Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16d06
(701 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1288|AAN12044.1| 923|Drosophila melanogaster CG14837-P... 31 1.5
BT010301-1|AAQ23619.1| 887|Drosophila melanogaster LD09626p pro... 30 2.6
AY058244-1|AAL13473.1| 796|Drosophila melanogaster GH01087p pro... 30 2.6
AE014297-1919|AAF55113.1| 796|Drosophila melanogaster CG7262-PA... 30 2.6
AE014296-771|AAF47842.3| 887|Drosophila melanogaster CG14998-PA... 30 2.6
AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD... 30 2.6
AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE... 30 2.6
AE014296-768|AAF47841.3| 851|Drosophila melanogaster CG14998-PB... 30 2.6
AE014296-767|AAN11586.2| 833|Drosophila melanogaster CG14998-PC... 30 2.6
AE013599-2370|AAF57935.1| 394|Drosophila melanogaster CG6472-PA... 29 6.1
BT001476-1|AAN71231.1| 607|Drosophila melanogaster LD19244p pro... 29 8.1
AF145609-1|AAD38584.1| 974|Drosophila melanogaster BcDNA.GH0283... 29 8.1
AE014298-2568|AAO41693.1| 975|Drosophila melanogaster CG8611-PB... 29 8.1
AE014298-2567|AAF48727.2| 974|Drosophila melanogaster CG8611-PA... 29 8.1
AE014296-2785|AAN11739.2| 657|Drosophila melanogaster CG3849-PB... 29 8.1
AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA... 29 8.1
>AE014296-1288|AAN12044.1| 923|Drosophila melanogaster CG14837-PB,
isoform B protein.
Length = 923
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/88 (21%), Positives = 48/88 (54%)
Frame = -1
Query: 698 NQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQL 519
N+F S+ + + L L+TAK+ + T + + +E+ ++ + T LD+ ++
Sbjct: 183 NKFGRTSHYYNNKPHASETLTTTLDTAKETVGTAVAGITTELGNAFKEGTQALDEAKHKV 242
Query: 518 LEAINTMQQTQRNELNNTNSILTNLASS 435
+E ++ +++ Q +E + T+ + ++SS
Sbjct: 243 MEGLH-LEEPQVSE-SKTDPVEATMSSS 268
>BT010301-1|AAQ23619.1| 887|Drosophila melanogaster LD09626p protein.
Length = 887
Score = 30.3 bits (65), Expect = 2.6
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 650 NVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 471
N +LL E+ V E ++ D+ L+ D +A + I+ ++Q LN
Sbjct: 799 NGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVAPVATQLIDLSIESQDLHLN 858
Query: 470 NTNSILTNLASS 435
N NS+LT+ A++
Sbjct: 859 NNNSLLTSTAAT 870
>AY058244-1|AAL13473.1| 796|Drosophila melanogaster GH01087p
protein.
Length = 796
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/65 (24%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Frame = -1
Query: 614 DVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAI-----NTMQQTQRNELNNTNSILT 450
DV+L + L E+ LPD+ + ++A++ + + ++++QTQ +L L+
Sbjct: 711 DVVLGNVKQLSGEVIKVLPDVIVAAMEIAQKQYKQLKAGSGSSLEQTQMQQLRQRAKALS 770
Query: 449 NLASS 435
N+A++
Sbjct: 771 NMAAT 775
>AE014297-1919|AAF55113.1| 796|Drosophila melanogaster CG7262-PA
protein.
Length = 796
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/65 (24%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Frame = -1
Query: 614 DVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAI-----NTMQQTQRNELNNTNSILT 450
DV+L + L E+ LPD+ + ++A++ + + ++++QTQ +L L+
Sbjct: 711 DVVLGNVKQLSGEVIKVLPDVIVAAMEIAQKQYKQLKAGSGSSLEQTQMQQLRQRAKALS 770
Query: 449 NLASS 435
N+A++
Sbjct: 771 NMAAT 775
>AE014296-771|AAF47842.3| 887|Drosophila melanogaster CG14998-PA,
isoform A protein.
Length = 887
Score = 30.3 bits (65), Expect = 2.6
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 650 NVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 471
N +LL E+ V E ++ D+ L+ D +A + I+ ++Q LN
Sbjct: 799 NGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVAPVATQLIDLSIESQDLHLN 858
Query: 470 NTNSILTNLASS 435
N NS+LT+ A++
Sbjct: 859 NNNSLLTSTAAT 870
>AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD,
isoform D protein.
Length = 983
Score = 30.3 bits (65), Expect = 2.6
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 650 NVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 471
N +LL E+ V E ++ D+ L+ D +A + I+ ++Q LN
Sbjct: 895 NGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVAPVATQLIDLSIESQDLHLN 954
Query: 470 NTNSILTNLASS 435
N NS+LT+ A++
Sbjct: 955 NNNSLLTSTAAT 966
>AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE,
isoform E protein.
Length = 898
Score = 30.3 bits (65), Expect = 2.6
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 650 NVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 471
N +LL E+ V E ++ D+ L+ D +A + I+ ++Q LN
Sbjct: 810 NGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVAPVATQLIDLSIESQDLHLN 869
Query: 470 NTNSILTNLASS 435
N NS+LT+ A++
Sbjct: 870 NNNSLLTSTAAT 881
>AE014296-768|AAF47841.3| 851|Drosophila melanogaster CG14998-PB,
isoform B protein.
