Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16d06
(701 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P24728 Cluster: Polyhedral envelope protein; n=6; Nucle... 132 8e-30
UniRef50_P17498 Cluster: Polyhedral envelope protein; n=7; Nucle... 127 3e-28
UniRef50_P24730 Cluster: Uncharacterized 25.1 kDa protein in PP3... 125 9e-28
UniRef50_Q0N3Y8 Cluster: CALYX/PEP; n=6; Nucleopolyhedrovirus|Re... 62 1e-08
UniRef50_A0EZ11 Cluster: Calyx/pep; n=2; Nucleopolyhedrovirus|Re... 57 5e-07
UniRef50_Q91BA2 Cluster: Calyx protein; n=2; Nucleopolyhedroviru... 56 1e-06
UniRef50_Q77LV8 Cluster: Calyx/pep; n=4; Nucleopolyhedrovirus|Re... 49 1e-04
UniRef50_P36865 Cluster: Polyhedral envelope protein; n=2; Lyman... 49 1e-04
UniRef50_Q287M3 Cluster: CALYX/PEP; n=3; Nucleopolyhedrovirus|Re... 45 0.002
UniRef50_Q0FEW6 Cluster: Flagellar motor protein; n=1; alpha pro... 41 0.034
UniRef50_A5ICJ8 Cluster: Tpr; n=5; Legionella pneumophila|Rep: T... 36 0.73
UniRef50_Q6JKA7 Cluster: Putative uncharacterized protein; n=2; ... 35 1.7
UniRef50_Q2SGV4 Cluster: Methyl-accepting chemotaxis protein; n=... 35 1.7
UniRef50_Q22RF4 Cluster: Viral A-type inclusion protein repeat c... 35 1.7
UniRef50_Q1RQ02 Cluster: Zinc finger protein; n=1; Ciona intesti... 35 1.7
UniRef50_A2EN31 Cluster: Viral A-type inclusion protein, putativ... 35 1.7
UniRef50_A0CPG4 Cluster: Chromosome undetermined scaffold_23, wh... 35 2.2
UniRef50_A5DR48 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_Q9CCY6 Cluster: Possible membrane transport protein; n=... 33 5.1
UniRef50_A7FTJ8 Cluster: Helicase, UvrD/REP/exonuclease family p... 33 5.1
UniRef50_A0YKJ9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_A0LA72 Cluster: Methyl-accepting chemotaxis sensory tra... 33 5.1
UniRef50_A7EAA5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_UPI00004D0E8C Cluster: Protein FAM81B.; n=3; Xenopus tr... 33 6.8
UniRef50_Q6YQH0 Cluster: ATP-dependent Zn protease; n=19; Candid... 33 6.8
UniRef50_Q15TL3 Cluster: MscS Mechanosensitive ion channel precu... 33 6.8
UniRef50_Q5CW96 Cluster: Signal peptide plus His and thr repeats... 33 6.8
UniRef50_Q54G05 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_Q22T20 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_Q87QA5 Cluster: Sensor protein; n=33; Vibrionales|Rep: ... 33 9.0
UniRef50_Q39XM8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_Q1EY93 Cluster: YidE/YbjL duplication; n=3; Clostridium... 33 9.0
UniRef50_A4G2H0 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_Q23K90 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_Q2GUU6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_A4RPE6 Cluster: Predicted protein; n=1; Magnaporthe gri... 33 9.0
>UniRef50_P24728 Cluster: Polyhedral envelope protein; n=6;
Nucleopolyhedrovirus|Rep: Polyhedral envelope protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 252
Score = 132 bits (319), Expect = 8e-30
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = -1
Query: 701 TNQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQ 522
TNQFLELSN+MTGVRNQNVQLLAALETAKDVILTRLNTLL+EITDSLPDLT MLDKLAEQ
Sbjct: 178 TNQFLELSNMMTGVRNQNVQLLAALETAKDVILTRLNTLLAEITDSLPDLTSMLDKLAEQ 237
Query: 521 LLEAINTMQQT 489
LL+AINT+QQT
Sbjct: 238 LLDAINTVQQT 248
>UniRef50_P17498 Cluster: Polyhedral envelope protein; n=7;
Nucleopolyhedrovirus|Rep: Polyhedral envelope protein -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 297
Score = 127 bits (306), Expect = 3e-28
Identities = 74/147 (50%), Positives = 94/147 (63%)
Frame = -1
Query: 701 TNQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQ 522
+NQFLELSN + VR QN Q+LAALET KD ILTRLN L+ +I +LPD + L +LA++
Sbjct: 156 SNQFLELSNTLNTVRAQNAQILAALETTKDAILTRLNALVDDIKAALPDQSAQLQELADK 215
Query: 521 LLEAINTMQQTQRNELNNTNSILTNLASSXXXXXXXXXXXXXXIENLAXXXXXXXXXXXG 342
LL+AIN++ QT R E+NNTNSILTNLASS IE + G
Sbjct: 216 LLDAINSVAQTLRGEMNNTNSILTNLASSITNINSTLNNLLAAIEGIG--------GDGG 267
Query: 341 NFNEADRQKLDLVHTLVNDIKNILTGT 261
+ADRQ L+ V +LV +I+NIL GT
Sbjct: 268 GLGDADRQALNEVLSLVTEIRNILMGT 294
>UniRef50_P24730 Cluster: Uncharacterized 25.1 kDa protein in
PP34-EXO intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 25.1 kDa
protein in PP34-EXO intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 219
Score = 125 bits (302), Expect = 9e-28
Identities = 61/64 (95%), Positives = 61/64 (95%)
Frame = -3
Query: 243 MSDKTPTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTLRTTADVSSLQNHGES 64
MSDKTPTKK G HAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTLRTTADVSSLQN GES
Sbjct: 1 MSDKTPTKKGGSHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTLRTTADVSSLQNPGES 60
Query: 63 AVFQ 52
AVFQ
Sbjct: 61 AVFQ 64
>UniRef50_Q0N3Y8 Cluster: CALYX/PEP; n=6; Nucleopolyhedrovirus|Rep:
CALYX/PEP - Clanis bilineata nucleopolyhedrosis virus
Length = 338
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/89 (38%), Positives = 48/89 (53%)
Frame = -1
Query: 701 TNQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQ 522
+NQ LE++N + +R QNV L D + ++ T+ SEI L D+ D+L
Sbjct: 196 SNQHLEITNQLNAIRLQNVNTSNQLTALADALEKQIATIASEIERLLGDVDRRFDQLLAA 255
Query: 521 LLEAINTMQQTQRNELNNTNSILTNLASS 435
L A+ +Q RNEL N N+IL NL SS
Sbjct: 256 LTAALAQLQDAVRNELTNVNAILNNLTSS 284
>UniRef50_A0EZ11 Cluster: Calyx/pep; n=2; Nucleopolyhedrovirus|Rep:
Calyx/pep - Ecotropis obliqua NPV
Length = 330
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/89 (31%), Positives = 50/89 (56%)
Frame = -1
Query: 701 TNQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQ 522
+NQ LE++N + ++ QN+ + L D++ +L + +++ L + L+ +
Sbjct: 184 SNQHLEINNALNTIKLQNITITGQLTQLIDLLENQLVNIAADLRSLLDNFDTKLNNFLDA 243
Query: 521 LLEAINTMQQTQRNELNNTNSILTNLASS 435
L +A+ +Q + RNEL N NSIL NL SS
Sbjct: 244 LNKALAQLQDSVRNELTNINSILNNLTSS 272
>UniRef50_Q91BA2 Cluster: Calyx protein; n=2;
Nucleopolyhedrovirus|Rep: Calyx protein - Spodoptera
litura multicapsid nucleopolyhedrovirus (SpltMNPV)
Length = 344
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/89 (30%), Positives = 48/89 (53%)
Frame = -1
Query: 701 TNQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQ 522
