Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc16f15
         (744 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S80343-1|AAB35627.1|  659|Homo sapiens arginyl-tRNA synthetase p...    31   5.8  
BT007394-1|AAP36058.1|  660|Homo sapiens arginyl-tRNA synthetase...    31   5.8  
BC014619-1|AAH14619.1|  660|Homo sapiens arginyl-tRNA synthetase...    31   5.8  
BC000528-1|AAH00528.1|  660|Homo sapiens arginyl-tRNA synthetase...    31   5.8  
AK222797-1|BAD96517.1|  660|Homo sapiens arginyl-tRNA synthetase...    31   5.8  

>S80343-1|AAB35627.1|  659|Homo sapiens arginyl-tRNA synthetase
           protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -3

Query: 682 TICDYFYTLPRIFFNEFYDSIIC 614
           T+CDY Y L    F EFYDS  C
Sbjct: 596 TLCDYIYELATA-FTEFYDSCYC 617


>BT007394-1|AAP36058.1|  660|Homo sapiens arginyl-tRNA synthetase
           protein.
          Length = 660

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -3

Query: 682 TICDYFYTLPRIFFNEFYDSIIC 614
           T+CDY Y L    F EFYDS  C
Sbjct: 596 TLCDYIYELATA-FTEFYDSCYC 617


>BC014619-1|AAH14619.1|  660|Homo sapiens arginyl-tRNA synthetase
           protein.
          Length = 660

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -3

Query: 682 TICDYFYTLPRIFFNEFYDSIIC 614
           T+CDY Y L    F EFYDS  C
Sbjct: 596 TLCDYIYELATA-FTEFYDSCYC 617


>BC000528-1|AAH00528.1|  660|Homo sapiens arginyl-tRNA synthetase
           protein.
          Length = 660

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -3

Query: 682 TICDYFYTLPRIFFNEFYDSIIC 614
           T+CDY Y L    F EFYDS  C
Sbjct: 596 TLCDYIYELATA-FTEFYDSCYC 617


>AK222797-1|BAD96517.1|  660|Homo sapiens arginyl-tRNA synthetase
           variant protein.
          Length = 660

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -3

Query: 682 TICDYFYTLPRIFFNEFYDSIIC 614
           T+CDY Y L    F EFYDS  C
Sbjct: 596 TLCDYIYELATA-FTEFYDSCYC 617


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,668,513
Number of Sequences: 237096
Number of extensions: 1917647
Number of successful extensions: 2258
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2258
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)