Length = 851
Score = 30.3 bits (65), Expect = 2.6
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 650 NVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 471
N +LL E+ V E ++ D+ L+ D +A + I+ ++Q LN
Sbjct: 763 NGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVAPVATQLIDLSIESQDLHLN 822
Query: 470 NTNSILTNLASS 435
N NS+LT+ A++
Sbjct: 823 NNNSLLTSTAAT 834
>AE014296-767|AAN11586.2| 833|Drosophila melanogaster CG14998-PC,
isoform C protein.
Length = 833
Score = 30.3 bits (65), Expect = 2.6
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 650 NVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 471
N +LL E+ V E ++ D+ L+ D +A + I+ ++Q LN
Sbjct: 745 NGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVAPVATQLIDLSIESQDLHLN 804
Query: 470 NTNSILTNLASS 435
N NS+LT+ A++
Sbjct: 805 NNNSLLTSTAAT 816
>AE013599-2370|AAF57935.1| 394|Drosophila melanogaster CG6472-PA
protein.
Length = 394
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 122 PSKRCAPQQMFLLCRTTGRVPFF 54
P++RC P MF +CR G P F
Sbjct: 287 PAQRCEPSDMFGICREPGGGPAF 309
>BT001476-1|AAN71231.1| 607|Drosophila melanogaster LD19244p
protein.
Length = 607
Score = 28.7 bits (61), Expect = 8.1
Identities = 24/74 (32%), Positives = 32/74 (43%)
Frame = -3
Query: 273 THGNVDNKISMSDKTPTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTLRTTAD 94
T V NK KS G + + E V P K+S K +Q A + TT D
Sbjct: 463 TEDEVGNKEDGEKDKQKSKSSGSSPSSSEDEV--PLKRSNKFKQPPAKKKARKL--TTLD 518
Query: 93 VSSLQNHGESAVFQ 52
VSS ++HG F+
Sbjct: 519 VSSEEDHGSDEDFK 532
>AF145609-1|AAD38584.1| 974|Drosophila melanogaster BcDNA.GH02833
protein.
Length = 974
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/74 (22%), Positives = 31/74 (41%)
Frame = -3
Query: 288 RYQKYTHGNVDNKISMSDKTPTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTL 109
R ++ G D + S ++ SGG + ++ K KKS ++ ++ T
Sbjct: 195 RQKRREEGGGDQEASADEEDAKNNSGGGSPRVKPSSAVKESKKSSDIEDSGESGEESATS 254
Query: 108 RTTADVSSLQNHGE 67
D SS Q+ G+
Sbjct: 255 DEEPDESSAQSPGQ 268
>AE014298-2568|AAO41693.1| 975|Drosophila melanogaster CG8611-PB,
isoform B protein.
Length = 975
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/74 (22%), Positives = 31/74 (41%)
Frame = -3
Query: 288 RYQKYTHGNVDNKISMSDKTPTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTL 109
R ++ G D + S ++ SGG + ++ K KKS ++ ++ T
Sbjct: 196 RQKRREEGGGDQEASADEEDAKNNSGGGSPRVKPSSAVKESKKSSDIEDSGESGEESATS 255
Query: 108 RTTADVSSLQNHGE 67
D SS Q+ G+
Sbjct: 256 DEEPDESSAQSPGQ 269
>AE014298-2567|AAF48727.2| 974|Drosophila melanogaster CG8611-PA,
isoform A protein.
Length = 974
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/74 (22%), Positives = 31/74 (41%)
Frame = -3
Query: 288 RYQKYTHGNVDNKISMSDKTPTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTL 109
R ++ G D + S ++ SGG + ++ K KKS ++ ++ T
Sbjct: 195 RQKRREEGGGDQEASADEEDAKNNSGGGSPRVKPSSAVKESKKSSDIEDSGESGEESATS 254
Query: 108 RTTADVSSLQNHGE 67
D SS Q+ G+
Sbjct: 255 DEEPDESSAQSPGQ 268
>AE014296-2785|AAN11739.2| 657|Drosophila melanogaster CG3849-PB,
isoform B protein.
Length = 657
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 510 HQHDAANAAQRVEQHQLYFDQFSVEHHKHQWYAQQ 406
HQ Q+ +Q+Q + Q + H+HQ Y QQ
Sbjct: 177 HQQQQQLQHQQQQQYQQHQQQLQQQQHQHQHYLQQ 211
>AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA
protein.
Length = 2759
Score = 28.7 bits (61), Expect = 8.1
Identities = 24/74 (32%), Positives = 32/74 (43%)
Frame = -3
Query: 273 THGNVDNKISMSDKTPTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTLRTTAD 94
T V NK KS G + + E V P K+S K +Q A + TT D
Sbjct: 1619 TEDEVGNKEDGEKDKQKSKSSGSSPSSSEDEV--PLKRSNKFKQPPAKKKARKL--TTLD 1674
Query: 93 VSSLQNHGESAVFQ 52
VSS ++HG F+
Sbjct: 1675 VSSEEDHGSDEDFK 1688
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,073,309
Number of Sequences: 53049
Number of extensions: 541206
Number of successful extensions: 2165
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2154
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -