Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16c24
(273 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001578-1|AAN71333.1| 1002|Drosophila melanogaster RE23622p pro... 34 0.031
AY134669-1|AAN39118.1| 968|Drosophila melanogaster peptidylprol... 34 0.031
AE014297-4230|AAF56786.1| 970|Drosophila melanogaster CG1866-PA... 34 0.031
AY061295-1|AAL28843.1| 517|Drosophila melanogaster LD20635p pro... 30 0.38
AE013599-2245|AAF58019.1| 517|Drosophila melanogaster CG7747-PA... 30 0.38
BT021266-1|AAX33414.1| 205|Drosophila melanogaster RE50843p pro... 29 0.89
AY070975-1|AAL48597.1| 176|Drosophila melanogaster RE07451p pro... 29 0.89
AE014296-107|AAF47391.1| 176|Drosophila melanogaster CG13892-PA... 29 0.89
AE013599-3427|AAG22196.1| 120|Drosophila melanogaster CG2852-PB... 29 0.89
AE013599-3426|AAF46873.1| 205|Drosophila melanogaster CG2852-PA... 29 0.89
AY113541-1|AAM29546.1| 161|Drosophila melanogaster RE61564p pro... 29 1.2
AE013599-1109|AAM68761.1| 161|Drosophila melanogaster CG11777-P... 29 1.2
AY070988-1|AAL48610.1| 502|Drosophila melanogaster RE08109p pro... 28 1.5
AE014296-2031|AAF50009.1| 502|Drosophila melanogaster CG10907-P... 28 1.5
AY113334-1|AAM29339.1| 370|Drosophila melanogaster AT31172p pro... 28 2.0
AE014298-799|AAF46085.1| 370|Drosophila melanogaster CG15767-PA... 28 2.0
BT021376-1|AAX33524.1| 758|Drosophila melanogaster LD46788p pro... 23 3.3
AE014298-972|AAF46216.3| 758|Drosophila melanogaster CG33691-PA... 23 3.3
AE014298-971|AAZ52507.1| 702|Drosophila melanogaster CG33691-PC... 23 3.3
BT011449-1|AAR99107.1| 161|Drosophila melanogaster RE40650p pro... 27 3.6
>BT001578-1|AAN71333.1| 1002|Drosophila melanogaster RE23622p
protein.
Length = 1002
Score = 33.9 bits (74), Expect = 0.031
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -1
Query: 255 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVVE 76
LLSM + F IT +P P D +VVFG++I E + GL +SRP+ +
Sbjct: 146 LLSMANRGKNTNGSQFFITTQPAPHLDNIHVVFGQVISGQELVRQLEGLPVDRNSRPLQD 205
Query: 75 ISAA 64
+ A
Sbjct: 206 AAIA 209
>AY134669-1|AAN39118.1| 968|Drosophila melanogaster peptidylprolyl
cis-trans isomerase protein.
Length = 968
Score = 33.9 bits (74), Expect = 0.031
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -1
Query: 255 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVVE 76
LLSM + F IT +P P D +VVFG++I E + GL +SRP+ +
Sbjct: 114 LLSMANRGKNTNGSQFFITTQPAPHLDNIHVVFGQVISGQELVRQLEGLPVDRNSRPLQD 173
Query: 75 ISAA 64
+ A
Sbjct: 174 AAIA 177
>AE014297-4230|AAF56786.1| 970|Drosophila melanogaster CG1866-PA,
isoform A protein.
Length = 970
Score = 33.9 bits (74), Expect = 0.031
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -1
Query: 255 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVVE 76
LLSM + F IT +P P D +VVFG++I E + GL +SRP+ +
Sbjct: 114 LLSMANRGKNTNGSQFFITTQPAPHLDNIHVVFGQVISGQELVRQLEGLPVDRNSRPLQD 173
Query: 75 ISAA 64
+ A
Sbjct: 174 AAIA 177
>AY061295-1|AAL28843.1| 517|Drosophila melanogaster LD20635p
protein.
Length = 517
Score = 30.3 bits (65), Expect = 0.38
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G+LSM + + F IT++ D ++ +FG+L+ +T + + + RP+
Sbjct: 364 GVLSMANSGPNTNGSQFFITYRSCKHLDGKHTIFGKLVGGLDTLQKMENIEVDNKDRPIE 423
Query: 78 EI 73
+I
Sbjct: 424 DI 425
>AE013599-2245|AAF58019.1| 517|Drosophila melanogaster CG7747-PA
protein.
Length = 517
Score = 30.3 bits (65), Expect = 0.38
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G+LSM + + F IT++ D ++ +FG+L+ +T + + + RP+
Sbjct: 364 GVLSMANSGPNTNGSQFFITYRSCKHLDGKHTIFGKLVGGLDTLQKMENIEVDNKDRPIE 423
Query: 78 EI 73
+I
Sbjct: 424 DI 425
>BT021266-1|AAX33414.1| 205|Drosophila melanogaster RE50843p
protein.
Length = 205
Score = 29.1 bits (62), Expect = 0.89
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G LSM D F IT K D R+VVFG+++ I RPV
Sbjct: 121 GWLSMANAGKDTNGSQFFITTKQTSWLDGRHVVFGKILSGMNVVRQIENSATDARDRPVK 180
Query: 78 EISAA 64
++ A
Sbjct: 181 DVVIA 185
>AY070975-1|AAL48597.1| 176|Drosophila melanogaster RE07451p
protein.
Length = 176
Score = 29.1 bits (62), Expect = 0.89
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G+LSM + D F IT P D ++ +FGR+ E + I + + RPV
Sbjct: 105 GILSMANSGPDTNGSQFFITLAPTQWLDGKHTIFGRVYTGMEVVKRIGMVETDKNDRPVD 164
Query: 78 EISAAKHCVD 49
+ K V+
Sbjct: 165 PLRIIKAKVE 174
>AE014296-107|AAF47391.1| 176|Drosophila melanogaster CG13892-PA
protein.
Length = 176
Score = 29.1 bits (62), Expect = 0.89
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G+LSM + D F IT P D ++ +FGR+ E + I + + RPV
Sbjct: 105 GILSMANSGPDTNGSQFFITLAPTQWLDGKHTIFGRVYTGMEVVKRIGMVETDKNDRPVD 164
Query: 78 EISAAKHCVD 49
+ K V+
Sbjct: 165 PLRIIKAKVE 174
>AE013599-3427|AAG22196.1| 120|Drosophila melanogaster CG2852-PB,
isoform B protein.
Length = 120
Score = 29.1 bits (62), Expect = 0.89
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G LSM D F IT K D R+VVFG+++ I RPV
Sbjct: 36 GWLSMANAGKDTNGSQFFITTKQTSWLDGRHVVFGKILSGMNVVRQIENSATDARDRPVK 95
Query: 78 EISAA 64
++ A
Sbjct: 96 DVVIA 100
>AE013599-3426|AAF46873.1| 205|Drosophila melanogaster CG2852-PA,
isoform A protein.
Length = 205
Score = 29.1 bits (62), Expect = 0.89
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G LSM D F IT K D R+VVFG+++ I RPV
Sbjct: 121 GWLSMANAGKDTNGSQFFITTKQTSWLDGRHVVFGKILSGMNVVRQIENSATDARDRPVK 180
Query: 78 EISAA 64
++ A
Sbjct: 181 DVVIA 185
>AY113541-1|AAM29546.1| 161|Drosophila melanogaster RE61564p
protein.
Length = 161
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGA-PLSSRPV 82
G++SM + F IT+ P DL+ +FGR+I + + + L P + RP
Sbjct: 85 GMVSMANNGPNANASQFFITYAAQPNLDLKYTLFGRVIDGFDALDELEKLPVNPKNYRPH 144
Query: 81 VE 76
V+
Sbjct: 145 VD 146
>AE013599-1109|AAM68761.1| 161|Drosophila melanogaster CG11777-PA
protein.
