Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16g14
(645 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 355 1e-97
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 355 1e-97
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 355 1e-97
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 355 1e-97
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 355 1e-97
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 355 1e-97
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 355 1e-97
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 355 1e-97
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 355 1e-97
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 354 2e-97
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 354 2e-97
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 353 2e-97
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 353 3e-97
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 353 4e-97
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 217 3e-56
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 211 1e-54
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 204 2e-52
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 165 2e-40
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 134 3e-31
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (872), Expect = 1e-97
Identities = 174/203 (85%), Positives = 185/203 (91%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRAC 269
GEKGRRIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 268 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQ 89
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 88 GVXGIKVKIMLPWDQQGKNGPEE 20
GV GIKVKIMLPWD GK GP++
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKK 202
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (872), Expect = 1e-97
Identities = 174/203 (85%), Positives = 185/203 (91%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRAC 269
GEKGRRIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 268 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQ 89
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 88 GVXGIKVKIMLPWDQQGKNGPEE 20
GV GIKVKIMLPWD GK GP++
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKK 202
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (872), Expect = 1e-97
Identities = 174/203 (85%), Positives = 185/203 (91%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRAC 269
GEKGRRIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 268 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQ 89
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 88 GVXGIKVKIMLPWDQQGKNGPEE 20
GV GIKVKIMLPWD GK GP++
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKK 202
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (872), Expect = 1e-97
Identities = 174/203 (85%), Positives = 185/203 (91%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRAC 269
GEKGRRIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 268 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQ 89
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 88 GVXGIKVKIMLPWDQQGKNGPEE 20
GV GIKVKIMLPWD GK GP++
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKK 202
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (872), Expect = 1e-97
Identities = 174/203 (85%), Positives = 185/203 (91%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRAC 269
GEKGRRIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 268 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQ 89
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 88 GVXGIKVKIMLPWDQQGKNGPEE 20
GV GIKVKIMLPWD GK GP++
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKK 202
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (872), Expect = 1e-97
Identities = 174/203 (85%), Positives = 185/203 (91%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRAC 269
GEKGRRIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 268 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQ 89
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 88 GVXGIKVKIMLPWDQQGKNGPEE 20
GV GIKVKIMLPWD GK GP++
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKK 202
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (872), Expect = 1e-97
Identities = 174/203 (85%), Positives = 185/203 (91%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRAC 269
GEKGRRIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 268 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQ 89
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 88 GVXGIKVKIMLPWDQQGKNGPEE 20
GV GIKVKIMLPWD GK GP++
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKK 202
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (872), Expect = 1e-97
Identities = 174/203 (85%), Positives = 185/203 (91%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRAC 269
GEKGRRIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 268 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQ 89
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 88 GVXGIKVKIMLPWDQQGKNGPEE 20
GV GIKVKIMLPWD GK GP++
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKK 202
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (872), Expect = 1e-97
Identities = 174/203 (85%), Positives = 185/203 (91%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRAC 269
GEKGRRIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 268 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQ 89
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 88 GVXGIKVKIMLPWDQQGKNGPEE 20
GV GIKVKIMLPWD GK GP++
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKK 202
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 354 bits (870), Expect = 2e-97
Identities = 171/198 (86%), Positives = 182/198 (91%)
Frame = -3
Query: 613 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 434
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 433 RIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRACYGVLR 254
RIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 253 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQGVXGI 74
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQGV GI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 73 KVKIMLPWDQQGKNGPEE 20
KVKIMLPWD GK GP++
Sbjct: 184 KVKIMLPWDPTGKIGPKK 201
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 354 bits (870), Expect = 2e-97
Identities = 171/198 (86%), Positives = 182/198 (91%)
Frame = -3
Query: 613 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 434
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 433 RIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRACYGVLR 254
RIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 253 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQGVXGI 74
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQGV GI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 73 KVKIMLPWDQQGKNGPEE 20
KVKIMLPWD GK GP++
Sbjct: 184 KVKIMLPWDPTGKIGPKK 201
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 353 bits (869), Expect = 2e-97
Identities = 173/203 (85%), Positives = 185/203 (91%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRAC 269
GEKGRRIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 268 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQ 89
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 88 GVXGIKVKIMLPWDQQGKNGPEE 20
GV GIKVKIMLPWD GK GP++
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKK 202
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 353 bits (868), Expect = 3e-97
Identities = 173/203 (85%), Positives = 185/203 (91%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRAC 269
GEKGRRIRELT+VVQKRF PE SVELYAE+V TRGLCAIAQAES RYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 268 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQ 89
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 88 GVXGIKVKIMLPWDQQGKNGPEE 20
GV GIKVKIMLPWD GK GP++
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKK 202
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 353 bits (867), Expect = 4e-97
Identities = 173/203 (85%), Positives = 184/203 (90%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRAC 269
GEKGRRIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAE RYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRAC 119
Query: 268 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQ 89
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 88 GVXGIKVKIMLPWDQQGKNGPEE 20
GV GIKVKIMLPWD GK GP++
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKK 202
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 217 bits (530), Expect = 3e-56
Identities = 105/127 (82%), Positives = 112/127 (88%)
Frame = -3
Query: 442 KGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRACYG 263
+GRRIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 262 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQGV 83
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 82 XGIKVKI 62
V +
Sbjct: 126 WDTSVHL 132
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 211 bits (516), Expect = 1e-54
Identities = 100/117 (85%), Positives = 106/117 (90%)
Frame = -3
Query: 370 LYAEKVXTRGLCAIAQAESXRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 191
LYAEKV TRGLCAIAQAES RYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 190 RAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQGVXGIKVKIMLPWDQQGKNGPEE 20
RAKSMKFVDGLMIHSGDP N YV+ RHVL+RQGV GIKVKIMLPWD GK GP++
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 117
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 204 bits (499), Expect = 2e-52
Identities = 103/118 (87%), Positives = 109/118 (92%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRGLCAIAQAESXRYKLIGGLAVRR 275
GEKGRRIRELT+VVQKRF PE SVELYAEKV TRGLCAIAQAES RYKL+GGLAVRR
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 165 bits (400), Expect = 2e-40
Identities = 83/96 (86%), Positives = 88/96 (91%)
Frame = -3
Query: 628 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 449
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 448 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVXTRG 341
GEKGRRIRELT+VVQKRF PE SVELYAEKV TRG
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 134 bits (324), Expect = 3e-31
Identities = 62/76 (81%), Positives = 67/76 (88%)
Frame = -3
Query: 247 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNXVTRHVLIRQGVXGIKV 68
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+ RHVL+RQGV GIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 67 KIMLPWDQQGKNGPEE 20
KIMLPWD GK GP++
Sbjct: 61 KIMLPWDPTGKIGPKK 76
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,476,523
Number of Sequences: 237096
Number of extensions: 2062664
Number of successful extensions: 4597
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4597
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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