Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16d24
(709 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657 36 0.024
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 36 0.032
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 35 0.055
02_05_0938 + 32901143-32901215,32901841-32901982,32902243-329023... 33 0.17
08_01_1050 - 10649434-10651917 33 0.22
11_06_0234 + 21574380-21575197,21576131-21576190,21578320-215800... 32 0.39
11_06_0145 - 20615044-20617167,20617444-20618076 31 0.68
10_08_0247 - 16151969-16152091,16152599-16152718,16153480-161535... 31 0.68
03_02_0482 + 8798931-8799024,8799118-8799253,8799435-8799506,879... 31 1.2
11_08_0026 + 27752519-27755441,27755538-27755923 30 1.6
08_01_0312 + 2764744-2767390,2767632-2767990 30 1.6
11_06_0130 - 20408835-20411771 30 2.1
11_06_0128 - 20389375-20389781,20389988-20392787 30 2.1
02_01_0412 - 3005600-3007759 30 2.1
08_02_1619 - 28283250-28285238 29 2.7
06_01_0921 + 7104923-7105396,7106624-7106768,7107078-7107121 29 2.7
02_01_0413 - 3028946-3031111 29 2.7
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 29 3.6
05_04_0399 - 20955319-20955838,20955939-20956201 29 3.6
11_06_0344 + 22540436-22540737,22541304-22543545 29 4.8
06_01_0721 - 5255422-5255790,5256287-5256660,5256845-5257192,525... 29 4.8
03_02_0661 + 10247128-10247895 29 4.8
02_01_0429 - 3132848-3135043 29 4.8
02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,311... 29 4.8
11_06_0613 - 25509044-25509118,25509256-25511275,25511632-25512467 28 6.3
07_01_0394 - 2979222-2979520,2979534-2979736,2980708-2980886,298... 28 6.3
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 28 6.3
02_04_0185 - 20748206-20748405,20749067-20749232,20749373-207494... 28 6.3
02_02_0061 + 6468190-6471046,6471318-6471736 28 6.3
02_01_0408 - 2972240-2975380 28 6.3
09_02_0283 + 6819086-6820270 28 8.4
03_02_0091 + 5574528-5577254 28 8.4
03_01_0599 + 4416441-4416549,4416854-4417394,4417476-4417939,441... 28 8.4
03_01_0457 - 3506709-3506717,3507386-3507484,3507701-3508034,350... 28 8.4
02_05_0061 + 25506648-25509399,25509564-25509901,25510392-255105... 28 8.4
02_01_0426 + 3113443-3114220,3119557-3119693,3119831-3120817 28 8.4
02_01_0411 - 2998806-3000938 28 8.4
01_05_0620 + 23742950-23743794,23745705-23746508,23746593-23747793 28 8.4
01_01_0779 - 6030245-6031780 28 8.4
>02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657
Length = 1136
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/28 (67%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRL-VVLPPEIGTL 628
LG L LR LHL GNRL VLPPE+G L
Sbjct: 98 LGNLTYLRRLHLAGNRLHGVLPPELGGL 125
>07_03_0627 -
20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLVVLPPEIGTL 628
L +LA L +LHL N+L VLPPE+G L
Sbjct: 268 LTRLALLEKLHLDNNKLSVLPPEVGDL 294
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 35.1 bits (77), Expect = 0.055
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = -2
Query: 699 LARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGN 586
L L EL L N + LPPE+G L+ N VL+L+GN
Sbjct: 542 LTSLIELDLSDNNITTLPPELGLLE--PNLQVLKLDGN 577
>02_05_0938 +
32901143-32901215,32901841-32901982,32902243-32902314,
32902573-32902644,32902711-32902782,32902913-32902948,
32903001-32903072,32903319-32903387,32903483-32903554,
32903668-32903739,32903838-32903909,32904153-32904224,
32904470-32904541,32904623-32904694,32904782-32904853,
32904911-32905003,32905150-32905218,32905315-32905386,
32905479-32905552,32905643-32905771,32905966-32906331,
