Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc16e01
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    27   0.23 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    27   0.23 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.54 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   5.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   6.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   6.7  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   8.8  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 534 RTENLIFFMCVAVVTNGTTFE 596
           RT +  F M VAV+++GTTF+
Sbjct: 76  RTGSFTFLMVVAVLSSGTTFK 96


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 534 RTENLIFFMCVAVVTNGTTFE 596
           RT +  F M VAV+++GTTF+
Sbjct: 76  RTGSFTFLMVVAVLSSGTTFK 96


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 603 KVIGFFFILLCQLQH*RIPLARLY*YYKITL 695
           ++ GF  I+ C +Q   I  A  Y YY I++
Sbjct: 532 RIFGFIIIIGCLIQFNTIVFAFCYCYYSISI 562


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 545 FNFFYVCCCGY 577
           FN FY+C C Y
Sbjct: 319 FNLFYLCFCFY 329


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 545 FNFFYVCCCGY 577
           FN FY+C C Y
Sbjct: 275 FNLFYLCFCFY 285


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 689 NVVYTMKCQN*NNVIMNEIF 748
           N+VY   C N  NV + ++F
Sbjct: 156 NLVYVYCCDNNFNVFLRQVF 175


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 257 YFYCLSYTCYIRFSHGLLFNK 195
           Y +C S + Y  F  G+L N+
Sbjct: 72  YLFCASLSFYKAFKIGILLNQ 92


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 330 FQIQCMLIFLSTIVISVREV 271
           + + C+LI L+TIV S   V
Sbjct: 281 YSMYCLLILLTTIVASYGSV 300


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 330 FQIQCMLIFLSTIVISVREV 271
           + + C+LI L+TIV S   V
Sbjct: 281 YSMYCLLILLTTIVASYGSV 300


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 430 RSARVATERSCFNKILMVNYIFFLYRSNACS 338
           R   V  +R   +K L++NYI  L     CS
Sbjct: 37  RYDNVDVDRILHSKRLLLNYINCLLEKGPCS 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,677
Number of Sequences: 336
Number of extensions: 3406
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)