Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16f20
(704 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023844-1|AAZ86765.1| 582|Drosophila melanogaster IP14442p pro... 30 2.7
BT022748-1|AAY55164.1| 346|Drosophila melanogaster IP14642p pro... 30 2.7
BT022742-1|AAY55158.1| 346|Drosophila melanogaster IP14542p pro... 30 2.7
AE014134-1245|AAF52490.1| 580|Drosophila melanogaster CG4496-PA... 30 2.7
BT029670-1|ABL75727.1| 391|Drosophila melanogaster IP17324p pro... 29 4.7
BT029649-1|ABL75708.1| 391|Drosophila melanogaster IP17224p pro... 29 4.7
BT025919-1|ABG02163.1| 442|Drosophila melanogaster IP10434p pro... 29 4.7
AY118290-1|AAM48319.1| 810|Drosophila melanogaster AT26738p pro... 29 4.7
AF520715-1|AAM55244.1| 4723|Drosophila melanogaster MICAL long i... 29 4.7
AF520714-1|AAM55243.1| 3002|Drosophila melanogaster MICAL medium... 29 4.7
AF520713-1|AAM55242.1| 2734|Drosophila melanogaster MICAL short ... 29 4.7
AE014297-1072|AAF54478.2| 810|Drosophila melanogaster CG33208-P... 29 4.7
AE014297-1071|AAO41537.1| 4723|Drosophila melanogaster CG33208-P... 29 4.7
AE014297-1070|AAO41536.1| 4723|Drosophila melanogaster CG33208-P... 29 4.7
AE014297-1069|AAO41535.1| 4723|Drosophila melanogaster CG33208-P... 29 4.7
AE014297-1068|AAO41534.1| 4723|Drosophila melanogaster CG33208-P... 29 4.7
AE014297-1067|AAO41533.1| 4723|Drosophila melanogaster CG33208-P... 29 4.7
AE014297-1066|AAO41532.1| 3002|Drosophila melanogaster CG33208-P... 29 4.7
AE014297-1065|AAO41531.1| 2734|Drosophila melanogaster CG33208-P... 29 4.7
AE014296-1781|AAF50182.1| 350|Drosophila melanogaster CG12524-P... 29 4.7
AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD... 29 4.7
AE014296-409|ABI31228.1| 3090|Drosophila melanogaster CG33484-PB... 29 4.7
>BT023844-1|AAZ86765.1| 582|Drosophila melanogaster IP14442p
protein.
Length = 582
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 399 ELVPRLSEAVKKFIRLSKSDYDDRLHVDESYNCP 298
EL+PR V I LS SD+D+ VDE + P
Sbjct: 147 ELIPRRVHRVVAEIELSDSDHDEDSEVDEDVSLP 180
>BT022748-1|AAY55164.1| 346|Drosophila melanogaster IP14642p
protein.
Length = 346
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 399 ELVPRLSEAVKKFIRLSKSDYDDRLHVDESYNCP 298
EL+PR V I LS SD+D+ VDE + P
Sbjct: 147 ELIPRRVHRVVAEIELSDSDHDEDSEVDEDVSLP 180
>BT022742-1|AAY55158.1| 346|Drosophila melanogaster IP14542p
protein.
Length = 346
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 399 ELVPRLSEAVKKFIRLSKSDYDDRLHVDESYNCP 298
EL+PR V I LS SD+D+ VDE + P
Sbjct: 147 ELIPRRVHRVVAEIELSDSDHDEDSEVDEDVSLP 180
>AE014134-1245|AAF52490.1| 580|Drosophila melanogaster CG4496-PA
protein.
Length = 580
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 399 ELVPRLSEAVKKFIRLSKSDYDDRLHVDESYNCP 298
EL+PR V I LS SD+D+ VDE + P
Sbjct: 147 ELIPRRVHRVVAEIELSDSDHDEDSEVDEDVSLP 180
>BT029670-1|ABL75727.1| 391|Drosophila melanogaster IP17324p
protein.
Length = 391
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -3
Query: 684 VRKVLEQIDAVVPVSVRVQTGRQIFSLNNFEREISQDMLGCLQIILGRFEHFMRNGKLLH 505
V V + ID + + + +Q+F N + +I Q++L C++ ++ R E ++L
Sbjct: 55 VANVFDSIDELSIRRMVLPKVKQVFEKNITDPKIVQNVLMCIERVMDRMERAQVMDEVLP 114
Query: 504 -IANVFNPNSDAV 469
+AN+ P+ D +
Sbjct: 115 LLANIRIPDPDII 127
>BT029649-1|ABL75708.1| 391|Drosophila melanogaster IP17224p
protein.
Length = 391
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -3
Query: 684 VRKVLEQIDAVVPVSVRVQTGRQIFSLNNFEREISQDMLGCLQIILGRFEHFMRNGKLLH 505
V V + ID + + + +Q+F N + +I Q++L C++ ++ R E ++L
Sbjct: 55 VANVFDSIDELSIRRMVLPKVKQVFEKNITDPKIVQNVLMCIERVMDRMERAQVMDEVLP 114
Query: 504 -IANVFNPNSDAV 469
+AN+ P+ D +
Sbjct: 115 LLANIRIPDPDII 127
>BT025919-1|ABG02163.1| 442|Drosophila melanogaster IP10434p
protein.
Length = 442
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -3
Query: 684 VRKVLEQIDAVVPVSVRVQTGRQIFSLNNFEREISQDMLGCLQIILGRFEHFMRNGKLLH 505
V V + ID + + + +Q+F N + +I Q++L C++ ++ R E ++L
Sbjct: 184 VANVFDSIDELSIRRMVLPKVKQVFEKNITDPKIVQNVLMCIERVMDRMERAQVMDEVLP 243
Query: 504 -IANVFNPNSDAV 469
+AN+ P+ D +
Sbjct: 244 LLANIRIPDPDII 256
>AY118290-1|AAM48319.1| 810|Drosophila melanogaster AT26738p
protein.
Length = 810
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 285 EMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSF 166
+ YG+FC +H S +L CM + L G E SF
Sbjct: 185 KFYGKFCAGSIDHISIRQLQCMLLKVALLLGVEIHEGVSF 224
>AF520715-1|AAM55244.1| 4723|Drosophila melanogaster MICAL long
isoform protein.
Length = 4723
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 285 EMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSF 166
+ YG+FC +H S +L CM + L G E SF
Sbjct: 185 KFYGKFCAGSIDHISIRQLQCMLLKVALLLGVEIHEGVSF 224
>AF520714-1|AAM55243.1| 3002|Drosophila melanogaster MICAL medium
isoform protein.
Length = 3002
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 285 EMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSF 166
+ YG+FC +H S +L CM + L G E SF
Sbjct: 185 KFYGKFCAGSIDHISIRQLQCMLLKVALLLGVEIHEGVSF 224
>AF520713-1|AAM55242.1| 2734|Drosophila melanogaster MICAL short
isoform protein.
Length = 2734
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 285 EMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSF 166
+ YG+FC +H S +L CM + L G E SF
Sbjct: 185 KFYGKFCAGSIDHISIRQLQCMLLKVALLLGVEIHEGVSF 224
>AE014297-1072|AAF54478.2| 810|Drosophila melanogaster CG33208-PA,
isoform A protein.
Length = 810
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 285 EMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSF 166
+ YG+FC +H S +L CM + L G E SF
Sbjct: 185 KFYGKFCAGSIDHISIRQLQCMLLKVALLLGVEIHEGVSF 224
>AE014297-1071|AAO41537.1| 4723|Drosophila melanogaster CG33208-PH,
isoform H protein.
Length = 4723
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 285 EMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSF 166
+ YG+FC +H S +L CM + L G E SF
Sbjct: 185 KFYGKFCAGSIDHISIRQLQCMLLKVALLLGVEIHEGVSF 224
>AE014297-1070|AAO41536.1| 4723|Drosophila melanogaster CG33208-PG,
isoform G protein.
Length = 4723
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 285 EMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSF 166
+ YG+FC +H S +L CM + L G E SF
Sbjct: 185 KFYGKFCAGSIDHISIRQLQCMLLKVALLLGVEIHEGVSF 224
>AE014297-1069|AAO41535.1| 4723|Drosophila melanogaster CG33208-PF,
isoform F protein.
