Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16f20
(704 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127403-1|BAC86961.1| 252|Homo sapiens protein ( Homo sapiens ... 32 1.7
X51602-1|CAA35946.1| 1338|Homo sapiens protein ( Human flt mRNA ... 31 3.0
U01134-1|AAC50060.1| 687|Homo sapiens soluble vascular endothel... 31 3.0
BC039007-1|AAH39007.1| 687|Homo sapiens FLT1 protein protein. 31 3.0
AL139005-1|CAI17096.1| 1338|Homo sapiens fms-related tyrosine ki... 31 3.0
AL138712-1|CAI14846.1| 1338|Homo sapiens fms-related tyrosine ki... 31 3.0
AF063657-1|AAC16449.2| 1338|Homo sapiens vascular endothelial gr... 31 3.0
U87309-1|AAB47563.1| 854|Homo sapiens hVps41p protein. 31 4.0
BC101768-1|AAI01769.1| 1243|Homo sapiens ZFAT zinc finger 1 prot... 31 4.0
BC101766-1|AAI01767.1| 1243|Homo sapiens ZFAT zinc finger 1 prot... 31 4.0
BC098405-1|AAH98405.1| 1204|Homo sapiens ZFAT1 protein protein. 31 4.0
BC044851-1|AAH44851.1| 854|Homo sapiens vacuolar protein sortin... 31 4.0
BC025423-1|AAH25423.1| 1169|Homo sapiens ZFAT1 protein protein. 31 4.0
BC012989-1|AAH12989.1| 1190|Homo sapiens ZFAT1 protein protein. 31 4.0
AF135593-1|AAG43279.1| 779|Homo sapiens hVps41p protein. 31 4.0
AC004850-1|AAQ96883.1| 704|Homo sapiens unknown protein. 31 4.0
AB167741-1|BAD12570.1| 846|Homo sapiens TR-ZFAT protein. 31 4.0
AB167740-1|BAD12569.1| 1231|Homo sapiens ZFAT-3 protein. 31 4.0
AB167739-1|BAD12568.1| 1231|Homo sapiens ZFAT-2 protein. 31 4.0
AB167738-1|BAD12567.1| 1243|Homo sapiens ZFAT-1 protein. 31 4.0
AB040918-1|BAA96009.1| 1104|Homo sapiens KIAA1485 protein protein. 31 4.0
U40215-1|AAC50718.1| 478|Homo sapiens synapsin IIb protein. 31 5.3
BC051307-1|AAH51307.1| 582|Homo sapiens synapsin II protein. 31 5.3
AF077737-1|AAC33789.1| 478|Homo sapiens synapsin IIb protein. 31 5.3
AF077671-1|AAC28368.1| 582|Homo sapiens synapsin IIa protein. 31 5.3
AB209088-1|BAD92325.1| 514|Homo sapiens synapsin II isoform IIb... 31 5.3
BC022228-1|AAH22228.1| 429|Homo sapiens C2orf30 protein protein. 30 7.0
AY358717-1|AAQ89079.1| 429|Homo sapiens CL25084 protein. 30 7.0
AK124805-1|BAC85954.1| 189|Homo sapiens protein ( Homo sapiens ... 30 9.3
>AK127403-1|BAC86961.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ45494 fis, clone BRTHA2010672, moderately
similar to Homo sapiens neutral protease large subunit.
).
Length = 252
Score = 32.3 bits (70), Expect = 1.7
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +2
Query: 83 CNKSNTSFKSLYTSIHCLPKSLITV*HEKDFSSCVVLPRRY*NKMCMHDNLCLLKCSLPI 262
C +F ++ H LP SLI + H S+ +V+P + H LL S P+
Sbjct: 145 CQLRQHAFMHFFSYPH-LPSSLIRLRHFNKLSASLVIPG-----LQPHLTAVLLPNSRPL 198
Query: 263 PQNRPYISAITRGQLYDSSTC 325
+ P++S Q++D+STC
Sbjct: 199 -SHPPFVSPHLNPQVWDTSTC 218
>X51602-1|CAA35946.1| 1338|Homo sapiens protein ( Human flt mRNA for
receptor-related tyrosine kinase. ).
Length = 1338
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 89 KSNTSFKSLYTSIHCLPKSLITV*HEK 169
+S SFKS+ TS+H K+ ITV H K
Sbjct: 314 RSGPSFKSVNTSVHIYDKAFITVKHRK 340
>U01134-1|AAC50060.1| 687|Homo sapiens soluble vascular endothelial
cell growth factor receptor protein.
Length = 687
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 89 KSNTSFKSLYTSIHCLPKSLITV*HEK 169
+S SFKS+ TS+H K+ ITV H K
Sbjct: 314 RSGPSFKSVNTSVHIYDKAFITVKHRK 340
>BC039007-1|AAH39007.1| 687|Homo sapiens FLT1 protein protein.
