Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16e09
(746 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060893-1|AAL28441.1| 424|Drosophila melanogaster GM04690p pro... 140 2e-33
AY071629-1|AAL49251.1| 424|Drosophila melanogaster RE67594p pro... 138 7e-33
AE014296-567|AAF47719.1| 424|Drosophila melanogaster CG1291-PA ... 138 7e-33
AY113436-1|AAM29441.1| 475|Drosophila melanogaster RE27026p pro... 37 0.025
AY061012-1|AAL28560.1| 475|Drosophila melanogaster HL02815p pro... 37 0.025
AE014296-3590|AAF51756.2| 475|Drosophila melanogaster CG11306-P... 37 0.025
AE013599-629|AAF59106.1| 284|Drosophila melanogaster CG14755-PA... 31 2.2
BT003585-1|AAO39589.1| 687|Drosophila melanogaster LD11102p pro... 29 5.1
AE014297-2294|AAF55379.3| 682|Drosophila melanogaster CG18213-P... 29 5.1
>AY060893-1|AAL28441.1| 424|Drosophila melanogaster GM04690p
protein.
Length = 424
Score = 140 bits (339), Expect = 2e-33
Identities = 65/122 (53%), Positives = 83/122 (68%)
Frame = -3
Query: 738 ELEIDDKITFMKSPKDDEKISLLHNCKALVYTPSNEHFGIVPLEAMYFCKPVIAVNNGGP 559
EL++ D + ++SP D+EK LL L+YTP NEHFGIVPLE MY KPV+A+N+GGP
Sbjct: 287 ELKLQDHVVLLRSPTDEEKCRLLFAAHCLLYTPENEHFGIVPLEGMYCSKPVVALNSGGP 346
Query: 558 TETVVNEVTGFLCEPNSKSFATAMSKLVLNPDLIERFGQAGLKRFETNFSFDAFTEQLDG 379
TETVVN TGFLCE KSF AM +L + L + G G KR + FSF AF ++L+G
Sbjct: 347 TETVVNTSTGFLCEKTEKSFGGAMLQLFRDEQLRVKMGDQGHKRVQQKFSFQAFADRLNG 406
Query: 378 IL 373
I+
Sbjct: 407 II 408
>AY071629-1|AAL49251.1| 424|Drosophila melanogaster RE67594p
protein.
Length = 424
Score = 138 bits (334), Expect = 7e-33
Identities = 64/122 (52%), Positives = 83/122 (68%)
Frame = -3
Query: 738 ELEIDDKITFMKSPKDDEKISLLHNCKALVYTPSNEHFGIVPLEAMYFCKPVIAVNNGGP 559
EL++ D + ++SP D+EK LL L+YTP NEHFGIVPLE MY KPV+A+N+GGP
Sbjct: 287 ELKLQDHVVLLRSPTDEEKCRLLFAAHCLLYTPENEHFGIVPLEGMYCSKPVVALNSGGP 346
Query: 558 TETVVNEVTGFLCEPNSKSFATAMSKLVLNPDLIERFGQAGLKRFETNFSFDAFTEQLDG 379
TETVV+ TGFLCE KSF AM +L + L + G G KR + FSF AF ++L+G
Sbjct: 347 TETVVSTSTGFLCEKTEKSFGGAMLQLFRDEQLRVKMGDQGHKRVQQKFSFQAFADRLNG 406
Query: 378 IL 373
I+
Sbjct: 407 II 408
>AE014296-567|AAF47719.1| 424|Drosophila melanogaster CG1291-PA
protein.
Length = 424
Score = 138 bits (334), Expect = 7e-33
Identities = 64/122 (52%), Positives = 83/122 (68%)
Frame = -3
Query: 738 ELEIDDKITFMKSPKDDEKISLLHNCKALVYTPSNEHFGIVPLEAMYFCKPVIAVNNGGP 559
EL++ D + ++SP D+EK LL L+YTP NEHFGIVPLE MY KPV+A+N+GGP
Sbjct: 287 ELKLQDHVVLLRSPTDEEKCRLLFAAHCLLYTPENEHFGIVPLEGMYCSKPVVALNSGGP 346
Query: 558 TETVVNEVTGFLCEPNSKSFATAMSKLVLNPDLIERFGQAGLKRFETNFSFDAFTEQLDG 379
TETVV+ TGFLCE KSF AM +L + L + G G KR + FSF AF ++L+G
Sbjct: 347 TETVVSTSTGFLCEKTEKSFGGAMLQLFRDEQLRVKMGDQGHKRVQQKFSFQAFADRLNG 406
Query: 378 IL 373
I+
Sbjct: 407 II 408
>AY113436-1|AAM29441.1| 475|Drosophila melanogaster RE27026p
protein.
