Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16g19
(784 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97630-5|CAI21418.1| 564|Homo sapiens protein ( Human DNA seque... 285 1e-76
CR456436-1|CAG30322.1| 607|Homo sapiens dJ1014D13.1 protein. 285 1e-76
BC029265-1|AAH29265.1| 564|Homo sapiens eukaryotic translation ... 285 1e-76
BC007510-1|AAH07510.1| 564|Homo sapiens eukaryotic translation ... 285 1e-76
BC001101-1|AAH01101.1| 564|Homo sapiens eukaryotic translation ... 285 1e-76
AL022311-2|CAI18865.1| 564|Homo sapiens protein ( Human DNA seq... 285 1e-76
AK222496-1|BAD96216.1| 564|Homo sapiens eukaryotic translation ... 285 2e-76
AF109359-1|AAQ13507.1| 564|Homo sapiens MSTP005 protein. 284 2e-76
AK222529-1|BAD96249.1| 564|Homo sapiens eukaryotic translation ... 283 7e-76
AK098457-1|BAC05310.1| 297|Homo sapiens protein ( Homo sapiens ... 280 5e-75
BC011448-1|AAH11448.2| 188|Homo sapiens EIF3S6IP protein protein. 206 7e-53
>Z97630-5|CAI21418.1| 564|Homo sapiens protein ( Human DNA sequence
from clone RP3-466N1 on chromosome 22q12-13. ).
Length = 564
Score = 285 bits (699), Expect = 1e-76
Identities = 146/254 (57%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Frame = -3
Query: 782 TSYYVGFAYMMMRRYADAIRTLSXALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAIC 603
T YYVGFAY+MMRRY DAIR + LLY+QRTK +F +Y+ + INKQ EQM+ LLAI
Sbjct: 315 TYYYVGFAYLMMRRYQDAIRVFANILLYIQRTKSMFQRTTYKYEMINKQNEQMHALLAIA 374
Query: 602 LVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPIEP-GA 426
L ++P +DESI LREK Y +KM +MQ GD +E F+++CPKFLS P +
Sbjct: 375 LTMYPMRIDESIHLQLREK-YGDKMLRMQKGDPQVYEELFSYSCPKFLSPVVPNYDNVHP 433
Query: 425 NYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREH 246
NY ++ Q +VF DEV+QQ L TIRS+LKLYTT+P+AKLA F+ R
Sbjct: 434 NYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFR------ 487
Query: 245 AALAIHLLCFKHKMKNVVWTKGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFF 66
I LL FKHKMKN+VWT G S LDG+FQS SE+DFYID DMIHIADTKVA RYGDFF
Sbjct: 488 ----IQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFF 543
Query: 65 IRKLLKFEELNRKL 24
IR++ KFEELNR L
Sbjct: 544 IRQIHKFEELNRTL 557
>CR456436-1|CAG30322.1| 607|Homo sapiens dJ1014D13.1 protein.
Length = 607
Score = 285 bits (699), Expect = 1e-76
Identities = 146/254 (57%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Frame = -3
Query: 782 TSYYVGFAYMMMRRYADAIRTLSXALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAIC 603
T YYVGFAY+MMRRY DAIR + LLY+QRTK +F +Y+ + INKQ EQM+ LLAI
Sbjct: 358 TYYYVGFAYLMMRRYQDAIRVFANILLYIQRTKSMFQRTTYKYEMINKQNEQMHALLAIA 417
Query: 602 LVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPIEP-GA 426
L ++P +DESI LREK Y +KM +MQ GD +E F+++CPKFLS P +
Sbjct: 418 LTMYPMRIDESIHLQLREK-YGDKMLRMQKGDPQVYEELFSYSCPKFLSPVVPNYDNVHP 476
Query: 425 NYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREH 246
NY ++ Q +VF DEV+QQ L TIRS+LKLYTT+P+AKLA F+ R
Sbjct: 477 NYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFR------ 530
Query: 245 AALAIHLLCFKHKMKNVVWTKGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFF 66
I LL FKHKMKN+VWT G S LDG+FQS SE+DFYID DMIHIADTKVA RYGDFF
Sbjct: 531 ----IQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFF 586
Query: 65 IRKLLKFEELNRKL 24
IR++ KFEELNR L
Sbjct: 587 IRQIHKFEELNRTL 600
>BC029265-1|AAH29265.1| 564|Homo sapiens eukaryotic translation
initiation factor 3, subunit E interacting protein
protein.
