Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16h02
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98048-3|CAB10844.1| 369|Homo sapiens suppression of tumorigeni... 38 0.041
U28918-1|AAB38382.1| 369|Homo sapiens p48 protein. 38 0.041
U17714-1|AAC97526.1| 369|Homo sapiens putative tumor suppressor... 38 0.041
CR456586-1|CAG30472.1| 369|Homo sapiens ST13 protein. 38 0.041
BC139724-1|AAI39725.1| 369|Homo sapiens suppression of tumorige... 38 0.041
BC071629-1|AAH71629.1| 369|Homo sapiens suppression of tumorige... 38 0.041
BC052982-1|AAH52982.1| 369|Homo sapiens suppression of tumorige... 38 0.041
AY826825-1|AAX18645.1| 255|Homo sapiens aging-associated protei... 38 0.041
AY513286-1|AAT08039.1| 369|Homo sapiens aging-associated protei... 38 0.041
AF512499-1|AAM44055.1| 369|Homo sapiens FAM10A5 protein. 38 0.041
AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens ... 34 0.67
>Z98048-3|CAB10844.1| 369|Homo sapiens suppression of
tumorigenicity 13 (colon carcinoma) (Hsp70 interacting
protein) protein.
Length = 369
Score = 37.9 bits (84), Expect = 0.041
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 785 AFKDVTSNPANFIKYQNNPKIAAVIA 708
AF+DV NPAN KYQ+NPK+ +I+
Sbjct: 334 AFQDVAQNPANMSKYQSNPKVMNLIS 359
>U28918-1|AAB38382.1| 369|Homo sapiens p48 protein.
Length = 369
Score = 37.9 bits (84), Expect = 0.041
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 785 AFKDVTSNPANFIKYQNNPKIAAVIA 708
AF+DV NPAN KYQ+NPK+ +I+
Sbjct: 334 AFQDVAQNPANMSKYQSNPKVMNLIS 359
>U17714-1|AAC97526.1| 369|Homo sapiens putative tumor suppressor
ST13 protein.
Length = 369
Score = 37.9 bits (84), Expect = 0.041
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 785 AFKDVTSNPANFIKYQNNPKIAAVIA 708
AF+DV NPAN KYQ+NPK+ +I+
Sbjct: 334 AFQDVAQNPANMSKYQSNPKVMNLIS 359
>CR456586-1|CAG30472.1| 369|Homo sapiens ST13 protein.
Length = 369
Score = 37.9 bits (84), Expect = 0.041
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 785 AFKDVTSNPANFIKYQNNPKIAAVIA 708
AF+DV NPAN KYQ+NPK+ +I+
Sbjct: 334 AFQDVAQNPANMSKYQSNPKVMNLIS 359
>BC139724-1|AAI39725.1| 369|Homo sapiens suppression of
tumorigenicity 13 (colon carcinoma) (Hsp70 interacting
protein) protein.
Length = 369
Score = 37.9 bits (84), Expect = 0.041
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 785 AFKDVTSNPANFIKYQNNPKIAAVIA 708
AF+DV NPAN KYQ+NPK+ +I+
Sbjct: 334 AFQDVAQNPANMSKYQSNPKVMNLIS 359
>BC071629-1|AAH71629.1| 369|Homo sapiens suppression of
tumorigenicity 13 (colon carcinoma) (Hsp70 interacting
protein) protein.
Length = 369
Score = 37.9 bits (84), Expect = 0.041
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 785 AFKDVTSNPANFIKYQNNPKIAAVIA 708
AF+DV NPAN KYQ+NPK+ +I+
Sbjct: 334 AFQDVAQNPANMSKYQSNPKVMNLIS 359
>BC052982-1|AAH52982.1| 369|Homo sapiens suppression of
tumorigenicity 13 (colon carcinoma) (Hsp70 interacting
protein) protein.
Length = 369
Score = 37.9 bits (84), Expect = 0.041
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 785 AFKDVTSNPANFIKYQNNPKIAAVIA 708
AF+DV NPAN KYQ+NPK+ +I+
Sbjct: 334 AFQDVAQNPANMSKYQSNPKVMNLIS 359
>AY826825-1|AAX18645.1| 255|Homo sapiens aging-associated protein
14b protein.
Length = 255
Score = 37.9 bits (84), Expect = 0.041
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 785 AFKDVTSNPANFIKYQNNPKIAAVIA 708
AF+DV NPAN KYQ+NPK+ +I+
Sbjct: 220 AFQDVAQNPANMSKYQSNPKVMNLIS 245
>AY513286-1|AAT08039.1| 369|Homo sapiens aging-associated protein 2
protein.
Length = 369
Score = 37.9 bits (84), Expect = 0.041
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 785 AFKDVTSNPANFIKYQNNPKIAAVIA 708
AF+DV NPAN KYQ+NPK+ +I+
Sbjct: 334 AFQDVAQNPANMSKYQSNPKVMNLIS 359
>AF512499-1|AAM44055.1| 369|Homo sapiens FAM10A5 protein.
Length = 369
Score = 37.9 bits (84), Expect = 0.041
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 785 AFKDVTSNPANFIKYQNNPKIAAVIA 708
AF+DV NPAN KYQ+NPK+ +I+
Sbjct: 334 AFQDVAQNPANMSKYQSNPKVMNLIS 359
>AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45488 fis, clone BRTHA2003759. ).
Length = 130
Score = 33.9 bits (74), Expect = 0.67
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = -2
Query: 320 FYFIS*YNFLTVFFFYYNCICFH*AGYIHAFETALYIVALLIVFTY*LMIIITY-SLFVH 144
F +I Y ++ V+ + Y I F+ YI+ + +YI L ++ Y + I TY +++H
Sbjct: 18 FIYIFIYIYIYVYVYIYLYIYFYIFTYIYLY-IFIYIYICLYIYLYIYLYIFTYIYIYLH 76
Query: 143 IIMVSES*YYVADSLLIVGY 84
I + Y+ L I Y
Sbjct: 77 IFIYLHIFIYICICLYIFIY 96
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,213,135
Number of Sequences: 237096
Number of extensions: 1407890
Number of successful extensions: 1948
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1947
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -