Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16d04
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 215 2e-56
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 110 1e-24
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 107 1e-23
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 105 5e-23
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 104 6e-23
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 104 6e-23
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 101 6e-22
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 101 6e-22
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 99 2e-21
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 99 2e-21
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 99 2e-21
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 99 2e-21
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 97 9e-21
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 86 3e-17
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 71 7e-13
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 51 8e-07
Z81058-6|CAB62801.2| 252|Caenorhabditis elegans Hypothetical pr... 28 8.3
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 28 8.3
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 28 8.3
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 28 8.3
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 28 8.3
U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical p... 28 8.3
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 215 bits (526), Expect = 2e-56
Identities = 104/202 (51%), Positives = 141/202 (69%), Gaps = 1/202 (0%)
Frame = -3
Query: 750 LGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIA 571
LG+CD+V V E+GD VVVF +S +++TI+IRGS+ + +DD+ERA+DD VNT+K +
Sbjct: 377 LGHCDSVAVQEIGDENVVVFDKKSETGKVATIIIRGSSQSRIDDVERAVDDAVNTYKALT 436
Query: 570 RDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEV 391
+DG+ + GAGA EIELA+++ F PGLEQYA++KFA ALE++P+A+A+N+G TE
Sbjct: 437 KDGKLLAGAGAVEIELAKEIESFGAKAPGLEQYAIKKFAHALETLPKAIAENAGMPTTET 496
Query: 390 VNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQ 211
+ K+Y H G+KNAG DI DA I D Y K IK A AA+TILKVDQ
Sbjct: 497 LTKLYAEHVAGKKNAGIDIWKRE--TMDAVVNNIFDLYAGKRLAIKLATDAASTILKVDQ 554
Query: 210 IIMAKRA-GGPKPRAPAGSDDE 148
IIM+K+A GGPKPR P D++
Sbjct: 555 IIMSKQATGGPKPRGPKAQDED 576
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 110 bits (264), Expect = 1e-24
Identities = 68/208 (32%), Positives = 111/208 (53%), Gaps = 8/208 (3%)
Frame = -3
Query: 750 LGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIA 571
LG+ D + + + D +++ K S + S+I++RG+ D +D++ER++ D + + +
Sbjct: 348 LGHADEIVQERISDDELILIKGPKSRTA-SSIILRGANDVMLDEMERSVHDSLCVVRRVL 406
Query: 570 RDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEV 391
+ V G GA E L+ L +A TL EQ AV +FA AL IP+ LA N+ ++T++
Sbjct: 407 ESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDL 466
Query: 390 VNKIYKAHKEGQ--------KNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAA 235
V K+ H + Q K AG D+ E + D KE GI++ L K +K+A AA
Sbjct: 467 VTKLRAYHSKAQLIPQLQHLKWAGLDL--EEGTIRDNKEAGILEPALSKVKSLKFATEAA 524
Query: 234 TTILKVDQIIMAKRAGGPKPRAPAGSDD 151
TIL++D +I + + P G DD
Sbjct: 525 ITILRIDDLIKLDK------QEPLGGDD 546
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 107 bits (256), Expect = 1e-23
Identities = 67/208 (32%), Positives = 110/208 (52%), Gaps = 8/208 (3%)
Frame = -3
Query: 750 LGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIA 571
LG+ D + + + D +++ K S + S+I++RG+ D +D++ER++ D + + +
Sbjct: 348 LGHADEIVQERISDDELILIKGPKSRTA-SSIILRGANDVMLDEMERSVHDSLCVVRRVL 406
Query: 570 RDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEV 391
+ V G GA E L+ L +A TL EQ AV +FA AL IP+ LA N+ ++T++
Sbjct: 407 ESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDL 466
Query: 390 VNKIYKAHKEGQ--------KNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAA 235
V + H + Q K AG D+ E + D KE GI++ L K +K+A AA
Sbjct: 467 VTFLRAYHSKAQLIPQLQHLKWAGLDL--EEGTIRDNKEAGILEPALSKVKSLKFATEAA 524
Query: 234 TTILKVDQIIMAKRAGGPKPRAPAGSDD 151
TIL++D +I + + P G DD
Sbjct: 525 ITILRIDDLIKLDK------QEPLGGDD 546
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 105 bits (251), Expect = 5e-23