Length = 687
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 89 KSNTSFKSLYTSIHCLPKSLITV*HEK 169
+S SFKS+ TS+H K+ ITV H K
Sbjct: 314 RSGPSFKSVNTSVHIYDKAFITVKHRK 340
>AL139005-1|CAI17096.1| 1338|Homo sapiens fms-related tyrosine
kinase 1 (vascular endothelial growth factor/vascular
perm protein.
Length = 1338
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 89 KSNTSFKSLYTSIHCLPKSLITV*HEK 169
+S SFKS+ TS+H K+ ITV H K
Sbjct: 314 RSGPSFKSVNTSVHIYDKAFITVKHRK 340
>AL138712-1|CAI14846.1| 1338|Homo sapiens fms-related tyrosine
kinase 1 (vascular endothelial growth factor/vascular
perm protein.
Length = 1338
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 89 KSNTSFKSLYTSIHCLPKSLITV*HEK 169
+S SFKS+ TS+H K+ ITV H K
Sbjct: 314 RSGPSFKSVNTSVHIYDKAFITVKHRK 340
>AF063657-1|AAC16449.2| 1338|Homo sapiens vascular endothelial
growth factor receptor protein.
Length = 1338
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 89 KSNTSFKSLYTSIHCLPKSLITV*HEK 169
+S SFKS+ TS+H K+ ITV H K
Sbjct: 314 RSGPSFKSVNTSVHIYDKAFITVKHRK 340
>U87309-1|AAB47563.1| 854|Homo sapiens hVps41p protein.
Length = 854
Score = 31.1 bits (67), Expect = 4.0
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -3
Query: 159 YTVIKDFGRQCIDVYRDL--KDVFDLLHAHSMSDKDKNSLMDLLCVMDCEE 13
YT K++G +++Y L KDVF L+H H++ K+ ++ LL D E+
Sbjct: 518 YTYDKNYGN-ALEIYLTLRHKDVFQLIHKHNLFSSIKDKIV-LLMDFDSEK 566
>BC101768-1|AAI01769.1| 1243|Homo sapiens ZFAT zinc finger 1
protein.
Length = 1243
Score = 31.1 bits (67), Expect = 4.0
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = -3
Query: 330 RLHVDES-YNCPRV-IAEMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSFSCY 157
R+H +E Y CP+ A + + K +C + F L K + +
Sbjct: 291 RIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCL-SKGHLKVHIERVH 349
Query: 156 TVIKDFGRQCIDVYRDLKDVFDLLH-AHSMSDKDKNSLMDLLCVMDCE 16
IK R C Y D+K++ + AH DK +D LC+M E
Sbjct: 350 KKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTRE 397
>BC101766-1|AAI01767.1| 1243|Homo sapiens ZFAT zinc finger 1
protein.
Length = 1243
Score = 31.1 bits (67), Expect = 4.0
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = -3
Query: 330 RLHVDES-YNCPRV-IAEMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSFSCY 157
R+H +E Y CP+ A + + K +C + F L K + +
Sbjct: 291 RIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCL-SKGHLKVHIERVH 349
Query: 156 TVIKDFGRQCIDVYRDLKDVFDLLH-AHSMSDKDKNSLMDLLCVMDCE 16
IK R C Y D+K++ + AH DK +D LC+M E
Sbjct: 350 KKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTRE 397
>BC098405-1|AAH98405.1| 1204|Homo sapiens ZFAT1 protein protein.
Length = 1204
Score = 31.1 bits (67), Expect = 4.0
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = -3
Query: 330 RLHVDES-YNCPRV-IAEMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSFSCY 157
R+H +E Y CP+ A + + K +C + F L K + +
Sbjct: 327 RIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCL-SKGHLKVHIERVH 385
Query: 156 TVIKDFGRQCIDVYRDLKDVFDLLH-AHSMSDKDKNSLMDLLCVMDCE 16
IK R C Y D+K++ + AH DK +D LC+M E
Sbjct: 386 KKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTRE 433
>BC044851-1|AAH44851.1| 854|Homo sapiens vacuolar protein sorting
41 homolog (S. cerevisiae) protein.
Length = 854
Score = 31.1 bits (67), Expect = 4.0
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -3
Query: 159 YTVIKDFGRQCIDVYRDL--KDVFDLLHAHSMSDKDKNSLMDLLCVMDCEE 13
YT K++G +++Y L KDVF L+H H++ K+ ++ LL D E+
Sbjct: 518 YTYDKNYGN-ALEIYLTLRHKDVFQLIHKHNLFSSIKDKIV-LLMDFDSEK 566
>BC025423-1|AAH25423.1| 1169|Homo sapiens ZFAT1 protein protein.