Length = 161
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGA-PLSSRPV 82
G++SM + F IT+ P DL+ +FGR+I + + + L P + RP
Sbjct: 85 GMVSMANNGPNANASQFFITYAAQPNLDLKYTLFGRVIDGFDALDELEKLPVNPKNYRPH 144
Query: 81 VE 76
V+
Sbjct: 145 VD 146
>AY070988-1|AAL48610.1| 502|Drosophila melanogaster RE08109p
protein.
Length = 502
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRL 148
GL+ M + D+ F TF P P+ +N +FG++
Sbjct: 97 GLVGMANSGKDDNGSQFFFTFAPTPELQNKNTLFGKI 133
>AE014296-2031|AAF50009.1| 502|Drosophila melanogaster CG10907-PA
protein.
Length = 502
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRL 148
GL+ M + D+ F TF P P+ +N +FG++
Sbjct: 97 GLVGMANSGKDDNGSQFFFTFAPTPELQNKNTLFGKI 133
>AY113334-1|AAM29339.1| 370|Drosophila melanogaster AT31172p
protein.
Length = 370
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 210 FNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLS--SRPVV 79
F+I+FKPLP + V FGR+I + E + G SRP++
Sbjct: 318 FSISFKPLPVARGQRVGFGRVIRGDKVIEAMEAHGTKNGKISRPLL 363
>AE014298-799|AAF46085.1| 370|Drosophila melanogaster CG15767-PA
protein.
Length = 370
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 210 FNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLS--SRPVV 79
F+I+FKPLP + V FGR+I + E + G SRP++
Sbjct: 318 FSISFKPLPVARGQRVGFGRVIRGDKVIEAMEAHGTKNGKISRPLL 363
>BT021376-1|AAX33524.1| 758|Drosophila melanogaster LD46788p
protein.
Length = 758
Score = 23.4 bits (48), Expect(2) = 3.3
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3
Query: 103 PAQLASGGGDIGG 65
P+ L+SGGG +GG
Sbjct: 406 PSPLSSGGGGVGG 418
Score = 22.2 bits (45), Expect(2) = 3.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 88 SGGGDIGGKTLRRQXVGCTGKSNS 17
+ GG G T R++ V C+ KSN+
Sbjct: 425 AAGGASSGATGRQKSVICSTKSNN 448
>AE014298-972|AAF46216.3| 758|Drosophila melanogaster CG33691-PA,
isoform A protein.
Length = 758
Score = 23.4 bits (48), Expect(2) = 3.3
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3
Query: 103 PAQLASGGGDIGG 65
P+ L+SGGG +GG
Sbjct: 406 PSPLSSGGGGVGG 418
Score = 22.2 bits (45), Expect(2) = 3.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 88 SGGGDIGGKTLRRQXVGCTGKSNS 17
+ GG G T R++ V C+ KSN+
Sbjct: 425 AAGGASSGATGRQKSVICSTKSNN 448
>AE014298-971|AAZ52507.1| 702|Drosophila melanogaster CG33691-PC,
isoform C protein.
Length = 702
Score = 23.4 bits (48), Expect(2) = 3.3
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3
Query: 103 PAQLASGGGDIGG 65
P+ L+SGGG +GG
Sbjct: 350 PSPLSSGGGGVGG 362
Score = 22.2 bits (45), Expect(2) = 3.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 88 SGGGDIGGKTLRRQXVGCTGKSNS 17
+ GG G T R++ V C+ KSN+
Sbjct: 369 AAGGASSGATGRQKSVICSTKSNN 392
>BT011449-1|AAR99107.1| 161|Drosophila melanogaster RE40650p
protein.
Length = 161
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLI 145
G++SM + F IT+ P DL+ +FGR+I
Sbjct: 85 GMVSMANNGPNANASQFFITYAAQPNLDLKYTLFGRVI 122
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,007,236
Number of Sequences: 53049
Number of extensions: 191322
Number of successful extensions: 504
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 24,988,368
effective HSP length: 69
effective length of database: 21,327,987
effective search space used: 447887727
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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