Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16d07
(749 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15805-1|CAA33804.1| 844|Drosophila melanogaster protein ( Dros... 344 7e-95
AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p pro... 344 7e-95
AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC... 344 7e-95
AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB... 344 7e-95
AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA... 344 7e-95
AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p pro... 178 6e-45
AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA... 178 6e-45
AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p pro... 88 1e-17
AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-P... 88 1e-17
AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA... 56 4e-08
AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-P... 46 4e-05
X70644-1|CAA49989.1| 847|Drosophila melanogaster histidine deca... 29 5.1
AE013599-1049|AAF58823.1| 847|Drosophila melanogaster CG3454-PA... 29 5.1
BT025849-1|ABF85749.1| 407|Drosophila melanogaster IP14878p pro... 29 6.8
AE014298-3188|AAN09569.1| 1751|Drosophila melanogaster CG14616-P... 29 6.8
AF533773-1|AAN04479.1| 539|Drosophila melanogaster Wnt4 protein... 29 8.9
>X15805-1|CAA33804.1| 844|Drosophila melanogaster protein (
Drosophila DMEF2 genefor the translation elongation
factor 2. ).
Length = 844
Score = 344 bits (846), Expect = 7e-95
Identities = 153/170 (90%), Positives = 162/170 (95%)
Frame = -3
Query: 747 VAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPR 568
VAGFQWA KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PR
Sbjct: 666 VAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPR 725
Query: 567 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 388
LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTAD
Sbjct: 726 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTAD 785
Query: 387 LRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 238
LRSNTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 786 LRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835
>AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p protein.
Length = 844
Score = 344 bits (846), Expect = 7e-95
Identities = 153/170 (90%), Positives = 162/170 (95%)
Frame = -3
Query: 747 VAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPR 568
VAGFQWA KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PR
Sbjct: 666 VAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPR 725
Query: 567 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 388
LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTAD
Sbjct: 726 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTAD 785
Query: 387 LRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 238
LRSNTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 786 LRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835
>AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC,
isoform C protein.
Length = 832
Score = 344 bits (846), Expect = 7e-95
Identities = 153/170 (90%), Positives = 162/170 (95%)
Frame = -3
Query: 747 VAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPR 568
VAGFQWA KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PR
Sbjct: 654 VAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPR 713
Query: 567 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 388
LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTAD
Sbjct: 714 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTAD 773
Query: 387 LRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 238
LRSNTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 774 LRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 823
>AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB,
isoform B protein.
Length = 832
Score = 344 bits (846), Expect = 7e-95
Identities = 153/170 (90%), Positives = 162/170 (95%)
Frame = -3
Query: 747 VAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPR 568
VAGFQWA KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PR
Sbjct: 654 VAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPR 713
Query: 567 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 388
LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTAD
Sbjct: 714 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTAD 773
Query: 387 LRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 238
LRSNTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 774 LRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 823
>AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA,
isoform A protein.
Length = 844
Score = 344 bits (846), Expect = 7e-95
Identities = 153/170 (90%), Positives = 162/170 (95%)
Frame = -3
Query: 747 VAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPR 568
VAGFQWA KEG++A+ENLRGVRFNIYDVTLH DAIHRGGGQIIPTTRRCLYA +TA+PR
Sbjct: 666 VAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPR 725
Query: 567 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 388
LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV GTPMF+VKAYLPVNESFGFTAD
Sbjct: 726 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTAD 785
Query: 387 LRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 238
LRSNTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ+TRKRKGLKEGLP
Sbjct: 786 LRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835
>AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p protein.
Length = 975
Score = 178 bits (434), Expect = 6e-45
Identities = 86/179 (48%), Positives = 115/179 (64%), Gaps = 12/179 (6%)
Frame = -3
Query: 747 VAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPR 568
V GFQW +EG + EE +R V+F I D + +A+HRGGGQIIPT RR Y+ L A PR
Sbjct: 770 VQGFQWGTREGPLCEEPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFLMATPR 829
Query: 567 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 388
LMEP E+Q P V +Y VL RRRGHV +++ V+G+P++ +KA++P +SFGF D
Sbjct: 830 LMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETD 889
Query: 387 LRSNTGGQAFPQCVFDHWQVLPGD---------PCEPQSKPY---NVVQETRKRKGLKE 247
LR++T GQAF VF HWQ++PGD P EPQ + + +TR+RKGL E
Sbjct: 890 LRTHTQGQAFCLSVFHHWQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTRRRKGLSE 948
>AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA
protein.
Length = 975
Score = 178 bits (434), Expect = 6e-45
Identities = 86/179 (48%), Positives = 115/179 (64%), Gaps = 12/179 (6%)
Frame = -3
Query: 747 VAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPR 568
V GFQW +EG + EE +R V+F I D + +A+HRGGGQIIPT RR Y+ L A PR
Sbjct: 770 VQGFQWGTREGPLCEEPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFLMATPR 829
Query: 567 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 388
LMEP E+Q P V +Y VL RRRGHV +++ V+G+P++ +KA++P +SFGF D
Sbjct: 830 LMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETD 889
Query: 387 LRSNTGGQAFPQCVFDHWQVLPGD---------PCEPQSKPY---NVVQETRKRKGLKE 247
LR++T GQAF VF HWQ++PGD P EPQ + + +TR+RKGL E
Sbjct: 890 LRTHTQGQAFCLSVFHHWQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTRRRKGLSE 948
>AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p protein.
Length = 949
Score = 88.2 bits (209), Expect = 1e-17
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Frame = -3
Query: 747 VAGFQWAXKEGVMAEENLRGVRFNIYDVTLHT---DAIHRG--GGQIIPTTRRCLYACLL 583
V GFQ G + EE ++GV F + + ++ + D RG GQ++ +
Sbjct: 744 VNGFQITSVAGPLCEEPMQGVCFAVLEWSIQSEGEDLNSRGPFSGQVLTAAKEVCRQAFQ 803
Query: 582 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 403
RL+ P+Y C I +G +Y V+ RR G + G+ F V LPV ESF
Sbjct: 804 NQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQGSGNFAVTCLLPVIESF 863
Query: 402 GFTADLRSNTGGQAFPQCVFDHWQVLPGDP 313
F ++R T G A PQ +F HW+V+ DP
Sbjct: 864 NFAQEMRKQTSGLACPQLMFSHWEVIDIDP 893
>AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-PB
protein.
Length = 1033
Score = 88.2 bits (209), Expect = 1e-17
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Frame = -3
Query: 747 VAGFQWAXKEGVMAEENLRGVRFNIYDVTLHT---DAIHRG--GGQIIPTTRRCLYACLL 583
V GFQ G + EE ++GV F + + ++ + D RG GQ++ +
Sbjct: 828 VNGFQITSVAGPLCEEPMQGVCFAVLEWSIQSEGEDLNSRGPFSGQVLTAAKEVCRQAFQ 887
Query: 582 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 403
RL+ P+Y C I +G +Y V+ RR G + G+ F V LPV ESF
Sbjct: 888 NQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQGSGNFAVTCLLPVIESF 947
Query: 402 GFTADLRSNTGGQAFPQCVFDHWQVLPGDP 313
F ++R T G A PQ +F HW+V+ DP
Sbjct: 948 NFAQEMRKQTSGLACPQLMFSHWEVIDIDP 977
>AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA
protein.
Length = 745
Score = 56.4 bits (130), Expect = 4e-08
Identities = 38/165 (23%), Positives = 76/165 (46%)
Frame = -3
Query: 741 GFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLM 562
G++ ++G+++ L G+RF + D H + + + +++
Sbjct: 583 GYREMAEKGMLSGHKLSGIRFRLQDGGHHI--VDSSELAFMLAAHGAIKEVFQNGSWQIL 640
Query: 561 EPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLR 382
EP+ L E+ PE G + G L++R G + G F V A +P+N+ FG+ +LR
Sbjct: 641 EPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEG--WFTVYAEVPLNDMFGYAGELR 698
Query: 381 SNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKE 247
S+T G+ + + PC P + +V++ ++ +GL +
Sbjct: 699 SSTQGKGEFTMEYSRY-----SPCLPDVQD-QIVRQYQESQGLAQ 737
>AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-PA
protein.
Length = 692
Score = 46.4 bits (105), Expect = 4e-05
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = -3
Query: 666 VTLHTDAIHRGGGQ--IIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLN 493
+ LH I RG ++ T +C+ L T+ RL+EP+ +I P + GI L+
Sbjct: 562 IRLHNATIGRGTADSFVMATAAQCVQKLLSTSGTRLLEPIMALQIVAPSERISGIMADLS 621
Query: 492 RRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQA 361
RRR + + G ++ P+ E G+++ LR+ + G A
Sbjct: 622 RRRA-LINDVLPKGERNKMILVNAPLAELSGYSSALRTISSGTA 664
>X70644-1|CAA49989.1| 847|Drosophila melanogaster histidine
decarboxylase protein.
Length = 847
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Frame = -3
Query: 741 GFQWAXKEGVMAEE----NLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQ 574
GF WA E N G + D LH + +GGG + T CLL +
Sbjct: 102 GFTWASSPACTELEIIVMNWLGKMIGLPDAFLHLSSQSQGGGVLQTTASEATLVCLLAGR 161
Query: 573 PRLME 559
R ++
Sbjct: 162 TRAIQ 166
>AE013599-1049|AAF58823.1| 847|Drosophila melanogaster CG3454-PA
protein.
Length = 847
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Frame = -3
Query: 741 GFQWAXKEGVMAEE----NLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQ 574
GF WA E N G + D LH + +GGG + T CLL +
Sbjct: 102 GFTWASSPACTELEIIVMNWLGKMIGLPDAFLHLSSQSQGGGVLQTTASEATLVCLLAGR 161
Query: 573 PRLME 559
R ++
Sbjct: 162 TRAIQ 166
>BT025849-1|ABF85749.1| 407|Drosophila melanogaster IP14878p
protein.
Length = 407
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 160 LHACLFSTTHVPHHIKADAQVRQQLNMSHST 68
LHA + PHH++ DA++R+ N++ ST
Sbjct: 212 LHASINLPAAGPHHLRQDARLRKFENLTQST 242
>AE014298-3188|AAN09569.1| 1751|Drosophila melanogaster CG14616-PC,
isoform C protein.
Length = 1751
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 160 LHACLFSTTHVPHHIKADAQVRQQLNMSHST 68
LHA + PHH++ DA++R+ N++ ST
Sbjct: 1556 LHASINLPAAGPHHLRQDARLRKFENLTQST 1586
>AF533773-1|AAN04479.1| 539|Drosophila melanogaster Wnt4 protein
protein.
Length = 539
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 361 GLSAGVGTQIGSKTERLIDR*VGLHNEHRCTCH 459
G +AG+G +IGS T + D GL+NEH + H
Sbjct: 193 GGAAGMGLRIGSNTNNM-DMQQGLYNEHFISEH 224
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,687,700
Number of Sequences: 53049
Number of extensions: 803941
Number of successful extensions: 2060
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2059
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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