Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16d15
(437 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113521-1|AAM29526.1| 91|Drosophila melanogaster RE60135p pro... 142 2e-34
AE014296-1060|AAF50703.1| 91|Drosophila melanogaster CG6610-PA... 142 2e-34
L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprot... 41 6e-04
AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p pro... 41 6e-04
AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA... 41 6e-04
BT023632-1|AAY85032.1| 95|Drosophila melanogaster IP05684p pro... 40 0.001
AE014296-355|AAF47567.1| 95|Drosophila melanogaster CG2021-PA ... 40 0.001
AY070698-1|AAL48169.1| 76|Drosophila melanogaster RH35475p pro... 38 0.005
AE014298-2437|AAF48634.1| 76|Drosophila melanogaster CG9742-PA... 38 0.005
BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p pro... 36 0.018
AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-P... 36 0.018
BT003597-1|AAO39600.1| 94|Drosophila melanogaster GM19936p pro... 36 0.024
AE014134-1360|AAF52576.1| 94|Drosophila melanogaster CG18591-P... 36 0.024
BT025925-1|ABG02169.1| 287|Drosophila melanogaster IP12320p pro... 33 0.22
AY113637-1|AAM29642.1| 110|Drosophila melanogaster RH73529p pro... 33 0.22
AE014134-2763|AAF53562.1| 110|Drosophila melanogaster CG13277-P... 33 0.22
BT011152-1|AAR82820.1| 93|Drosophila melanogaster GH05922p pro... 31 0.52
AE014296-2128|AAF49929.1| 95|Drosophila melanogaster CG10418-P... 31 0.52
AY069315-1|AAL39460.1| 119|Drosophila melanogaster LD03002p pro... 31 0.69
AE014297-442|AAF54135.1| 119|Drosophila melanogaster CG1249-PA ... 31 0.69
AE013599-1887|AAM71005.2| 173|Drosophila melanogaster CG30074-P... 31 0.91
AY071359-1|AAL48981.1| 124|Drosophila melanogaster RE39488p pro... 29 2.1
AE014296-2169|AAF49893.1| 124|Drosophila melanogaster CG10753-P... 29 2.1
AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-P... 27 8.4
>AY113521-1|AAM29526.1| 91|Drosophila melanogaster RE60135p
protein.
Length = 91
Score = 142 bits (344), Expect = 2e-34
Identities = 65/71 (91%), Positives = 69/71 (97%)
Frame = -2
Query: 238 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 59
VDKCIGSRIHIIMKNDKEMVGTL GFDDFVNMLLDDVTEYE+TP+GR+ITKLDQILLNGN
Sbjct: 19 VDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEYENTPDGRRITKLDQILLNGN 78
Query: 58 NIAMLVPGGEM 26
NI MLVPGGE+
Sbjct: 79 NITMLVPGGEL 89
>AE014296-1060|AAF50703.1| 91|Drosophila melanogaster CG6610-PA
protein.
Length = 91
Score = 142 bits (344), Expect = 2e-34
Identities = 65/71 (91%), Positives = 69/71 (97%)
Frame = -2
Query: 238 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 59
VDKCIGSRIHIIMKNDKEMVGTL GFDDFVNMLLDDVTEYE+TP+GR+ITKLDQILLNGN
Sbjct: 19 VDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEYENTPDGRRITKLDQILLNGN 78
Query: 58 NIAMLVPGGEM 26
NI MLVPGGE+
Sbjct: 79 NITMLVPGGEL 89
>L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprotein
protein.
Length = 199
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = -2
Query: 217 RIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEY-------ESTPEGRKITKLDQILLNGN 59
R+ I++++ + +GT + FD +N++L D E+ PE + L +LL G
Sbjct: 16 RVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGE 75
Query: 58 NIAMLVPGGEMPGE 17
NI L G P E
Sbjct: 76 NIVSLTVEGPPPPE 89
>AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p
protein.
Length = 199
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = -2
Query: 217 RIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEY-------ESTPEGRKITKLDQILLNGN 59
R+ I++++ + +GT + FD +N++L D E+ PE + L +LL G
Sbjct: 16 RVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGE 75
Query: 58 NIAMLVPGGEMPGE 17
NI L G P E
Sbjct: 76 NIVSLTVEGPPPPE 89
>AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA
protein.