Length = 4723
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 285 EMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSF 166
+ YG+FC +H S +L CM + L G E SF
Sbjct: 185 KFYGKFCAGSIDHISIRQLQCMLLKVALLLGVEIHEGVSF 224
>AE014297-1068|AAO41534.1| 4723|Drosophila melanogaster CG33208-PD,
isoform D protein.
Length = 4723
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 285 EMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSF 166
+ YG+FC +H S +L CM + L G E SF
Sbjct: 185 KFYGKFCAGSIDHISIRQLQCMLLKVALLLGVEIHEGVSF 224
>AE014297-1067|AAO41533.1| 4723|Drosophila melanogaster CG33208-PC,
isoform C protein.
Length = 4723
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 285 EMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSF 166
+ YG+FC +H S +L CM + L G E SF
Sbjct: 185 KFYGKFCAGSIDHISIRQLQCMLLKVALLLGVEIHEGVSF 224
>AE014297-1066|AAO41532.1| 3002|Drosophila melanogaster CG33208-PB,
isoform B protein.
Length = 3002
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 285 EMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSF 166
+ YG+FC +H S +L CM + L G E SF
Sbjct: 185 KFYGKFCAGSIDHISIRQLQCMLLKVALLLGVEIHEGVSF 224
>AE014297-1065|AAO41531.1| 2734|Drosophila melanogaster CG33208-PE,
isoform E protein.
Length = 2734
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 285 EMYGRFCGIGKEHFSKHKLSCMHILFQYLRGKTTQEEKSF 166
+ YG+FC +H S +L CM + L G E SF
Sbjct: 185 KFYGKFCAGSIDHISIRQLQCMLLKVALLLGVEIHEGVSF 224
>AE014296-1781|AAF50182.1| 350|Drosophila melanogaster CG12524-PA
protein.
Length = 350
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -3
Query: 684 VRKVLEQIDAVVPVSVRVQTGRQIFSLNNFEREISQDMLGCLQIILGRFEHFMRNGKLLH 505
V V + ID + + + +Q+F N + +I Q++L C++ ++ R E ++L
Sbjct: 155 VANVFDSIDELSIRRMVLPKVKQVFEKNITDPKIVQNVLMCIERVMDRMERAQVMDEVLP 214
Query: 504 -IANVFNPNSDAV 469
+AN+ P+ D +
Sbjct: 215 LLANIRIPDPDII 227
>AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD,
isoform D protein.
Length = 3651
Score = 29.5 bits (63), Expect = 4.7
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 430 HISYHTKFIVPPSDSVAIRVEHVGDVQQFSVSHEMFKAAQNNLQAAQHVLRNFSFKIVQR 609
H Y K +PP + + I V+H Q +S +E+ + +Q + + + +R
Sbjct: 3441 HSPYPLK--LPPGNELVIPVQHERSAQGYSSDNEVQRRSQTRNWSTTKPMAPRTINSHKR 3498
Query: 610 EYLPSG--LNAHADGNH 654
LPSG L+ H D H
Sbjct: 3499 YSLPSGHSLDIHLDRLH 3515
>AE014296-409|ABI31228.1| 3090|Drosophila melanogaster CG33484-PB,
isoform B protein.
Length = 3090
Score = 29.5 bits (63), Expect = 4.7
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 430 HISYHTKFIVPPSDSVAIRVEHVGDVQQFSVSHEMFKAAQNNLQAAQHVLRNFSFKIVQR 609
H Y K +PP + + I V+H Q +S +E+ + +Q + + + +R
Sbjct: 2880 HSPYPLK--LPPGNELVIPVQHERSAQGYSSDNEVQRRSQTRNWSTTKPMAPRTINSHKR 2937
Query: 610 EYLPSG--LNAHADGNH 654
LPSG L+ H D H
Sbjct: 2938 YSLPSGHSLDIHLDRLH 2954
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,686,816
Number of Sequences: 53049
Number of extensions: 726599
Number of successful extensions: 2222
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2222
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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