32906584-32906954,32907522-32907890
Length = 884
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLV-VLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQL 556
LG L +L+LQGNRL +PPE+G + S L L N PI D +
Sbjct: 242 LGNLTYTEKLYLQGNRLTGSIPPELGNM---STLHYLNLANNNLEGPIPDNI 290
>08_01_1050 - 10649434-10651917
Length = 827
Score = 33.1 bits (72), Expect = 0.22
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLD 529
+G+LARLR L L GNRL LP ++ ++ ++ L L N I L P+++++
Sbjct: 79 VGKLARLRSLDLSGNRLAALPNDL--WEVGASLLELNLSRN----AIRGDL---PNNIVN 129
Query: 528 YLRSETYKVLYSRHMSAKPP 469
+ + V ++ A PP
Sbjct: 130 FAALQVLDVSHNAFSGALPP 149
>11_06_0234 +
21574380-21575197,21576131-21576190,21578320-21580053,
21581859-21582006
Length = 919
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLVVLPPEIGTL 628
+G+L RLR L L+G R+ LP EIG L
Sbjct: 612 IGKLQRLRYLGLRGTRITELPSEIGDL 638
>11_06_0145 - 20615044-20617167,20617444-20618076
Length = 918
Score = 31.5 bits (68), Expect = 0.68
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLVVLP----PEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPS 541
LG L RLR LHL+ N +V+P P++ L++ S L+ + + PI + +++
Sbjct: 583 LGCLTRLRHLHLRNNPNLVIPNGILPKLQNLEVLDVCSFNLLQCSSYEAPINELVRMDKL 642
Query: 540 HVLDY-LRSET 511
L +RSET
Sbjct: 643 QSLGITVRSET 653
>10_08_0247 -
16151969-16152091,16152599-16152718,16153480-16153545,
16153663-16153711,16154048-16154185,16154291-16154377,
16155658-16155758,16155847-16155957,16156606-16157025,
16157819-16157983,16158863-16158994,16159189-16159233
Length = 518
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLVVLPPEIGTL 628
LG + LREL + NRL LP EIG L
Sbjct: 362 LGSITHLRELRIANNRLENLPVEIGLL 388
>03_02_0482 +
8798931-8799024,8799118-8799253,8799435-8799506,
8799583-8799654,8799798-8799869,8800133-8800204,
8800530-8800627,8800892-8801062,8801141-8801473,
8802494-8802739,8802884-8803017,8803132-8803344
Length = 570
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLVVLPP-------EIGTLDLASNKSVLRLEGNFWVPPIEDQL 556
LG +L++L+LQGN L P E+GTLDL+SN L G+ +PP D+L
Sbjct: 116 LGNCTKLQQLYLQGNYLSGHIPSEFGDLVELGTLDLSSN----TLSGS--IPPSLDKL 167
>11_08_0026 + 27752519-27755441,27755538-27755923
Length = 1102
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2
Query: 705 GQLARLRELHLQGNRLV-VLPPEIGTLDLASNKSVLRLEGN 586
GQL +L +LHL N+L +P +G + S ++L LEGN
Sbjct: 370 GQLGKLEKLHLSQNQLTGTIPASLGNM---SELAMLVLEGN 407
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/28 (60%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLV-VLPPEIGTL 628
+GQL RLR LHL GN L LP E+G L
Sbjct: 197 VGQLRRLRFLHLAGNALSGRLPRELGEL 224
>11_06_0130 - 20408835-20411771
Length = 978
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLV-VLPPEIGTLDLASNKSVLRLEGN 586
LG L+ L +LHL GN L +PPE+G L S L + GN
Sbjct: 104 LGNLSFLAKLHLGGNHLSGEIPPELGRL---SRLRRLNMSGN 142
>11_06_0128 - 20389375-20389781,20389988-20392787
Length = 1068
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLV-VLPPEIGTL 628
L L+ LREL L GN+L +PPEIG L
Sbjct: 108 LANLSFLRELDLAGNQLAGEIPPEIGRL 135
>02_01_0412 - 3005600-3007759
Length = 719
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLV-VLPPEIG------TLDLASNK 610
+GQL RL ELH+ N L LP +G T++L+SNK
Sbjct: 297 IGQLKRLEELHMSSNNLSGELPSSLGECTYLVTINLSSNK 336
>08_02_1619 - 28283250-28285238
Length = 662
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLV-VLPPEIGTLDLASNK-SVLRLEGNFWVPPIEDQLKLGPSHV 535
LG L L L NRL LP I L + + S+LRL GN PI D L P+
Sbjct: 139 LGNAPALSLLDLASNRLSGSLPLSIWNLCSGNARLSLLRLHGNALHGPIPDPAALAPNTT 198