Length = 564
Score = 285 bits (699), Expect = 1e-76
Identities = 146/254 (57%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Frame = -3
Query: 782 TSYYVGFAYMMMRRYADAIRTLSXALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAIC 603
T YYVGFAY+MMRRY DAIR + LLY+QRTK +F +Y+ + INKQ EQM+ LLAI
Sbjct: 315 TYYYVGFAYLMMRRYQDAIRVFANILLYIQRTKSMFQRTTYKYEMINKQNEQMHALLAIA 374
Query: 602 LVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPIEP-GA 426
L ++P +DESI LREK Y +KM +MQ GD +E F+++CPKFLS P +
Sbjct: 375 LTMYPMRIDESIHLQLREK-YGDKMLRMQKGDPQVYEELFSYSCPKFLSPVVPNYDNVHP 433
Query: 425 NYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREH 246
NY ++ Q +VF DEV+QQ L TIRS+LKLYTT+P+AKLA F+ R
Sbjct: 434 NYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFR------ 487
Query: 245 AALAIHLLCFKHKMKNVVWTKGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFF 66
I LL FKHKMKN+VWT G S LDG+FQS SE+DFYID DMIHIADTKVA RYGDFF
Sbjct: 488 ----IQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFF 543
Query: 65 IRKLLKFEELNRKL 24
IR++ KFEELNR L
Sbjct: 544 IRQIHKFEELNRTL 557
>BC007510-1|AAH07510.1| 564|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 interacting protein
protein.
Length = 564
Score = 285 bits (699), Expect = 1e-76
Identities = 146/254 (57%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Frame = -3
Query: 782 TSYYVGFAYMMMRRYADAIRTLSXALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAIC 603
T YYVGFAY+MMRRY DAIR + LLY+QRTK +F +Y+ + INKQ EQM+ LLAI
Sbjct: 315 TYYYVGFAYLMMRRYQDAIRVFANILLYIQRTKSMFQRTTYKYEMINKQNEQMHALLAIA 374
Query: 602 LVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPIEP-GA 426
L ++P +DESI LREK Y +KM +MQ GD +E F+++CPKFLS P +
Sbjct: 375 LTMYPMRIDESIHLQLREK-YGDKMLRMQKGDPQVYEELFSYSCPKFLSPVVPNYDNVHP 433
Query: 425 NYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREH 246
NY ++ Q +VF DEV+QQ L TIRS+LKLYTT+P+AKLA F+ R
Sbjct: 434 NYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFR------ 487
Query: 245 AALAIHLLCFKHKMKNVVWTKGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFF 66
I LL FKHKMKN+VWT G S LDG+FQS SE+DFYID DMIHIADTKVA RYGDFF
Sbjct: 488 ----IQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFF 543
Query: 65 IRKLLKFEELNRKL 24
IR++ KFEELNR L
Sbjct: 544 IRQIHKFEELNRTL 557
>BC001101-1|AAH01101.1| 564|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 interacting protein
protein.
Length = 564
Score = 285 bits (699), Expect = 1e-76
Identities = 146/254 (57%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Frame = -3
Query: 782 TSYYVGFAYMMMRRYADAIRTLSXALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAIC 603
T YYVGFAY+MMRRY DAIR + LLY+QRTK +F +Y+ + INKQ EQM+ LLAI
Sbjct: 315 TYYYVGFAYLMMRRYQDAIRVFANILLYIQRTKSMFQRTTYKYEMINKQNEQMHALLAIA 374
Query: 602 LVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPIEP-GA 426
L ++P +DESI LREK Y +KM +MQ GD +E F+++CPKFLS P +
Sbjct: 375 LTMYPMRIDESIHLQLREK-YGDKMLRMQKGDPQVYEELFSYSCPKFLSPVVPNYDNVHP 433
Query: 425 NYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREH 246
NY ++ Q +VF DEV+QQ L TIRS+LKLYTT+P+AKLA F+ R
Sbjct: 434 NYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFR------ 487
Query: 245 AALAIHLLCFKHKMKNVVWTKGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFF 66
I LL FKHKMKN+VWT G S LDG+FQS SE+DFYID DMIHIADTKVA RYGDFF
Sbjct: 488 ----IQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFF 543
Query: 65 IRKLLKFEELNRKL 24
IR++ KFEELNR L
Sbjct: 544 IRQIHKFEELNRTL 557
>AL022311-2|CAI18865.1| 564|Homo sapiens protein ( Human DNA sequence
from clone RP5-1014D13 on chromosome 22q13.1-13.2. ).
