Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16g22
(113 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 3.2
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 19 4.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 19 5.6
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 19 7.4
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 19 7.4
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 19 7.4
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 19 7.4
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 18 9.7
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 18 9.7
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 18 9.7
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 18 9.7
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 18 9.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 18 9.7
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 18 9.7
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 18 9.7
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 18 9.7
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 18 9.7
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 18 9.7
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 18 9.7
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 18 9.7
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 18 9.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 18 9.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 18 9.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 18 9.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 18 9.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 18 9.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 18 9.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 18 9.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 18 9.7
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.8 bits (39), Expect = 3.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 59 VNDLKTQIISIVP 21
+ND+KTQI + P
Sbjct: 876 INDVKTQITTNTP 888
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 19.4 bits (38), Expect = 4.2
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -1
Query: 68 VSEVNDLKTQIISIVPRNIVN 6
+S+V Q + ++P N+VN
Sbjct: 686 ISQVGGGIQQNVEVLPENLVN 706
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 19.0 bits (37), Expect = 5.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 107 SKLSNADVANLQSVSEVNDLKTQI 36
SKL + V +L EVN + ++
Sbjct: 301 SKLYSVSVVSLDKSLEVNHISARV 324
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 18.6 bits (36), Expect = 7.4
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = +3
Query: 3 SIYNISWYN 29
++ NI+WYN
Sbjct: 51 ALANITWYN 59
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 18.6 bits (36), Expect = 7.4
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = +3
Query: 3 SIYNISWYN 29
++ NI+WYN
Sbjct: 51 ALANITWYN 59
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 18.6 bits (36), Expect = 7.4
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 9 YNISWYNRNYLSF*IIY 59
YN YN NY S + Y
Sbjct: 309 YNYKNYNNNYNSKKLYY 325
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.6 bits (36), Expect = 7.4
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 9 YNISWYNRNYLSF*IIY 59
YN YN NY S + Y
Sbjct: 320 YNYKNYNNNYNSKKLYY 336
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 9 YNISWYNRNYL 41
YN +YN NY+
Sbjct: 106 YNKLYYNINYI 116
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 9 YNISWYNRNY 38
YN + YN NY
Sbjct: 89 YNYNNYNNNY 98
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 9 YNISWYNRNY 38
YN + YN NY
Sbjct: 89 YNYNNYNNNY 98
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 9 YNISWYNRNY 38
YN + YN NY
Sbjct: 89 YNYNNYNNNY 98
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 9 YNISWYNRNY 38
YN + YN NY
Sbjct: 89 YNYNNYNNNY 98
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 9 YNISWYNRNYL 41
YN +YN NY+
Sbjct: 106 YNKLYYNINYI 116
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 9 YNISWYNRNYL 41
YN +YN NY+
Sbjct: 106 YNKLYYNINYI 116
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 9 YNISWYNRNYL 41
YN +YN NY+
Sbjct: 106 YNKLYYNINYI 116
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 9 YNISWYNRNYL 41
YN +YN NY+
Sbjct: 106 YNKLYYNINYI 116
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 9 YNISWYNRNYL 41
YN +YN NY+
Sbjct: 106 YNKLYYNINYI 116
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 9 YNISWYNRNYL 41
YN +YN NY+
Sbjct: 106 YNKLYYNINYI 116
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 9 YNISWYNRNYL 41
YN +YN NY+
Sbjct: 106 YNKLYYNINYI 116
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 9 YNISWYNRNYL 41
YN +YN NY+
Sbjct: 106 YNKLYYNINYI 116
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 18.2 bits (35), Expect = 9.7
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 35 LFEFLNHLLRKLIANW 82
LF FLN ++ + A W
Sbjct: 150 LFSFLNTIVYCVPAGW 165
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 9 YNISWYNRNY 38
YN + YN NY
Sbjct: 322 YNYNNYNNNY 331
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 9 YNISWYNRNY 38
YN + YN NY
Sbjct: 322 YNYNNYNNNY 331
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 9 YNISWYNRNY 38
YN + YN NY
Sbjct: 322 YNYNNYNNNY 331
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 9 YNISWYNRNY 38
YN + YN NY
Sbjct: 322 YNYNNYNNNY 331
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 9 YNISWYNRNY 38
YN + YN NY
Sbjct: 322 YNYNNYNNNY 331
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 9 YNISWYNRNY 38
YN + YN NY
Sbjct: 311 YNYNNYNNNY 320
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 9 YNISWYNRNYL 41
YN +YN NY+
Sbjct: 339 YNKLYYNINYI 349
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 9 YNISWYNRNYL 41
YN +YN NY+
Sbjct: 339 YNKLYYNINYI 349
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,023
Number of Sequences: 438
Number of extensions: 493
Number of successful extensions: 29
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 18
effective length of database: 138,459
effective search space used: 2630721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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