TNQF+EL+N + +R QN + A + ++ I T N + + + L L
Sbjct: 209 TNQFVELNNAVAAIRAQNSSIAAQVSAIQEAIETGFNNVEQSLESLIAGLETRLSSALNA 268
Query: 521 LLEAINTMQQTQRNELNNTNSILTNLASS 435
L + + +Q+T R E+ + NS+++NLA+S
Sbjct: 269 LNDILVRLQETVRAEITSLNSVISNLAAS 297
>UniRef50_Q77LV8 Cluster: Calyx/pep; n=4; Nucleopolyhedrovirus|Rep:
Calyx/pep - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 340
Score = 49.2 bits (112), Expect = 1e-04
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Frame = -1
Query: 701 TNQFLELSNVMTGVRNQN-------VQLLAALETAKDVILTRLNTLLSEITDSLPDLTLM 543
TN F E++N ++ + QN +LL +++ ++L RLN L SE+
Sbjct: 202 TNNFAEINNSLSTISLQNSTLTGQVARLLESVDRQLPLLLDRLNLLSSEVRQ-------Q 254
Query: 542 LDKLAEQLLEAINTMQQTQRNELNNTNSILTNLASS 435
L++ + QL E++N Q RNEL NS L NL SS
Sbjct: 255 LNQFSGQLAESLNRFQDVLRNELTGINSALNNLTSS 290
>UniRef50_P36865 Cluster: Polyhedral envelope protein; n=2;
Lymantria dispar MNPV|Rep: Polyhedral envelope protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 312
Score = 48.8 bits (111), Expect = 1e-04
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = -1
Query: 701 TNQFLELSNVMTGVRNQNVQLLAAL-ETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAE 525
+N ELSN++ ++ QNV ++ L + D +L+ L+ LS + + DL
Sbjct: 168 SNHHFELSNILNSIKLQNVNIINQLSQIFDDGVLSGLDEKLSRL---IADLDGHFADFGS 224
Query: 524 QLLEAINTMQQTQRNELNNTNSILTNLASS 435
L A+ +Q + RN+L N NSIL NL SS
Sbjct: 225 ALDAALAQLQDSLRNDLTNINSILANLTSS 254
>UniRef50_Q287M3 Cluster: CALYX/PEP; n=3; Nucleopolyhedrovirus|Rep:
CALYX/PEP - Agrotis segetum nuclear polyhedrosis virus
(AsNPV)
Length = 341
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/88 (31%), Positives = 44/88 (50%)
Frame = -1
Query: 698 NQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQL 519
NQ LELSNV+ +R Q+V A + + + L + T L ++ L + L
Sbjct: 204 NQHLELSNVLNAIRLQSVTTAAQVGQILETV-QGLGEFDGDFTKLLAEIDARLAAQSSAL 262
Query: 518 LEAINTMQQTQRNELNNTNSILTNLASS 435
A+N + + RN+L+ +IL NL SS
Sbjct: 263 QAALNQLAEQVRNDLSGITAILNNLTSS 290
>UniRef50_Q0FEW6 Cluster: Flagellar motor protein; n=1; alpha
proteobacterium HTCC2255|Rep: Flagellar motor protein -
alpha proteobacterium HTCC2255
Length = 638
Score = 40.7 bits (91), Expect = 0.034
Identities = 29/93 (31%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Frame = -1
Query: 701 TNQFLELSNVMTGVRNQNVQL--LAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLA 528
T+Q LEL+N+ + + Q+ +L L++L + K+ T LN+L +EI L + +++
Sbjct: 48 TDQDLELNNLSSQIEQQDSELNNLSSLISKKE---TELNSLSTEILSKEERLNKLTSEIS 104
Query: 527 EQ--LLEAINTMQQTQRNELNNTNSILTNLASS 435
++ +L++++T Q ELN+ + LT+LAS+
Sbjct: 105 QKDLMLDSLSTQVTEQDLELNDLSLQLTDLASA 137
>UniRef50_A5ICJ8 Cluster: Tpr; n=5; Legionella pneumophila|Rep: Tpr
- Legionella pneumophila (strain Corby)
Length = 546
Score = 36.3 bits (80), Expect = 0.73
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = -1
Query: 605 LTRLNTLLSEITDSLPDLTLMLDKLAEQ---LLEAINTMQQTQRNELNNTNSILTNLA 441
LTRLNT LS + + PDLT ++L EQ LLE+ N+ +T RN+L ++T L+
Sbjct: 319 LTRLNTQLSSLQLANPDLTRRNERLEEQNRELLESYNSHIKT-RNKLFFPTLVITGLS 375
>UniRef50_Q6JKA7 Cluster: Putative uncharacterized protein; n=2;
Neodiprion sertifer NPV|Rep: Putative uncharacterized
protein - Neodiprion sertifer NPV
Length = 386
Score = 35.1 bits (77), Expect = 1.7
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = -1
Query: 668 TGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQT 489
T + + + +++ LE D I + LN L SE++D++ +T + + + A+ + +
Sbjct: 273 TAIESISENIISQLEVNNDAITSELNKLSSEVSDNIDTITSDVTTAFDNIQTALQKSETS 332
Query: 488 QRNELNNTNSILTNL 444
+ +N+T ++ L
Sbjct: 333 TVSGINDTGIVIEKL 347
>UniRef50_Q2SGV4 Cluster: Methyl-accepting chemotaxis protein; n=1;
Hahella chejuensis KCTC 2396|Rep: Methyl-accepting
chemotaxis protein - Hahella chejuensis (strain KCTC
2396)
Length = 546
Score = 35.1 bits (77), Expect = 1.7
Identities = 17/68 (25%), Positives = 39/68 (57%)
Frame = -1
Query: 638 LAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNS 459
LAAL + + ++ L++ +T S+ LTL +D+L+ +++++ Q Q+ E + S
Sbjct: 249 LAALSVQFNTFVDKIRNLVTNVTSSIGLLTLSVDELSNAAMKSVDN-AQNQQKETDQVAS 307
Query: 458 ILTNLASS 435
+ +++S
Sbjct: 308 AMNQMSAS 315
>UniRef50_Q22RF4 Cluster: Viral A-type inclusion protein repeat
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Viral A-type inclusion protein repeat
containing protein - Tetrahymena thermophila SB210
Length = 3640
Score = 35.1 bits (77), Expect = 1.7
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = -1
Query: 698 NQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQL 519
+Q L +T +NVQ+ +++ KD + L +TD + +L +D L QL
Sbjct: 1906 SQIQRLKEDLTQEEQKNVQI-QSIQIEKDQKIQVLEEQAESLTDEITNLQGQIDILNRQL 1964
Query: 518 LEAINTMQQTQRNELNNTN 462
+ NT+ + Q+N+ N
Sbjct: 1965 NSSYNTLSEIQKNKQTFVN 1983
>UniRef50_Q1RQ02 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 868
Score = 35.1 bits (77), Expect = 1.7
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = -1
Query: 626 ETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAIN---TMQQTQRNELNNTNSI 456
+ A+ + T+LN L E DL DK+++ L ++N + + NE+ +TNS+
Sbjct: 99 DQAQRSVRTQLNNFLREEVKPTKDLKKTFDKVSDDYLSSLNKHAAANKLKPNEVEDTNSV 158
Query: 455 LTN 447
LT+
Sbjct: 159 LTS 161
>UniRef50_A2EN31 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion
protein, putative - Trichomonas vaginalis G3
Length = 5296
Score = 35.1 bits (77), Expect = 1.7
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = -1
Query: 695 QFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLL 516
Q +L + +T + ++Q+ AL +KD +++LN + +I D L+KL +L
Sbjct: 2029 QISQLQDKLTEKKKNSLQMKQAL-ASKDAEISKLNEEIEQIKSEKEDQDKELEKLNNELT 2087
Query: 515 EAINTMQQTQR---NELNNTN 462
EA+ ++ ++ E NN N
Sbjct: 2088 EALEKLENGKKKSSQEQNNEN 2108
>UniRef50_A0CPG4 Cluster: Chromosome undetermined scaffold_23, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_23,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 642
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = -1
Query: 656 NQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNE 477
NQ +Q++ +L + N + E+T L L L ++ A+QLL+ +N+ + T++N
Sbjct: 291 NQRLQIIEQRNKEIQDLLNKSNKMAKELTKDLKRLFLSVNDDADQLLDNLNSPRPTKQNV 350
Query: 476 L 474
L
Sbjct: 351 L 351
>UniRef50_A5DR48 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 368
Score = 33.9 bits (74), Expect = 3.9
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = -1
Query: 641 LLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKL--AEQLLEAINTMQQTQRNELNN 468
LL+ +++ +DV++ + L + I L D T + KL A + +E +T+ + Q+ EL N
Sbjct: 145 LLSMVDSVEDVLIQKEQNLFNWIEKVLQDNTALKSKLAAATEKMETFSTISKNQQEELEN 204
Query: 467 TN 462
++
Sbjct: 205 SH 206
>UniRef50_Q9CCY6 Cluster: Possible membrane transport protein; n=5;
Mycobacterium|Rep: Possible membrane transport protein -
Mycobacterium leprae
Length = 618
Score = 33.5 bits (73), Expect = 5.1
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 119 SAAIAFLYCCNFSDFFGGFVTPRSRNVMAWPPLFFVGVLSDMLILLSTFP 268
SA + + CN G +V +NV AW ++ + VLS ML +++ FP
Sbjct: 448 SATVFLVLLCNDRPVLGPWVNTARQNVFAWMIVWSLVVLSLMLTVVTLFP 497
>UniRef50_A7FTJ8 Cluster: Helicase, UvrD/REP/exonuclease family
protein; n=4; Clostridium botulinum|Rep: Helicase,
UvrD/REP/exonuclease family protein - Clostridium
botulinum (strain ATCC 19397 / Type A)
Length = 855
Score = 33.5 bits (73), Expect = 5.1
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 562 NESVISESNVFNLVKITSLAVSNAARSCTF*LRTPVITLDNSK 690
N+ + S N+ L+KITSL+ S R T R P+IT+ +K
Sbjct: 737 NKEISSRDNLIELLKITSLSNSELDRMLTKYPRVPIITVHQAK 779
>UniRef50_A0YKJ9 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 1015
Score = 33.5 bits (73), Expect = 5.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 228 PTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTLRTTA 97
P KSG ++ E V +PP S K Q++ + I + +T++TT+
Sbjct: 729 PPTKSGLDVISTEETAVIEPPSTSVKHQEFDQKIPSAETVQTTS 772
>UniRef50_A0LA72 Cluster: Methyl-accepting chemotaxis sensory
transducer; n=1; Magnetococcus sp. MC-1|Rep:
Methyl-accepting chemotaxis sensory transducer -
Magnetococcus sp. (strain MC-1)
Length = 827
Score = 33.5 bits (73), Expect = 5.1
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = -1
Query: 662 VRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAE------QLLEAINT 501
+ +QNV +AA + + ++NT L + D + + + +LA+ L E N
Sbjct: 395 IASQNVHTMAAAAEQMNANIEQVNTSLRRVDDEVSTVVHAISELAQNQNQIRSLCEQANA 454
Query: 500 MQQTQRNELNNTNSILTNLASS 435
T N+ NT + + +L S
Sbjct: 455 ASTTAANQAQNTRNAMNDLTES 476
>UniRef50_A7EAA5 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1669
Score = 33.5 bits (73), Expect = 5.1
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -1
Query: 698 NQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQL 519
N+ ++LS + +R+ N L A L + KD +L + E+T L D+ L L AEQL
Sbjct: 1031 NENIKLSEQLNVLRDSNASLKANLNS-KDAVLEHHIARMYELTRELADVRLQLINKAEQL 1089
>UniRef50_UPI00004D0E8C Cluster: Protein FAM81B.; n=3; Xenopus
tropicalis|Rep: Protein FAM81B. - Xenopus tropicalis
Length = 368
Score = 33.1 bits (72), Expect = 6.8
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -1
Query: 638 LAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 471
L L+ A+D I R+N + +EI D L ++ + + E++N++QQ Q ++N
Sbjct: 290 LNKLKHAEDKINARMNAIETEIWDELENMKSEYRAGFQSIQESLNSLQQIQETKVN 345
>UniRef50_Q6YQH0 Cluster: ATP-dependent Zn protease; n=19;
Candidatus Phytoplasma asteris|Rep: ATP-dependent Zn
protease - Onion yellows phytoplasma
Length = 786
Score = 33.1 bits (72), Expect = 6.8
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = -1
Query: 644 QLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNN 468
Q+ ++T D+I T++ TL +E+T++ P L + +Q L + QQTQ+ +NN
Sbjct: 75 QINENVKTLTDII-TKIKTLQTELTNN-PQLNPTIKTQKQQQLTELKNQQQTQQTLVNN 131
>UniRef50_Q15TL3 Cluster: MscS Mechanosensitive ion channel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
MscS Mechanosensitive ion channel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1110
Score = 33.1 bits (72), Expect = 6.8
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = -1
Query: 689 LELSNVMTGVRNQ-----NVQLLAALETAKDVILTRLNTL--LSEITDSLPDLTLMLDKL 531
LEL + +T ++NQ N +LA LE +++ +TL +++ ++L L +
Sbjct: 229 LELLDALTRLQNQLDEKENASMLAQLEATTASLISAPSTLQDIAKQNEALAKKATSLTEQ 288
Query: 530 AEQLLEAINTMQQTQRNELNNTNSILTNL 444
+ + +N +Q TQ NELNN S L L
Sbjct: 289 QDATSQKLNEIQ-TQINELNNKFSSLNRL 316
>UniRef50_Q5CW96 Cluster: Signal peptide plus His and thr repeats,
signal peptide plus transmembrane domain or GPI anchor,
predicted mucin; n=2; Cryptosporidium|Rep: Signal
peptide plus His and thr repeats, signal peptide plus
transmembrane domain or GPI anchor, predicted mucin -
Cryptosporidium parvum Iowa II
Length = 520
Score = 33.1 bits (72), Expect = 6.8
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = -1
Query: 701 TNQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTL--LSEITDS-LPDLTLMLDKL 531
TN E+ + + N N + L K ++ LN++ + +T S LP + +LD++
Sbjct: 274 TNMTKEIKSSLVDTFN-NTMSIDILNNTKSIVNQTLNSIEQIKNVTTSNLPLNSTILDQI 332
Query: 530 AEQLLEAINTMQQTQRNELNNTNSI 456
E A+N T N LNN ++
Sbjct: 333 KETRSVAVNQTTTTIENNLNNLTNV 357
>UniRef50_Q54G05 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1492
Score = 33.1 bits (72), Expect = 6.8
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Frame = -1
Query: 698 NQFLE-----LSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDK 534
NQ LE L + ++++N L + ++T K R+N EI D +L M +
Sbjct: 247 NQLLEDNIKRLQESLNEIKDENNDLQSLIDTQKQQFEKRINQYQLEIQDKENELNEMNQQ 306
Query: 533 LAEQLLEAINTMQQTQRNELNNTNSILTNL 444
Q+ ++QQ+Q + N+ N T L
Sbjct: 307 SLSQVKSFQQSLQQSQLDLENDKNQFSTKL 336
>UniRef50_Q22T20 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 807
Score = 33.1 bits (72), Expect = 6.8
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = -1
Query: 614 DVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEA-INTMQQTQRNELNNTNS 459
D +++L+T +S + D D+ +++L + LEA ++T+Q T + NN N+
Sbjct: 339 DESISKLDTTISNVQDFPVDIQKRVEELVQAQLEAKLSTLQLTNQQNSNNNNN 391
>UniRef50_Q87QA5 Cluster: Sensor protein; n=33; Vibrionales|Rep:
Sensor protein - Vibrio parahaemolyticus
Length = 646
Score = 32.7 bits (71), Expect = 9.0
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = -1
Query: 662 VRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQR 483
V+ + VQLL +TAK L + + E+ +LPD T+ K+ LE+ + +