Length = 564
Score = 285 bits (699), Expect = 1e-76
Identities = 146/254 (57%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Frame = -3
Query: 782 TSYYVGFAYMMMRRYADAIRTLSXALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAIC 603
T YYVGFAY+MMRRY DAIR + LLY+QRTK +F +Y+ + INKQ EQM+ LLAI
Sbjct: 315 TYYYVGFAYLMMRRYQDAIRVFANILLYIQRTKSMFQRTTYKYEMINKQNEQMHALLAIA 374
Query: 602 LVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPIEP-GA 426
L ++P +DESI LREK Y +KM +MQ GD +E F+++CPKFLS P +
Sbjct: 375 LTMYPMRIDESIHLQLREK-YGDKMLRMQKGDPQVYEELFSYSCPKFLSPVVPNYDNVHP 433
Query: 425 NYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREH 246
NY ++ Q +VF DEV+QQ L TIRS+LKLYTT+P+AKLA F+ R
Sbjct: 434 NYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFR------ 487
Query: 245 AALAIHLLCFKHKMKNVVWTKGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFF 66
I LL FKHKMKN+VWT G S LDG+FQS SE+DFYID DMIHIADTKVA RYGDFF
Sbjct: 488 ----IQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFF 543
Query: 65 IRKLLKFEELNRKL 24
IR++ KFEELNR L
Sbjct: 544 IRQIHKFEELNRTL 557
>AK222496-1|BAD96216.1| 564|Homo sapiens eukaryotic translation
initiation factor 3 subunit 6 interacting protein varian
protein.
Length = 564
Score = 285 bits (698), Expect = 2e-76
Identities = 146/254 (57%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Frame = -3
Query: 782 TSYYVGFAYMMMRRYADAIRTLSXALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAIC 603
T YYVGFAY+MMRRY DAIR + LLY+QRTK +F +Y+ + INKQ EQM+ LLAI
Sbjct: 315 TYYYVGFAYLMMRRYQDAIRVFANILLYIQRTKSMFQRTTYKYEMINKQNEQMHALLAIA 374
Query: 602 LVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPIEPG-A 426
L ++P +DESI LREK Y +KM +MQ GD +E F+++CPKFLS P +
Sbjct: 375 LTMYPMRIDESIHLQLREK-YGDKMLRMQKGDPQVYEELFSYSCPKFLSPVVPNYDNVYP 433
Query: 425 NYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREH 246
NY ++ Q +VF DEV+QQ L TIRS+LKLYTT+P+AKLA F+ R
Sbjct: 434 NYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFR------ 487
Query: 245 AALAIHLLCFKHKMKNVVWTKGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFF 66
I LL FKHKMKN+VWT G S LDG+FQS SE+DFYID DMIHIADTKVA RYGDFF
Sbjct: 488 ----IQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFF 543
Query: 65 IRKLLKFEELNRKL 24
IR++ KFEELNR L
Sbjct: 544 IRQIHKFEELNRTL 557
>AF109359-1|AAQ13507.1| 564|Homo sapiens MSTP005 protein.
Length = 564
Score = 284 bits (697), Expect = 2e-76
Identities = 146/254 (57%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Frame = -3
Query: 782 TSYYVGFAYMMMRRYADAIRTLSXALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAIC 603
T YYVGFAY+MMRRY DAIR + LLY+QRTK +F +Y+ + INKQ EQM+ LLAI
Sbjct: 315 TYYYVGFAYLMMRRYQDAIRVFANILLYIQRTKSMFQRITYKYEMINKQNEQMHALLAIA 374
Query: 602 LVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPIEP-GA 426
L ++P +DESI LREK Y +KM +MQ GD +E F+++CPKFLS P +
Sbjct: 375 LTMYPMRIDESIHLQLREK-YGDKMLRMQKGDPQVYEELFSYSCPKFLSPVVPNYDNVHP 433
Query: 425 NYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREH 246
NY ++ Q +VF DEV+QQ L TIRS+LKLYTT+P+AKLA F+ R
Sbjct: 434 NYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFR------ 487
Query: 245 AALAIHLLCFKHKMKNVVWTKGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFF 66
I LL FKHKMKN+VWT G S LDG+FQS SE+DFYID DMIHIADTKVA RYGDFF
Sbjct: 488 ----IQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFF 543
Query: 65 IRKLLKFEELNRKL 24
IR++ KFEELNR L
Sbjct: 544 IRQIHKFEELNRTL 557
>AK222529-1|BAD96249.1| 564|Homo sapiens eukaryotic translation
initiation factor 3 subunit 6 interacting protein varian
protein.