Identities = 59/185 (31%), Positives = 96/185 (51%)
Frame = -3
Query: 753 ELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGI 574
+ G CD + +G+ R++ F S +V+RG+T +D+ ER++ D +
Sbjct: 336 QFGSCDLIEEIMIGEDRLLRFSGVKLGEACS-VVLRGATQQILDESERSLHDALCVLVTH 394
Query: 573 ARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATE 394
++ + V GAGA+EI ++ + A + G E AV F AL +P + DN+G ++ E
Sbjct: 395 VKESKTVAGAGASEILMSSAIAVEAQKVAGKESLAVEAFGRALAQLPTIICDNAGLDSAE 454
Query: 393 VVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVD 214
+V ++ H G+ N G DI E V D + G+I+SY +K + A A IL+VD
Sbjct: 455 LVTRLRAEHANGRHNMGIDI--EKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVD 512
Query: 213 QIIMA 199
II A
Sbjct: 513 DIIKA 517
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 104 bits (250), Expect = 6e-23
Identities = 59/185 (31%), Positives = 96/185 (51%)
Frame = -3
Query: 753 ELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGI 574
+ G CD + +G+ R++ F S +V+RG+T +D+ ER++ D +
Sbjct: 336 QFGSCDLIEEIMIGEDRLLRFSGVKLGEACS-VVLRGATQQILDESERSLHDALCVLVTH 394
Query: 573 ARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATE 394
++ + V GAGA+EI ++ + A + G E AV F AL +P + DN+G ++ E
Sbjct: 395 VKESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAE 454
Query: 393 VVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVD 214
+V ++ H G+ N G DI E V D + G+I+SY +K + A A IL+VD
Sbjct: 455 LVTRLRAEHANGRHNMGIDI--EKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVD 512
Query: 213 QIIMA 199
II A
Sbjct: 513 DIIKA 517
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 104 bits (250), Expect = 6e-23
Identities = 59/185 (31%), Positives = 96/185 (51%)
Frame = -3
Query: 753 ELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGI 574
+ G CD + +G+ R++ F S +V+RG+T +D+ ER++ D +
Sbjct: 336 QFGSCDLIEEIMIGEDRLLRFSGVKLGEACS-VVLRGATQQILDESERSLHDALCVLVTH 394
Query: 573 ARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATE 394
++ + V GAGA+EI ++ + A + G E AV F AL +P + DN+G ++ E
Sbjct: 395 VKESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAE 454
Query: 393 VVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVD 214
+V ++ H G+ N G DI E V D + G+I+SY +K + A A IL+VD
Sbjct: 455 LVTRLRAEHANGRHNMGIDI--EKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVD 512
Query: 213 QIIMA 199
II A
Sbjct: 513 DIIKA 517
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 101 bits (242), Expect = 6e-22
Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Frame = -3
Query: 750 LGYCDAVH-VDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGI 574
LGY D V + GD +V+ + +I++RGS +++ +R+I D + + +
Sbjct: 356 LGYADLVEEIPTGGDGKVIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDALCVIRCL 415
Query: 573 ARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATE 394
+ +PG GA E+E+A +L A T G QY R FA ALE IP LA+N+G +
Sbjct: 416 VKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIH 475
Query: 393 VVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVD 214
V ++ H G N+ + ++ V D E+ ++ L+ IK A +ILK+D
Sbjct: 476 TVTELRNNHANG--NSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKID 533
Query: 213 QIIMAKR 193
I+MA R
Sbjct: 534 DIVMAVR 540
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 101 bits (242), Expect = 6e-22
Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Frame = -3
Query: 750 LGYCDAVH-VDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGI 574
LGY D V + GD +V+ + +I++RGS +++ +R+I D + + +
Sbjct: 356 LGYADLVEEIPTGGDGKVIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDALCVIRCL 415
Query: 573 ARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATE 394
+ +PG GA E+E+A +L A T G QY R FA ALE IP LA+N+G +
Sbjct: 416 VKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIH 475
Query: 393 VVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVD 214
V ++ H G N+ + ++ V D E+ ++ L+ IK A +ILK+D
Sbjct: 476 TVTELRNNHANG--NSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKID 533
Query: 213 QIIMAKR 193
I+MA R
Sbjct: 534 DIVMAVR 540
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 99 bits (238), Expect = 2e-21
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 1/184 (0%)
Frame = -3
Query: 756 QELGYCDAVHVDEVGDTRVVVFKMESS-ESRISTIVIRGSTDNYMDDIERAIDDGVNTFK 580
