Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16h02
(789 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY274380-1|AAP31303.1| 363|Drosophila melanogaster Hsc-70-inter... 34 0.25
AY274379-1|AAP31302.1| 363|Drosophila melanogaster Hsc-70-inter... 34 0.25
AY274378-1|AAP31301.1| 363|Drosophila melanogaster Hsc-70-inter... 34 0.25
AY274377-1|AAP31300.1| 363|Drosophila melanogaster Hsc-70-inter... 34 0.25
AY274376-1|AAP31299.1| 363|Drosophila melanogaster Hsc-70-inter... 34 0.25
AY274375-1|AAP31298.1| 363|Drosophila melanogaster Hsc-70-inter... 34 0.25
AY274374-1|AAP31297.1| 363|Drosophila melanogaster Hsc-70-inter... 34 0.25
AY274373-1|AAP31296.1| 363|Drosophila melanogaster Hsc-70-inter... 34 0.25
AY274372-1|AAP31295.1| 363|Drosophila melanogaster Hsc-70-inter... 34 0.25
AY274371-1|AAP31294.1| 363|Drosophila melanogaster Hsc-70-inter... 34 0.25
AY274370-1|AAP31293.1| 363|Drosophila melanogaster Hsc-70-inter... 34 0.25
AY274369-1|AAP31292.1| 363|Drosophila melanogaster Hsc-70-inter... 34 0.25
AY051998-1|AAK93422.1| 377|Drosophila melanogaster LD46530p pro... 34 0.25
AE014298-560|AAN09108.2| 377|Drosophila melanogaster CG32789-PA... 34 0.25
AE014298-557|AAX52473.1| 281|Drosophila melanogaster CG2947-PC,... 34 0.25
AE014298-556|AAF45894.2| 377|Drosophila melanogaster CG2947-PB,... 34 0.25
AE014298-555|AAN09105.1| 377|Drosophila melanogaster CG2947-PA,... 34 0.25
AY060718-1|AAL28266.1| 561|Drosophila melanogaster GH16191p pro... 32 0.78
AE014297-3361|AAF56165.2| 561|Drosophila melanogaster CG31148-P... 32 0.78
AY071365-1|AAL48987.1| 155|Drosophila melanogaster RE39877p pro... 30 3.1
AE014297-1282|AAN13499.1| 155|Drosophila melanogaster CG31386-P... 30 3.1
AE014134-2806|AAF53586.1| 2042|Drosophila melanogaster CG15133-P... 29 7.2
>AY274380-1|AAP31303.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 304 AAIQDILSNPGNITKYASNPKIYNLI 329
>AY274379-1|AAP31302.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 304 AAIQDILSNPGNITKYASNPKIYNLI 329
>AY274378-1|AAP31301.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 304 AAIQDILSNPGNITKYASNPKIYNLI 329
>AY274377-1|AAP31300.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 304 AAIQDILSNPGNITKYASNPKIYNLI 329
>AY274376-1|AAP31299.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 304 AAIQDILSNPGNITKYASNPKIYNLI 329
>AY274375-1|AAP31298.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 304 AAIQDILSNPGNITKYASNPKIYNLI 329
>AY274374-1|AAP31297.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 304 AAIQDILSNPGNITKYASNPKIYNLI 329
>AY274373-1|AAP31296.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 304 AAIQDILSNPGNITKYASNPKIYNLI 329
>AY274372-1|AAP31295.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 304 AAIQDILSNPGNITKYASNPKIYNLI 329
>AY274371-1|AAP31294.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 304 AAIQDILSNPGNITKYASNPKIYNLI 329
>AY274370-1|AAP31293.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 304 AAIQDILSNPGNITKYASNPKIYNLI 329
>AY274369-1|AAP31292.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 304 AAIQDILSNPGNITKYASNPKIYNLI 329
>AY051998-1|AAK93422.1| 377|Drosophila melanogaster LD46530p
protein.
Length = 377
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 311 AAIQDILSNPGNITKYASNPKIYNLI 336
>AE014298-560|AAN09108.2| 377|Drosophila melanogaster CG32789-PA
protein.
Length = 377
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 311 AAIQDILSNPGNITKYASNPKIYNLI 336
>AE014298-557|AAX52473.1| 281|Drosophila melanogaster CG2947-PC,
isoform C protein.
Length = 281
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 215 AAIQDILSNPGNITKYASNPKIYNLI 240
>AE014298-556|AAF45894.2| 377|Drosophila melanogaster CG2947-PB,
isoform B protein.
Length = 377
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 311 AAIQDILSNPGNITKYASNPKIYNLI 336
>AE014298-555|AAN09105.1| 377|Drosophila melanogaster CG2947-PA,
isoform A protein.
Length = 377
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 788 AAFKDVTSNPANFIKYQNNPKIAAVI 711
AA +D+ SNP N KY +NPKI +I
Sbjct: 311 AAIQDILSNPGNITKYASNPKIYNLI 336
>AY060718-1|AAL28266.1| 561|Drosophila melanogaster GH16191p
protein.
Length = 561
Score = 32.3 bits (70), Expect = 0.78
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2
Query: 497 SLNWYSTNIRSNIFYKQNLEC*LVKDYEILIKSDVIIGGRPWSSA 631
SL+WY I N F +Q E D +ILI S+ IG +PW +A
Sbjct: 375 SLHWYWDEIFGNSFIEQTKE--YAPD-KILIVSESCIGDKPWQAA 416
>AE014297-3361|AAF56165.2| 561|Drosophila melanogaster CG31148-PA
protein.
Length = 561
Score = 32.3 bits (70), Expect = 0.78
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2
Query: 497 SLNWYSTNIRSNIFYKQNLEC*LVKDYEILIKSDVIIGGRPWSSA 631
SL+WY I N F +Q E D +ILI S+ IG +PW +A
Sbjct: 375 SLHWYWDEIFGNSFIEQTKE--YAPD-KILIVSESCIGDKPWQAA 416
>AY071365-1|AAL48987.1| 155|Drosophila melanogaster RE39877p
protein.
Length = 155
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -1
Query: 195 SFHLLTDDYYHLLPFCPHNYGE*KLILCC*FFINSRLLKISTASLRT*VCSPSTCVXI 22
S H+L+ + LLP P + + + +R L LR VCS S CV +
Sbjct: 11 SLHILSGADFFLLPLLPSFLSSGSYLRLTFYHVMARYLSARVRVLRVGVCSVSMCVCV 68
>AE014297-1282|AAN13499.1| 155|Drosophila melanogaster CG31386-PA
protein.
Length = 155
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -1
Query: 195 SFHLLTDDYYHLLPFCPHNYGE*KLILCC*FFINSRLLKISTASLRT*VCSPSTCVXI 22
S H+L+ + LLP P + + + +R L LR VCS S CV +
Sbjct: 11 SLHILSGADFFLLPLLPSFLSSGSYLRLTFYHVMARYLSARVRVLRVGVCSVSMCVCV 68
>AE014134-2806|AAF53586.1| 2042|Drosophila melanogaster CG15133-PA
protein.
Length = 2042
Score = 29.1 bits (62), Expect = 7.2
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 693 FACKFSYNSSNFRIVLIFNEICWITCN 773
+ C FS F I+++ NE WI C+
Sbjct: 817 YTCNFSIRLHEFEILMLCNEYNWIDCS 843
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,317,822
Number of Sequences: 53049
Number of extensions: 432549
Number of successful extensions: 755
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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