Length = 1169
Score = 31.1 bits (67), Expect = 4.0
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = -3
Query: 330 RLHVDES-YNCPRV-IAEMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSFSCY 157
R+H +E Y CP+ A + + K +C + F L K + +
Sbjct: 217 RIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCL-SKGHLKVHIERVH 275
Query: 156 TVIKDFGRQCIDVYRDLKDVFDLLH-AHSMSDKDKNSLMDLLCVMDCE 16
IK R C Y D+K++ + AH DK +D LC+M E
Sbjct: 276 KKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTRE 323
>BC012989-1|AAH12989.1| 1190|Homo sapiens ZFAT1 protein protein.
Length = 1190
Score = 31.1 bits (67), Expect = 4.0
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = -3
Query: 330 RLHVDES-YNCPRV-IAEMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSFSCY 157
R+H +E Y CP+ A + + K +C + F L K + +
Sbjct: 324 RIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCL-SKGHLKVHIERVH 382
Query: 156 TVIKDFGRQCIDVYRDLKDVFDLLH-AHSMSDKDKNSLMDLLCVMDCE 16
IK R C Y D+K++ + AH DK +D LC+M E
Sbjct: 383 KKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTRE 430
>AF135593-1|AAG43279.1| 779|Homo sapiens hVps41p protein.
Length = 779
Score = 31.1 bits (67), Expect = 4.0
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -3
Query: 159 YTVIKDFGRQCIDVYRDL--KDVFDLLHAHSMSDKDKNSLMDLLCVMDCEE 13
YT K++G +++Y L KDVF L+H H++ K+ ++ LL D E+
Sbjct: 443 YTYDKNYGN-ALEIYLTLRHKDVFQLIHKHNLFSSIKDKIV-LLMDFDSEK 491
>AC004850-1|AAQ96883.1| 704|Homo sapiens unknown protein.
Length = 704
Score = 31.1 bits (67), Expect = 4.0
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -3
Query: 159 YTVIKDFGRQCIDVYRDL--KDVFDLLHAHSMSDKDKNSLMDLLCVMDCEE 13
YT K++G +++Y L KDVF L+H H++ K+ ++ LL D E+
Sbjct: 368 YTYDKNYGN-ALEIYLTLRHKDVFQLIHKHNLFSSIKDKIV-LLMDFDSEK 416
>AB167741-1|BAD12570.1| 846|Homo sapiens TR-ZFAT protein.
Length = 846
Score = 31.1 bits (67), Expect = 4.0
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = -3
Query: 330 RLHVDES-YNCPRV-IAEMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSFSCY 157
R+H +E Y CP+ A + + K +C + F L K + +
Sbjct: 279 RIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCL-SKGHLKVHIERVH 337
Query: 156 TVIKDFGRQCIDVYRDLKDVFDLLH-AHSMSDKDKNSLMDLLCVMDCE 16
IK R C Y D+K++ + AH DK +D LC+M E
Sbjct: 338 KKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTRE 385
>AB167740-1|BAD12569.1| 1231|Homo sapiens ZFAT-3 protein.
Length = 1231
Score = 31.1 bits (67), Expect = 4.0
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = -3
Query: 330 RLHVDES-YNCPRV-IAEMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSFSCY 157
R+H +E Y CP+ A + + K +C + F L K + +
Sbjct: 279 RIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCL-SKGHLKVHIERVH 337
Query: 156 TVIKDFGRQCIDVYRDLKDVFDLLH-AHSMSDKDKNSLMDLLCVMDCE 16
IK R C Y D+K++ + AH DK +D LC+M E
Sbjct: 338 KKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTRE 385
>AB167739-1|BAD12568.1| 1231|Homo sapiens ZFAT-2 protein.
Length = 1231
Score = 31.1 bits (67), Expect = 4.0
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = -3
Query: 330 RLHVDES-YNCPRV-IAEMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSFSCY 157
R+H +E Y CP+ A + + K +C + F L K + +
Sbjct: 279 RIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCL-SKGHLKVHIERVH 337
Query: 156 TVIKDFGRQCIDVYRDLKDVFDLLH-AHSMSDKDKNSLMDLLCVMDCE 16
IK R C Y D+K++ + AH DK +D LC+M E
Sbjct: 338 KKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTRE 385
>AB167738-1|BAD12567.1| 1243|Homo sapiens ZFAT-1 protein.