Sbjct: 382 VQIKGVQLLTRAQTAKPASTAELRSRVKELNSTLPDRTI-AKKVVNLGLESDSELVSQLA 440
Query: 482 NELNNTNSILTNL 444
+ +N +S L L
Sbjct: 441 KKKDNASSTLETL 453
>UniRef50_Q39XM8 Cluster: Putative uncharacterized protein; n=1;
Geobacter metallireducens GS-15|Rep: Putative
uncharacterized protein - Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210)
Length = 353
Score = 32.7 bits (71), Expect = 9.0
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -1
Query: 683 LSNVMTGVRNQNVQLLAALETA-KDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAI 507
L N + G R + A LE +D+I+ RLN L E D++ DL D++A L E +
Sbjct: 142 LVNALVGTRG--LYTAAELEEFFRDIIVARLNDYLGETIDTVLDLPARYDEMASALKERL 199
>UniRef50_Q1EY93 Cluster: YidE/YbjL duplication; n=3;
Clostridium|Rep: YidE/YbjL duplication - Clostridium
oremlandii OhILAs
Length = 462
Score = 32.7 bits (71), Expect = 9.0
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -1
Query: 686 ELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAI 507
E+S V TG + L AA+ETA+D R+N + +LD E E++
Sbjct: 146 EVSGVYTGALTSSPGLAAAIETARDHATVRVNGFGDAGSQEREKFMKILDPSGEVYQESL 205
Query: 506 NTMQQTQRNE-LNNTNS 459
+++ Q ++ + N S
Sbjct: 206 DSLTNEQESQFIKNAES 222
>UniRef50_A4G2H0 Cluster: Putative uncharacterized protein; n=1;
Herminiimonas arsenicoxydans|Rep: Putative
uncharacterized protein - Herminiimonas arsenicoxydans
Length = 280
Score = 32.7 bits (71), Expect = 9.0
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = -1
Query: 605 LTRLNTLLSEITDSLPDL-----TLMLDKLAEQLLEAINTMQQTQRNELNNTNSILTNLA 441
LTR N L++ D LP L ++M D + E LL +NT+ + ++ N+TNS + LA
Sbjct: 102 LTRANIALTDQMDGLPKLNASNASVMYD-VNEDLLNKLNTLAFSLESDTNDTNSRVVALA 160
>UniRef50_Q23K90 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1624
Score = 32.7 bits (71), Expect = 9.0
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -3
Query: 288 RYQKYTHGNVDNKISMSDKTPTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTL 109
R KY+ N+D+ I + KTP+K G R ++ EK+ Q KK + Q L
Sbjct: 767 RVSKYSRQNLDSSIISARKTPSKSQGPRKSPTPTR-QAYDQQEEEKITQLKKQLQESQDL 825
>UniRef50_Q2GUU6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 2533
Score = 32.7 bits (71), Expect = 9.0
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = -1
Query: 689 LELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLE 513
LE + TG+ ++L L+T DV+L++ + +SE+ +L L+ D+ A + E
Sbjct: 1636 LEFEDAKTGLIGVKIELDEKLQTNADVLLSKFDERMSELMTKYEELQLIQDERATKTEE 1694
>UniRef50_A4RPE6 Cluster: Predicted protein; n=1; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 55
Score = 32.7 bits (71), Expect = 9.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 522 IVGSHQHDAANAAQRVEQHQLYFDQFSVEH 433
IVG+H H A+ QRV+QH+ Q ++H
Sbjct: 15 IVGAHHHGASGLGQRVQQHEAVPGQVRLKH 44
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,089,430
Number of Sequences: 1657284
Number of extensions: 10959539
Number of successful extensions: 37939
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37877
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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