Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc16d10
         (275 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   0.79 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   1.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   3.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   3.2  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    20   4.2  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    20   4.2  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    20   4.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    20   4.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    20   4.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   5.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   5.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   5.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    19   9.7  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 0.79
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 158 GYPAAKLRSYHWSV 117
           G  A+KL S+HW +
Sbjct: 233 GMAASKLNSFHWHI 246


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 93  WNWPHASFEDCQEGAS 46
           WN+P     +C++GAS
Sbjct: 756 WNYPVCWQSNCKKGAS 771



 Score = 20.2 bits (40), Expect = 4.2
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -2

Query: 217 YAEDVVDRHITFKNQNAPNVDILQQNYDPTTGQ*RLS 107
           YA   +D H      N    DI+Q  Y   TG  R++
Sbjct: 209 YAFATIDPHNFNMISNDDESDIIQGGYISVTGLKRVN 245


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 3.2
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = -3

Query: 150 CSKITIL-PLVSEG*AQEDYWNWPHASFE 67
           C  +TI  PLV  G    + WN P  + E
Sbjct: 138 CLAMTITGPLVIIGNIAMELWNMPRENIE 166


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 3.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 122 TSGRIVILLQDIHIGRILIFECDMTIYH 205
           TS   V+L+ D+H    +IF  DM   H
Sbjct: 162 TSMNFVLLIGDLHTSIYIIF-FDMFYQH 188


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 170 ILIFECDMTIYHIFCITY 223
           +L+F    T Y++ CI Y
Sbjct: 281 VLVFFVCWTPYYVMCIWY 298


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 170 ILIFECDMTIYHIFCITY 223
           +L+F    T Y++ CI Y
Sbjct: 281 VLVFFVCWTPYYVMCIWY 298


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 275 EFQTKGTSSFGKRRNKTHTLCRRCGR 198
           E + K  S++   R   + LCR C R
Sbjct: 257 ESKNKSESAWKNLREDYNRLCRLCKR 282


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 275 EFQTKGTSSFGKRRNKTHTLCRRCGR 198
           E + K  S++   R   + LCR C R
Sbjct: 257 ESKNKSESAWKNLREDYNRLCRLCKR 282


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 275 EFQTKGTSSFGKRRNKTHTLCRRCGR 198
           E + K  S++   R   + LCR C R
Sbjct: 257 ESKNKSESAWKNLREDYNRLCRLCKR 282


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 202 VDRHITFKNQNAPN 161
           +DR++ F +QN  N
Sbjct: 796 IDRNVVFSSQNNTN 809


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 164 GRILIFECDMTIYHIFCI 217
           G I  F+CD+     FC+
Sbjct: 370 GFISDFDCDINSIQYFCL 387


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -2

Query: 160 VDILQQNYD 134
           +D+LQ+NYD
Sbjct: 1   MDVLQKNYD 9


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 19.0 bits (37), Expect = 9.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 233 NKTHTLCRRCGRS 195
           N+   +CR CG+S
Sbjct: 246 NQKPNVCRICGKS 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,641
Number of Sequences: 336
Number of extensions: 1074
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4577651
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)