Query: 534 LDYL 523
D L
Sbjct: 199 CDAL 202
>06_01_0921 + 7104923-7105396,7106624-7106768,7107078-7107121
Length = 220
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = -2
Query: 600 RLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAKPPPPPQTVDK 445
R+E +W + ++ P H Y+ T +V + PPPPP ++
Sbjct: 20 RVERLYWATTAAEVMRANPGH---YVALVTLRVAEEKRPPPPPPPPPARAER 68
>02_01_0413 - 3028946-3031111
Length = 721
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLV-VLPPEIG------TLDLASNK 610
+GQL RL ELH++ N + LPP +G T++L NK
Sbjct: 298 IGQLKRLEELHMEENNISGELPPTLGDCTNLVTINLKKNK 337
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/63 (22%), Positives = 31/63 (49%)
Frame = -2
Query: 690 LRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLRSET 511
+R++ G R +++PPE+G D K++L++ + + +GPS + E
Sbjct: 109 IRDMKPGGKRRIIIPPELGPPDTV-GKALLKISSIIKIEDVFAGTLVGPSTFFSAKQFEV 167
Query: 510 YKV 502
+ +
Sbjct: 168 FDI 170
>05_04_0399 - 20955319-20955838,20955939-20956201
Length = 260
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 480 AKPPPPPQTVDKSKKASRAA 421
AKPPPPP+ VD S R++
Sbjct: 165 AKPPPPPRPVDSSDDGCRSS 184
>11_06_0344 + 22540436-22540737,22541304-22543545
Length = 847
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2
Query: 705 GQLARLRELHLQGNRLVVLPPEIGTL 628
G+L LR L L+ R+ LPPEIG L
Sbjct: 451 GKLFLLRYLSLRNTRISELPPEIGML 476
>06_01_0721 -
5255422-5255790,5256287-5256660,5256845-5257192,
5257369-5257497,5257585-5257658,5257745-5257816,
5257901-5257969,5258059-5258130,5258208-5258279,
5258512-5258583,5258735-5258806,5258887-5258958,
5259050-5259121,5259203-5259274,5259427-5259498,
5259599-5259670,5259764-5259832,5260072-5260143,
5260428-5260499,5260579-5260650,5260919-5260990,
5261015-5261161,5261249-5261378,5262212-5262290
Length = 931
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLV-VLPPEIGTL 628
LG L +L++QGN+L +PPE+G +
Sbjct: 277 LGNLTYTEKLYMQGNKLTGPIPPELGNM 304
>03_02_0661 + 10247128-10247895
Length = 255
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 534 LDYLRSETYKVLYSRHMSAK-PPPPPQTVDKSKKASRAA 421
LDYL+ K SR A PPPPP +VD+ + R A
Sbjct: 78 LDYLKKRL-KAERSRSKGAPAPPPPPPSVDRLRALLRLA 115
>02_01_0429 - 3132848-3135043
Length = 731
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGNF 583
+GQL RL+ELHL N L P TL +N +L L+ N+
Sbjct: 298 IGQLKRLKELHLGENYLYGELP--STLGNCTNLKILDLKINY 337
>02_01_0425 -
3102629-3104692,3106505-3108546,3109918-3109989,
3110157-3111444
Length = 1821
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGNF 583
+GQL RL+ELHL N L P TL +N +L L+ N+
Sbjct: 721 IGQLKRLKELHLGENYLYGELP--STLGNCTNLKILDLKINY 760
>11_06_0613 - 25509044-25509118,25509256-25511275,25511632-25512467
Length = 976
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLK 553
LG L LR L L + LP EIG L V R +PP QL+
Sbjct: 609 LGNLFHLRYLRLHCGCITKLPNEIGNLQFLQTLDVHRSRSIKELPPAIYQLR 660
>07_01_0394 -
2979222-2979520,2979534-2979736,2980708-2980886,
2980990-2981295
Length = 328
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 695 RASASCTCRGTASSCCRRRSEHWTSPAT 612
R S C R ASSC RR S + SP +
Sbjct: 15 RCSTECPRRAAASSCIRRASLPYCSPGS 42
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 580 GSAHRRPAQAGAVPRAGLS-ALRDLQSPVQPP 488
GSA RPA+AG PR LS A P QPP
Sbjct: 63 GSALPRPARAGFPPRCPLSHASTAAPFPTQPP 94
>02_04_0185 -
20748206-20748405,20749067-20749232,20749373-20749471,
20749487-20749561,20749663-20749743,20750121-20750274,
20750330-20750425,20750518-20750727,20750746-20750957
Length = 430
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -2