++LG V G + + +E ++ TI +RG +D+ +RA+ D + +
Sbjct: 350 EKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIR 409
Query: 579 GIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANA 400
+ RD R V G G+ E+ A Q+ + AD + G+EQYA R FA ALESIP ALA+NSG
Sbjct: 410 NLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAP 469
Query: 399 TEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILK 220
+ ++ + KA + + ID+ G D KE+ +I++ L K I A ILK
Sbjct: 470 IDALSDL-KAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILK 528
Query: 219 VDQI 208
+D +
Sbjct: 529 IDDV 532
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 99 bits (238), Expect = 2e-21
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 1/184 (0%)
Frame = -3
Query: 756 QELGYCDAVHVDEVGDTRVVVFKMESS-ESRISTIVIRGSTDNYMDDIERAIDDGVNTFK 580
++LG V G + + +E ++ TI +RG +D+ +RA+ D + +
Sbjct: 350 EKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIR 409
Query: 579 GIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANA 400
+ RD R V G G+ E+ A Q+ + AD + G+EQYA R FA ALESIP ALA+NSG
Sbjct: 410 NLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAP 469
Query: 399 TEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILK 220
+ ++ + KA + + ID+ G D KE+ +I++ L K I A ILK
Sbjct: 470 IDALSDL-KAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILK 528
Query: 219 VDQI 208
+D +
Sbjct: 529 IDDV 532
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 99 bits (238), Expect = 2e-21
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 1/184 (0%)
Frame = -3
Query: 756 QELGYCDAVHVDEVGDTRVVVFKMESS-ESRISTIVIRGSTDNYMDDIERAIDDGVNTFK 580
++LG V G + + +E ++ TI +RG +D+ +RA+ D + +
Sbjct: 144 EKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIR 203
Query: 579 GIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANA 400
+ RD R V G G+ E+ A Q+ + AD + G+EQYA R FA ALESIP ALA+NSG
Sbjct: 204 NLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAP 263
Query: 399 TEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILK 220
+ ++ + KA + + ID+ G D KE+ +I++ L K I A ILK
Sbjct: 264 IDALSDL-KAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILK 322
Query: 219 VDQI 208
+D +
Sbjct: 323 IDDV 326
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 99 bits (238), Expect = 2e-21
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 1/184 (0%)
Frame = -3
Query: 756 QELGYCDAVHVDEVGDTRVVVFKMESS-ESRISTIVIRGSTDNYMDDIERAIDDGVNTFK 580
++LG V G + + +E ++ TI +RG +D+ +RA+ D + +
Sbjct: 350 EKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIR 409
Query: 579 GIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANA 400
+ RD R V G G+ E+ A Q+ + AD + G+EQYA R FA ALESIP ALA+NSG
Sbjct: 410 NLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAP 469
Query: 399 TEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILK 220
+ ++ + KA + + ID+ G D KE+ +I++ L K I A ILK
Sbjct: 470 IDALSDL-KAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILK 528
Query: 219 VDQI 208
+D +
Sbjct: 529 IDDV 532
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 97.5 bits (232), Expect = 9e-21
Identities = 59/197 (29%), Positives = 102/197 (51%), Gaps = 2/197 (1%)
Frame = -3
Query: 750 LGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIA 571
LG C + +VG R F+ + S+++ T+++RG + ++ + ER++ D + +
Sbjct: 340 LGKCGKFYEQQVGSERYNFFE-DCSKAQACTLLLRGGAEQFIAETERSLHDAIMIVRRAK 398
Query: 570 RDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEV 391
++ V G GA E+EL++ + E + + G +Q + A E IPR L N+G +A +V
Sbjct: 399 KNDSIVAGGGAIEMELSRLIREHSKGIEGKDQAFWMAYGQAFEIIPRQLCQNAGLDALDV 458
Query: 390 VNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQ 211
+NK+ H +G+K AG DI E V D + + ++K I A AA +L +DQ
Sbjct: 459 LNKLRHRHAQGEKWAGIDIHRE--AVGDNLVACVWEPSIVKRNAITAATEAACLVLSIDQ 516
Query: 210 IIMAKR--AGGPKPRAP 166
+ R +GG P P
Sbjct: 517 TVKNVRTPSGGAMPGLP 533
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 85.8 bits (203), Expect = 3e-17
Identities = 41/163 (25%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Frame = -3
Query: 660 TIVIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGL 481
T+V+RG + + ++++ER + D ++ + I + + VPG GA E+ L++++ + + G+
Sbjct: 375 TVVLRGPSKDVINEVERNLQDSLHVVRNIMINPKLVPGGGALEMALSREIEQQGAKMDGV 434
