Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16e09
(746 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 24 1.1
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 23 2.6
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 23 2.6
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 23 2.6
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 23 3.4
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 23 3.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.5
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 22 4.5
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 22 4.5
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 21 7.9
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 21 7.9
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 153 YIISNKSTLNSKNPDDE 203
Y++++K T+ SKN DDE
Sbjct: 135 YLVADKVTVVSKNNDDE 151
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 606 AMYFCKPVIAVNNGGPTETVVNEVTGFLC 520
A F P++A+ GP E V + F+C
Sbjct: 198 AALFTSPILAITQYGPEEYVDGSIV-FVC 225
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 239 IQQFTLFIHSHTMSNIVGVFAFCYFFFLS 325
I QF + H MS + + + YFF+LS
Sbjct: 64 IIQFPISAHFSFMSRFLCLPFYSYFFYLS 92
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 239 IQQFTLFIHSHTMSNIVGVFAFCYFFFLS 325
I QF + H MS + + + YFF+LS
Sbjct: 20 IIQFPISAHFSFMSRFLCLPFYSYFFYLS 48
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 protein.
Length = 980
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 528 FLCEPNSKSFATAMSKLVLNPD 463
++CE K S LV NPD
Sbjct: 935 YMCEGERKHHMPCPSNLVFNPD 956
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 530 PVTS--LTTVSVGPPLFTAITGLQKYIASNGTMP 625
P++S +T+ + PP T +G +ASN + P
Sbjct: 21 PISSSGMTSPAAAPPPATTSSGSPASVASNASAP 54
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 76 VHL*TIPLNYKHILSYLVINLN 141
++L +IP Y ++ Y +INLN
Sbjct: 1034 IYLLSIPSMYLLLILYSIINLN 1055
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 76 VHL*TIPLNYKHILSYLVINLN 141
++L +IP Y ++ Y +INLN
Sbjct: 1034 IYLLSIPSMYLLLILYSIINLN 1055
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 76 VHL*TIPLNYKHILSYLVINLN 141
++L +IP Y ++ Y +INLN
Sbjct: 1034 IYLLSIPSMYLLLILYSIINLN 1055
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 76 VHL*TIPLNYKHILSYLVINLN 141
++L +IP Y ++ Y +INLN
Sbjct: 1034 IYLLSIPSMYLLLILYSIINLN 1055
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 293 VFAFCYFFFL 322
VF FCYF +L
Sbjct: 144 VFVFCYFIYL 153
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 547 NCFSWTPIIHSNHWFTEI 600
N F W I+ SN+ FT I
Sbjct: 103 NVFFWVIILMSNYAFTRI 120
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 481 FTHCCSK*FAVWFTQKTC 534
F++ C VW T +TC
Sbjct: 332 FSNACEVMAIVWITSETC 349
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 481 FTHCCSK*FAVWFTQKTC 534
F++ C VW T +TC
Sbjct: 332 FSNACEVMAIVWITSETC 349
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,854
Number of Sequences: 336
Number of extensions: 3577
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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