Length = 199
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = -2
Query: 217 RIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEY-------ESTPEGRKITKLDQILLNGN 59
R+ I++++ + +GT + FD +N++L D E+ PE + L +LL G
Sbjct: 16 RVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGE 75
Query: 58 NIAMLVPGGEMPGE 17
NI L G P E
Sbjct: 76 NIVSLTVEGPPPPE 89
>BT023632-1|AAY85032.1| 95|Drosophila melanogaster IP05684p
protein.
Length = 95
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = -2
Query: 238 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE-YESTPEGRKITKLDQILLNG 62
++ I + II + + +GTL+GFD +N+++D+ E ST G + L ++ G
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRG 63
Query: 61 NNIAML 44
+NIA++
Sbjct: 64 DNIAVI 69
>AE014296-355|AAF47567.1| 95|Drosophila melanogaster CG2021-PA
protein.
Length = 95
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = -2
Query: 238 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTE-YESTPEGRKITKLDQILLNG 62
++ I + II + + +GTL+GFD +N+++D+ E ST G + L ++ G
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRG 63
Query: 61 NNIAML 44
+NIA++
Sbjct: 64 DNIAVI 69
>AY070698-1|AAL48169.1| 76|Drosophila melanogaster RH35475p
protein.
Length = 76
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = -2
Query: 238 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 59
V K + R+ + + + + G L+GFD F+N++LDD E + K + +++ GN
Sbjct: 9 VKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTV--EECKDNTK-NNIGMVVIRGN 65
Query: 58 NIAML 44
+I M+
Sbjct: 66 SIVMV 70
>AE014298-2437|AAF48634.1| 76|Drosophila melanogaster CG9742-PA
protein.
Length = 76
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = -2
Query: 238 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGN 59
V K + R+ + + + + G L+GFD F+N++LDD E + K + +++ GN
Sbjct: 9 VKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTV--EECKDNTK-NNIGMVVIRGN 65
Query: 58 NIAML 44
+I M+
Sbjct: 66 SIVMV 70
>BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p
protein.
Length = 103
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -2
Query: 226 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPE 104
+ ++++ M+N++E+ G L FD +NM+L D E +T E
Sbjct: 26 LDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVE 66
>AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-PA
protein.
Length = 103
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -2
Query: 226 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPE 104
+ ++++ M+N++E+ G L FD +NM+L D E +T E
Sbjct: 26 LDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVE 66
>BT003597-1|AAO39600.1| 94|Drosophila melanogaster GM19936p
protein.
Length = 94
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -2
Query: 178 GTLQGFDDFVNMLLDDVTE-YESTPEGRKITKLDQILLNGNNIAML 44
G + GFD+++N++LDD E Y T + R L +I+L G+NI ++
Sbjct: 44 GHIVGFDEYMNLVLDDAEEVYVKTRQRR---NLGRIMLKGDNITLI 86
>AE014134-1360|AAF52576.1| 94|Drosophila melanogaster CG18591-PA
protein.
Length = 94
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -2
Query: 178 GTLQGFDDFVNMLLDDVTE-YESTPEGRKITKLDQILLNGNNIAML 44
G + GFD+++N++LDD E Y T + R L +I+L G+NI ++
Sbjct: 44 GHIVGFDEYMNLVLDDAEEVYVKTRQRR---NLGRIMLKGDNITLI 86
>BT025925-1|ABG02169.1| 287|Drosophila melanogaster IP12320p
protein.
Length = 287
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Frame = -2
Query: 238 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEY-ESTPEGRKITK-----LDQ 77
+ K + +I + +E G L+G+D +N++LD+ EY + E K+T+ L
Sbjct: 201 LSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLGL 260
Query: 76 ILLNGNNIAMLVP 38
++ G + ++ P
Sbjct: 261 VVCRGTALVLICP 273
>AY113637-1|AAM29642.1| 110|Drosophila melanogaster RH73529p
protein.
Length = 110
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Frame = -2
Query: 238 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEY-ESTPEGRKITK-----LDQ 77
+ K + +I + +E G L+G+D +N++LD+ EY + E K+T+ L
Sbjct: 24 LSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLGL 83
Query: 76 ILLNGNNIAMLVP 38
++ G + ++ P
Sbjct: 84 VVCRGTALVLICP 96
>AE014134-2763|AAF53562.1| 110|Drosophila melanogaster CG13277-PA
protein.