Query: 480 EQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAK 301
+++ + +ALE IPR L N G + + ++ H + +N F +D + + D
Sbjct: 435 KKWPYKAIGLALEVIPRTLIQNCGGSTIRKMTELRAIHAQNAENWTFGVDGTSGDLVDMN 494
Query: 300 EKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMA--KRAGGPK 178
+ I D ++ +K A+ + +L++D I+ K GG K
Sbjct: 495 KLEIWDPLAVRIQVLKTAIETSVMLLRIDDIVSGTKKAVGGEK 537
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 71.3 bits (167), Expect = 7e-13
Identities = 52/195 (26%), Positives = 88/195 (45%)
Frame = -3
Query: 756 QELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKG 577
++LG+ V+ +G+ + F E + T++I+G + + I+ AI DG+
Sbjct: 346 EDLGWAGLVYEHSLGEEKYT-FIEECRAPKSVTLLIKGPNKHTITQIKDAIHDGLRAVFN 404
Query: 576 IARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANAT 397
D +PGA A EI L + + L G + FA AL IP+ LA N G +A
Sbjct: 405 TIVDKAVLPGAAAFEIAAYVMLKKDVENLKGRAKLGAEAFAQALLVIPKTLAVNGGYDAQ 464
Query: 396 EVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKV 217
E + K+ + + +D E G + +GI D+ +K I A A +L V
Sbjct: 465 ETLVKLIEEKTAAGPDIAVGLDLETGGA--VEPQGIWDNVTVKKNSISSATVLACNLLLV 522
Query: 216 DQIIMAKRAGGPKPR 172
D+++ A +P+
Sbjct: 523 DEVMRAGMTNLKQPQ 537
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 51.2 bits (117), Expect = 8e-07
Identities = 26/103 (25%), Positives = 54/103 (52%)
Frame = -3
Query: 750 LGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIA 571
LG C + +VG R F+ + S+++ T+++RG + ++ + ER++ D + +
Sbjct: 340 LGKCGKFYEQQVGSERYNFFE-DCSKAQACTLLLRGGAEQFIAETERSLHDAIMIVRRAK 398
Query: 570 RDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALE 442
++ V G GA E+EL++ + E + + G +Q + A E
Sbjct: 399 KNDSIVAGGGAIEMELSRLIREHSKGIEGKDQAFWMAYGQAFE 441
>Z81058-6|CAB62801.2| 252|Caenorhabditis elegans Hypothetical
protein F11E6.6 protein.
Length = 252
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 230 VVAAPTAYFIPQNFKRYESIMPFSFASQTPLFSESI 337
+ A T YF K+Y I+PF + LF E +
Sbjct: 18 ISATATKYFFVSLLKKYPHILPFLASRDASLFGECV 53
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = -3
Query: 594 VNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADN 415
++ G+ D R PGA ++ + A +PG A + + +IP A+++N
Sbjct: 134 IDELMGMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNN 193
Query: 414 ------SGANATEV-VNKIYKAHKEGQKNAGFDIDSEN 322
S A + + + K+ A G N+G D D E+
Sbjct: 194 FRQVVSSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPED 231
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = -3
Query: 594 VNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADN 415
++ G+ D R PGA ++ + A +PG A + + +IP A+++N
Sbjct: 134 IDELMGMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNN 193
Query: 414 ------SGANATEV-VNKIYKAHKEGQKNAGFDIDSEN 322
S A + + + K+ A G N+G D D E+
Sbjct: 194 FRQVVSSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPED 231
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = -3
Query: 594 VNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADN 415
++ G+ D R PGA ++ + A +PG A + + +IP A+++N
Sbjct: 100 IDELMGMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNN 159
Query: 414 ------SGANATEV-VNKIYKAHKEGQKNAGFDIDSEN 322
S A + + + K+ A G N+G D D E+
Sbjct: 160 FRQVVSSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPED 197
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = -3
Query: 594 VNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADN 415
++ G+ D R PGA ++ + A +PG A + + +IP A+++N
Sbjct: 160 IDELMGMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNN 219
Query: 414 ------SGANATEV-VNKIYKAHKEGQKNAGFDIDSEN 322
S A + + + K+ A G N+G D D E+
Sbjct: 220 FRQVVSSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPED 257
>U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical
protein C27H5.6 protein.
Length = 322
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -1
Query: 494 LCPV*NS--ML*GSLQ--WLLRAYLVLWQITQVPMPLKL*TKFTRHTRRDKKMLVLIL 333
+C V NS ++ G++ W+ +Y++ + +T +KF HT + K+M +LIL
Sbjct: 170 MCAVMNSTGIVYGTIHYCWIACSYMIAFAVTLNLFLRSHGSKFLNHTEKRKQMAILIL 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,895,084
Number of Sequences: 27780
Number of extensions: 354102
Number of successful extensions: 1128
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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