Length = 475
Score = 37.1 bits (82), Expect = 0.025
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = -3
Query: 735 LEIDDKITFMKSPKDDEKISLLHNCKALVYTPSNEHFGIVPLEAMYFCKPVIAVNNGGP- 559
L +++ + F + ++ + L ++T NEHFGI +E+M ++A +GGP
Sbjct: 346 LSLENNVQFSVNVPYEDLLKLYQTAHIGIHTMWNEHFGIGIVESMAAGLIMVAHKSGGPL 405
Query: 558 ---TETVVNEVTGFLCEPNSKSFATAMSKLVLNPDL--IERFGQAGLKRF 424
ET GFL + ++ +V N ++ I +A ++RF
Sbjct: 406 LDIVETSAGSQNGFLATDAVEYAENILNIIVNNSEMNGIRNAARASVERF 455
>AY061012-1|AAL28560.1| 475|Drosophila melanogaster HL02815p
protein.
Length = 475
Score = 37.1 bits (82), Expect = 0.025
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = -3
Query: 735 LEIDDKITFMKSPKDDEKISLLHNCKALVYTPSNEHFGIVPLEAMYFCKPVIAVNNGGP- 559
L +++ + F + ++ + L ++T NEHFGI +E+M ++A +GGP
Sbjct: 346 LSLENNVQFSVNVPYEDLLKLYQTAHIGIHTMWNEHFGIGIVESMAAGLIMVAHKSGGPL 405
Query: 558 ---TETVVNEVTGFLCEPNSKSFATAMSKLVLNPDL--IERFGQAGLKRF 424
ET GFL + ++ +V N ++ I +A ++RF
Sbjct: 406 LDIVETSAGSQNGFLATDAVEYAENILNIIVNNSEMNGIRNAARASVERF 455
>AE014296-3590|AAF51756.2| 475|Drosophila melanogaster CG11306-PA
protein.
Length = 475
Score = 37.1 bits (82), Expect = 0.025
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = -3
Query: 735 LEIDDKITFMKSPKDDEKISLLHNCKALVYTPSNEHFGIVPLEAMYFCKPVIAVNNGGP- 559
L +++ + F + ++ + L ++T NEHFGI +E+M ++A +GGP
Sbjct: 346 LSLENNVQFSVNVPYEDLLKLYQTAHIGIHTMWNEHFGIGIVESMAAGLIMVAHKSGGPL 405
Query: 558 ---TETVVNEVTGFLCEPNSKSFATAMSKLVLNPDL--IERFGQAGLKRF 424
ET GFL + ++ +V N ++ I +A ++RF
Sbjct: 406 LDIVETSAGSQNGFLATDAVEYAENILNIIVNNSEMNGIRNAARASVERF 455
>AE013599-629|AAF59106.1| 284|Drosophila melanogaster CG14755-PA
protein.
Length = 284
Score = 30.7 bits (66), Expect = 2.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 323 SSYSTPRASETICLSLVKIPSNCSVNASK 409
SS S+ ++ T C + +PSNCS NA+K
Sbjct: 145 SSSSSATSTLTSCTTAAVVPSNCSTNANK 173
>BT003585-1|AAO39589.1| 687|Drosophila melanogaster LD11102p
protein.
Length = 687
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 239 IQQFTLFIHSHTMSNIVGVFA-FCYFFFLSSYSTPRASETICLSLVKIPSNCSVNASKEK 415
+Q F ++NI F F Y +F +T + T+C++L NC K
Sbjct: 564 LQIFNTSQRCQLLTNIAKYFQQFVYQYFHKIENTVQLKSTLCVTLKAFKQNCGTKNIKAI 623
Query: 416 FVSN 427
F+ N
Sbjct: 624 FLPN 627
>AE014297-2294|AAF55379.3| 682|Drosophila melanogaster CG18213-PA
protein.
Length = 682
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 239 IQQFTLFIHSHTMSNIVGVFA-FCYFFFLSSYSTPRASETICLSLVKIPSNCSVNASKEK 415
+Q F ++NI F F Y +F +T + T+C++L NC K
Sbjct: 564 LQIFNTSQRCQLLTNIAKYFQQFVYQYFHKIENTVQLKSTLCVTLKAFKQNCGTKNIKAI 623
Query: 416 FVSN 427
F+ N
Sbjct: 624 FLPN 627
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,079,696
Number of Sequences: 53049
Number of extensions: 576817
Number of successful extensions: 1338
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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