Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc16d19
         (827 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.2  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.2  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   2.2  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   2.2  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   2.2  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   9.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.0  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 725 GIWYRPRLAVRRFVFFVNINY 787
           G +Y+P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 725 GIWYRPRLAVRRFVFFVNINY 787
           G +Y+P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 725 GIWYRPRLAVRRFVFFVNINY 787
           G +Y+P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 725 GIWYRPRLAVRRFVFFVNINY 787
           G +Y+P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 725 GIWYRPRLAVRRFVFFVNINY 787
           G +Y+P   + + + FVN+NY
Sbjct: 128 GSFYQPDYFIDKNIVFVNLNY 148


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 555 VHSTCGITSSSSHACN 602
           +H+TCG  ++  HA N
Sbjct: 356 LHATCGTKNALLHAVN 371


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 131 NFVKHVHGVGHIVAAKYHV 187
           N   H H  GH + A++HV
Sbjct: 318 NNQNHHHHAGHHIHAQHHV 336


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,557
Number of Sequences: 336
Number of extensions: 4171
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)