Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc16f02
         (355 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   1.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   1.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   6.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   8.6  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    20   8.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    20   8.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   8.6  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 148 RTGPFTFLMI*RLVS 192
           RTG FTFLM+  ++S
Sbjct: 76  RTGSFTFLMVVAVLS 90


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 148 RTGPFTFLMI*RLVS 192
           RTG FTFLM+  ++S
Sbjct: 76  RTGSFTFLMVVAVLS 90


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 338 SFGARVLIVLSSILQAKMDKPNV 270
           ++GA +L     +L A  DKP +
Sbjct: 417 AYGAGLLSAYGELLHALSDKPEL 439


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 242 GRVLSRHEQERWVY 283
           G V SRH  E W +
Sbjct: 154 GSVYSRHPYESWPF 167


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 233 NQYGRVLSRHEQERWVYPFWLVISSLIQLTHVH 331
           NQ+ ++L   + +R     ++V + L QL HV+
Sbjct: 84  NQWCKLLENLKLDRENNSSFVVANVLFQLIHVY 116


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 233 NQYGRVLSRHEQERWVYPFWLVISSLIQLTHVH 331
           NQ+ ++L   + +R     ++V + L QL HV+
Sbjct: 84  NQWCKLLENLKLDRENNSSFVVANVLFQLIHVY 116


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 233 NQYGRVLSRHEQERWVYPFWLVISSLIQLTHVH 331
           NQ+ ++L   + +R     ++V + L QL HV+
Sbjct: 404 NQWCKLLENLKLDRENNSSFVVANVLFQLIHVY 436


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,582
Number of Sequences: 336
Number of extensions: 1591
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)