Length = 110
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Frame = -2
Query: 238 VDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEY-ESTPEGRKITK-----LDQ 77
+ K + +I + +E G L+G+D +N++LD+ EY + E K+T+ L
Sbjct: 24 LSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLGL 83
Query: 76 ILLNGNNIAMLVP 38
++ G + ++ P
Sbjct: 84 VVCRGTALVLICP 96
>BT011152-1|AAR82820.1| 93|Drosophila melanogaster GH05922p
protein.
Length = 93
Score = 31.5 bits (68), Expect = 0.52
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 231 LSTSSRGSNVFGFGNELCVIFFLRTKISWNLFTVMT 338
++T+ G +FGFG LCV K++ LF V+T
Sbjct: 17 VATTKHGQQLFGFGASLCVFIMYAVKLA-TLFRVIT 51
>AE014296-2128|AAF49929.1| 95|Drosophila melanogaster CG10418-PA
protein.
Length = 95
Score = 31.5 bits (68), Expect = 0.52
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2
Query: 226 IGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVT 125
+G + + +KND + GTL D ++N+ L D++
Sbjct: 11 VGKEVVVELKNDLSICGTLHSVDQYLNIKLTDIS 44
>AY069315-1|AAL39460.1| 119|Drosophila melanogaster LD03002p
protein.
Length = 119
Score = 31.1 bits (67), Expect = 0.69
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Frame = -2
Query: 220 SRIHIIMKNDKEMVGTLQGFDDFVNMLLDDV----TEYESTPEGRKITK 86
+++ I +N+K+++G ++ FD NM+L++V TE T +G+K K
Sbjct: 39 TQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVK 87
>AE014297-442|AAF54135.1| 119|Drosophila melanogaster CG1249-PA
protein.
Length = 119
Score = 31.1 bits (67), Expect = 0.69
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Frame = -2
Query: 220 SRIHIIMKNDKEMVGTLQGFDDFVNMLLDDV----TEYESTPEGRKITK 86
+++ I +N+K+++G ++ FD NM+L++V TE T +G+K K
Sbjct: 39 TQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVK 87
>AE013599-1887|AAM71005.2| 173|Drosophila melanogaster CG30074-PA
protein.
Length = 173
Score = 30.7 bits (66), Expect = 0.91
Identities = 11/26 (42%), Positives = 21/26 (80%)
Frame = -2
Query: 211 HIIMKNDKEMVGTLQGFDDFVNMLLD 134
H++M+N ++M+ T+ G D+FV++ LD
Sbjct: 78 HLVMENIEKMMKTILGSDEFVHVYLD 103
>AY071359-1|AAL48981.1| 124|Drosophila melanogaster RE39488p
protein.
Length = 124
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -2
Query: 214 IHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAMLVPG 35
+ I +KN ++ GT+ G D +N L V T + R L+ + + GNNI +
Sbjct: 15 VTIELKNGTQIHGTITGVDVAMNTHLKSV---RMTIKNRDHVHLETLSIRGNNIRYFILP 71
Query: 34 GEMPGES 14
+P E+
Sbjct: 72 DSLPLET 78
>AE014296-2169|AAF49893.1| 124|Drosophila melanogaster CG10753-PA
protein.
Length = 124
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -2
Query: 214 IHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTPEGRKITKLDQILLNGNNIAMLVPG 35
+ I +KN ++ GT+ G D +N L V T + R L+ + + GNNI +
Sbjct: 15 VTIELKNGTQIHGTITGVDVAMNTHLKSV---RMTIKNRDPVHLETLSIRGNNIRYFILP 71
Query: 34 GEMPGES 14
+P E+
Sbjct: 72 DSLPLET 78
>AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-PA
protein.
Length = 5303
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 278 TLRHFFSAYEDFVEFIYCNDNQL 346
TL + + Y+DFVE I C+ NQL
Sbjct: 3241 TLSRYSAYYQDFVEPIKCSVNQL 3263
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,964,816
Number of Sequences: 53049
Number of extensions: 356618
Number of successful extensions: 819
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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