Length = 564
Score = 283 bits (693), Expect = 7e-76
Identities = 145/254 (57%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
Frame = -3
Query: 782 TSYYVGFAYMMMRRYADAIRTLSXALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAIC 603
T YYVGFAY+MMRRY DAIR + LLY+QRTK +F +Y+ + INKQ EQM+ LLAI
Sbjct: 315 TYYYVGFAYLMMRRYQDAIRVFANILLYIQRTKSMFQRTTYKYEMINKQNEQMHALLAIA 374
Query: 602 LVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPIEP-GA 426
L ++P +DESI LREK Y +KM +MQ GD +E F+++CPKFLS P +
Sbjct: 375 LTVYPMRIDESIHLQLREK-YGDKMLRMQKGDPQVYEELFSYSCPKFLSPVVPNYDNVHP 433
Query: 425 NYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREH 246
+Y ++ Q +VF DEV+QQ L TIRS+LKLYTT+P+AKLA F+ R
Sbjct: 434 DYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFR------ 487
Query: 245 AALAIHLLCFKHKMKNVVWTKGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFF 66
I LL FKHKMKN+VWT G S LDG+FQS SE+DFYID DMIHIADTKVA RYGDFF
Sbjct: 488 ----IQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFF 543
Query: 65 IRKLLKFEELNRKL 24
IR++ KFEELNR L
Sbjct: 544 IRQIHKFEELNRTL 557
>AK098457-1|BAC05310.1| 297|Homo sapiens protein ( Homo sapiens
cDNA FLJ25591 fis, clone JTH12226. ).
Length = 297
Score = 280 bits (686), Expect = 5e-75
Identities = 143/254 (56%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
Frame = -3
Query: 782 TSYYVGFAYMMMRRYADAIRTLSXALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAIC 603
T YYVGFAY+MMRRY DAIR + LLY+QRTK +F +Y+ + INKQ EQM+ LLAI
Sbjct: 48 TYYYVGFAYLMMRRYQDAIRVFANILLYIQRTKSMFQRTTYKYEMINKQNEQMHALLAIA 107
Query: 602 LVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPIEP-GA 426
L ++P +DE I LREK Y +KM +MQ GD +E F+++CPKFLS P +
Sbjct: 108 LTMYPMRIDEGIHLQLREK-YGDKMLRMQKGDPQVYEELFSYSCPKFLSPVVPNYDNVHP 166
Query: 425 NYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREH 246
NY ++ Q +VF DEV+QQ L TIRS+LKLYTT+P+AKLA F+ R
Sbjct: 167 NYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFR------ 220
Query: 245 AALAIHLLCFKHKMKNVVWTKGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFF 66
I LL FKHKMKN+VWT G S LDG+FQS SE+DFYI+ DMIHIADTK A RYGDFF
Sbjct: 221 ----IQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYINKDMIHIADTKAARRYGDFF 276
Query: 65 IRKLLKFEELNRKL 24
IR++ KFEELNR L
Sbjct: 277 IRQIHKFEELNRTL 290
>BC011448-1|AAH11448.2| 188|Homo sapiens EIF3S6IP protein protein.
Length = 188
Score = 206 bits (503), Expect = 7e-53
Identities = 108/192 (56%), Positives = 131/192 (68%), Gaps = 1/192 (0%)
Frame = -3
Query: 596 LHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPIEP-GANY 420
++P +DESI LREK Y +KM +MQ GD +E F+++CPKFLS P + NY
Sbjct: 1 MYPMRIDESIHLQLREK-YGDKMLRMQKGDPQVYEELFSYSCPKFLSPVVPNYDNVHPNY 59
Query: 419 GRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREHAA 240
++ Q +VF DEV+QQ L TIRS+LKLYTT+P+AKLA F+ R
Sbjct: 60 HKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFR-------- 111
Query: 239 LAIHLLCFKHKMKNVVWTKGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFFIR 60
I LL FKHKMKN+VWT G S LDG+FQS SE+DFYID DMIHIADTKVA RYGDFFIR
Sbjct: 112 --IQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFFIR 169
Query: 59 KLLKFEELNRKL 24
++ KFEELNR L
Sbjct: 170 QIHKFEELNRTL 181
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,866,135
Number of Sequences: 237096
Number of extensions: 2968292
Number of successful extensions: 6234
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6201
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -