-PE, ... 29 5.4
AE014296-77|AAN11434.1| 932|Drosophila melanogaster CG1225-PB, ... 29 5.4
AE014296-76|AAF47374.1| 1011|Drosophila melanogaster CG1225-PA, ... 29 5.4
>BT016166-1|AAV37051.1| 930|Drosophila melanogaster AT02824p
protein.
Length = 930
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 435 HIHM*RFLMQNIVDSFN*NVILKSQNLSNKSGSLVLFDNVKDYTKR 572
H+H RF +Q VD+ + QNL N S +L LFDN Y KR
Sbjct: 670 HLHSARFFLQ--VDATR-----QKQNLWNSSYTLFLFDNQLVYCKR 708
>BT012322-1|AAS77447.1| 820|Drosophila melanogaster AT28002p
protein.
Length = 820
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 435 HIHM*RFLMQNIVDSFN*NVILKSQNLSNKSGSLVLFDNVKDYTKR 572
H+H RF +Q VD+ + QNL N S +L LFDN Y KR
Sbjct: 560 HLHSARFFLQ--VDATR-----QKQNLWNSSYTLFLFDNQLVYCKR 598
>BT011414-1|AAR96206.1| 753|Drosophila melanogaster AT18471p
protein.
Length = 753
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 435 HIHM*RFLMQNIVDSFN*NVILKSQNLSNKSGSLVLFDNVKDYTKR 572
H+H RF +Q VD+ + QNL N S +L LFDN Y KR
Sbjct: 493 HLHSARFFLQ--VDATR-----QKQNLWNSSYTLFLFDNQLVYCKR 531
>BT011402-1|AAR96194.1| 932|Drosophila melanogaster AT24447p
protein.
Length = 932
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 435 HIHM*RFLMQNIVDSFN*NVILKSQNLSNKSGSLVLFDNVKDYTKR 572
H+H RF +Q VD+ + QNL N S +L LFDN Y KR
Sbjct: 672 HLHSARFFLQ--VDATR-----QKQNLWNSSYTLFLFDNQLVYCKR 710
>AY118944-1|AAM50804.1| 941|Drosophila melanogaster LD29915p
protein.
Length = 941
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 435 HIHM*RFLMQNIVDSFN*NVILKSQNLSNKSGSLVLFDNVKDYTKR 572
H+H RF +Q VD+ + QNL N S +L LFDN Y KR
Sbjct: 751 HLHSARFFLQ--VDATR-----QKQNLWNSSYTLFLFDNQLVYCKR 789
>AF255673-1|AAG18328.1| 1011|Drosophila melanogaster rho guanine
nucleotide exchangefactor 3 protein.
Length = 1011
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 435 HIHM*RFLMQNIVDSFN*NVILKSQNLSNKSGSLVLFDNVKDYTKR 572
H+H RF +Q VD+ + QNL N S +L LFDN Y KR
Sbjct: 751 HLHSARFFLQ--VDATR-----QKQNLWNSSYTLFLFDNQLVYCKR 789
>AE014296-79|AAN11436.1| 925|Drosophila melanogaster CG1225-PC,
isoform C protein.
Length = 925
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 435 HIHM*RFLMQNIVDSFN*NVILKSQNLSNKSGSLVLFDNVKDYTKR 572
H+H RF +Q VD+ + QNL N S +L LFDN Y KR
Sbjct: 665 HLHSARFFLQ--VDATR-----QKQNLWNSSYTLFLFDNQLVYCKR 703
>AE014296-78|AAN11435.1| 930|Drosophila melanogaster CG1225-PE,
isoform E protein.
Length = 930
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 435 HIHM*RFLMQNIVDSFN*NVILKSQNLSNKSGSLVLFDNVKDYTKR 572
H+H RF +Q VD+ + QNL N S +L LFDN Y KR
Sbjct: 670 HLHSARFFLQ--VDATR-----QKQNLWNSSYTLFLFDNQLVYCKR 708
>AE014296-77|AAN11434.1| 932|Drosophila melanogaster CG1225-PB,
isoform B protein.
Length = 932
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 435 HIHM*RFLMQNIVDSFN*NVILKSQNLSNKSGSLVLFDNVKDYTKR 572
H+H RF +Q VD+ + QNL N S +L LFDN Y KR
Sbjct: 672 HLHSARFFLQ--VDATR-----QKQNLWNSSYTLFLFDNQLVYCKR 710
>AE014296-76|AAF47374.1| 1011|Drosophila melanogaster CG1225-PA,
isoform A protein.
Length = 1011
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 435 HIHM*RFLMQNIVDSFN*NVILKSQNLSNKSGSLVLFDNVKDYTKR 572
H+H RF +Q VD+ + QNL N S +L LFDN Y KR
Sbjct: 751 HLHSARFFLQ--VDATR-----QKQNLWNSSYTLFLFDNQLVYCKR 789
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,352,251
Number of Sequences: 53049
Number of extensions: 653079
Number of successful extensions: 1264
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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