Length = 1243
Score = 31.1 bits (67), Expect = 4.0
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = -3
Query: 330 RLHVDES-YNCPRV-IAEMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSFSCY 157
R+H +E Y CP+ A + + K +C + F L K + +
Sbjct: 291 RIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCL-SKGHLKVHIERVH 349
Query: 156 TVIKDFGRQCIDVYRDLKDVFDLLH-AHSMSDKDKNSLMDLLCVMDCE 16
IK R C Y D+K++ + AH DK +D LC+M E
Sbjct: 350 KKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTRE 397
>AB040918-1|BAA96009.1| 1104|Homo sapiens KIAA1485 protein protein.
Length = 1104
Score = 31.1 bits (67), Expect = 4.0
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = -3
Query: 330 RLHVDES-YNCPRV-IAEMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSFSCY 157
R+H +E Y CP+ A + + K +C + F L K + +
Sbjct: 152 RIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCL-SKGHLKVHIERVH 210
Query: 156 TVIKDFGRQCIDVYRDLKDVFDLLH-AHSMSDKDKNSLMDLLCVMDCE 16
IK R C Y D+K++ + AH DK +D LC+M E
Sbjct: 211 KKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTRE 258
>U40215-1|AAC50718.1| 478|Homo sapiens synapsin IIb protein.
Length = 478
Score = 30.7 bits (66), Expect = 5.3
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 574 VLRNFSFKIVQREYLPSGLNAHADGNHRVDL--LQHFTDVI 690
VL ++ K+ Q E+ L AHADG + VD+ L++ T V+
Sbjct: 135 VLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVV 175
>BC051307-1|AAH51307.1| 582|Homo sapiens synapsin II protein.
Length = 582
Score = 30.7 bits (66), Expect = 5.3
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 574 VLRNFSFKIVQREYLPSGLNAHADGNHRVDL--LQHFTDVI 690
VL ++ K+ Q E+ L AHADG + VD+ L++ T V+
Sbjct: 135 VLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVV 175
>AF077737-1|AAC33789.1| 478|Homo sapiens synapsin IIb protein.
Length = 478
Score = 30.7 bits (66), Expect = 5.3
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 574 VLRNFSFKIVQREYLPSGLNAHADGNHRVDL--LQHFTDVI 690
VL ++ K+ Q E+ L AHADG + VD+ L++ T V+
Sbjct: 135 VLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVV 175
>AF077671-1|AAC28368.1| 582|Homo sapiens synapsin IIa protein.
Length = 582
Score = 30.7 bits (66), Expect = 5.3
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 574 VLRNFSFKIVQREYLPSGLNAHADGNHRVDL--LQHFTDVI 690
VL ++ K+ Q E+ L AHADG + VD+ L++ T V+
Sbjct: 135 VLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVV 175
>AB209088-1|BAD92325.1| 514|Homo sapiens synapsin II isoform IIb
variant protein.
Length = 514
Score = 30.7 bits (66), Expect = 5.3
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 574 VLRNFSFKIVQREYLPSGLNAHADGNHRVDL--LQHFTDVI 690
VL ++ K+ Q E+ L AHADG + VD+ L++ T V+
Sbjct: 171 VLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVV 211
>BC022228-1|AAH22228.1| 429|Homo sapiens C2orf30 protein protein.
Length = 429
Score = 30.3 bits (65), Expect = 7.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 492 FNPNSDAVGWWYNKFCVITYVHR 424
F N + VGWW +FC +VH+
Sbjct: 288 FRRNKEGVGWWKYEFCYGKHVHQ 310
>AY358717-1|AAQ89079.1| 429|Homo sapiens CL25084 protein.
Length = 429
Score = 30.3 bits (65), Expect = 7.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 492 FNPNSDAVGWWYNKFCVITYVHR 424
F N + VGWW +FC +VH+
Sbjct: 288 FRRNKEGVGWWKYEFCYGKHVHQ 310
>AK124805-1|BAC85954.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ42815 fis, clone BRCAN2014143. ).
Length = 189
Score = 29.9 bits (64), Expect = 9.3
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Frame = +3
Query: 57 CLYLTYYVHVTNQIHL---LNLYTHLYIVYQNL**LYNMKKTFLLAW-FCRVDIEIKC-- 218
C+YL Y ++ IH+ L +Y H+Y + + + A+ + R I I C
Sbjct: 24 CIYLHVYTYICMYIHIYPYLCMYVHIYPYICTCIYTHICMRVHVYAYMYVRTYIHIMCMH 83
Query: 219 ACTTICVY-*NALCLYRKTGHTFRQLHADNCTIRLRVNDHHNHFC 350
C +CV+ +C T H F + C + +R H H C
Sbjct: 84 VCVYVCVHACMCVCTCAYT-HVFVCVRVRTC-VYMRT---HTHIC 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,894,909
Number of Sequences: 237096
Number of extensions: 2170471
Number of successful extensions: 8095
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 7925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8091
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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