Query: 594 EGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAKPPPPPQTV 451
E F ++ L++ D+ R K+L+ R S +PPPPP ++
Sbjct: 13 EREFIERALQSDLRVDGRRPFDFRR---LKILFGRSPSLRPPPPPPSM 57
>02_02_0061 + 6468190-6471046,6471318-6471736
Length = 1091
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRL-VVLPPEIGTL-DLAS-NKSVLRLEG 589
LG L LR LHL NRL +P E+G L DL N+S ++G
Sbjct: 37 LGNLTYLRRLHLHKNRLHGEIPSELGHLRDLRHLNRSYNSIQG 79
>02_01_0408 - 2972240-2975380
Length = 1046
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRL-VVLPPEIG 634
+GQL+RL+ELHL N L LP +G
Sbjct: 297 IGQLSRLQELHLDNNNLHGELPSALG 322
>09_02_0283 + 6819086-6820270
Length = 394
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 629 WTSPATSQC*GWKVTSGFRPSKTSSSWG 546
W PA Q W TS RP T S+WG
Sbjct: 222 WFDPAKQQ---WGPTSRLRPDATVSTWG 246
>03_02_0091 + 5574528-5577254
Length = 908
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLVVLPPEIGTL 628
+G LA LR L+L L +PPE+G L
Sbjct: 598 IGTLASLRYLNLSSTPLESVPPELGRL 624
>03_01_0599 +
4416441-4416549,4416854-4417394,4417476-4417939,
4418361-4418496,4418616-4418687,4418777-4418845,
4418940-4419011,4419101-4419172,4419359-4419416
Length = 530
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLV-VLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGP 544
L + L ELH +GN+L + P +GTL +N L L N I + LK P
Sbjct: 455 LSSMHILEELHFEGNQLSGPISPSLGTL---TNLKELYLNNNNLTGQIPESLKNKP 507
>03_01_0457 -
3506709-3506717,3507386-3507484,3507701-3508034,
3508241-3508443,3508519-3508632,3508707-3508817,
3508907-3509016,3509132-3509241,3509450-3509628,
3509746-3509907,3509996-3510114,3510336-3510423,
3510520-3510625,3510769-3510857,3511211-3511354,
3511459-3511518,3511534-3511656,3511745-3511811,
3511941-3512053,3512140-3512235,3512651-3512818
Length = 867
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 632 HWTSPATSQC*GWKVTSGFRPSKTSSSWGRPT 537
+WT+ A C G T +R K + G+PT
Sbjct: 687 YWTAYAEGDCKGCHYTGSYRAPKCQAGCGQPT 718
>02_05_0061 +
25506648-25509399,25509564-25509901,25510392-25510593,
25510779-25510854,25512036-25512294
Length = 1208
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLV-VLPPEI 637
LG+L RLREL+L GN L +PP +
Sbjct: 122 LGRLGRLRELNLSGNSLEGGIPPAL 146
>02_01_0426 + 3113443-3114220,3119557-3119693,3119831-3120817
Length = 633
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 705 GQLARLRELHLQGNRLV-VLPPEIGTLDLASNKSVLRLEGN 586
GQL RL ELHL NR+ LP +G +N ++ L+ N
Sbjct: 260 GQLKRLEELHLDYNRMSGELPSALGN---CTNLKIINLKYN 297
>02_01_0411 - 2998806-3000938
Length = 710
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLV-VLPPEIG 634
+GQL RL+ELH+ N L LP +G
Sbjct: 287 IGQLKRLKELHISSNNLSGELPASLG 312
>01_05_0620 + 23742950-23743794,23745705-23746508,23746593-23747793
Length = 949
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 708 LGQLARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGNFWVPP 571
+G+L+ LR L L+ + LP EIG L + + G +PP
Sbjct: 586 VGKLSHLRYLGLRRTYIAELPTEIGNLKVLQTLDIRGAHGIRELPP 631
>01_01_0779 - 6030245-6031780
Length = 511
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 546 PSHVLDYLRSETYKVLYSRHMSAKPPPPPQTVD 448
P +LDYL ET + + +A PPPP T D
Sbjct: 274 PECLLDYLMQETVREI-DEATAAGLPPPPHTSD 305
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,650,056
Number of Sequences: 37544
Number of extensions: 343741
Number of successful extensions: 2136
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2085
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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