Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16c24
(273 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 33 0.037
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 33 0.037
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 33 0.037
Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical pr... 31 0.15
Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical pr... 31 0.15
U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin iso... 31 0.15
AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin M... 31 0.15
Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical pr... 30 0.26
Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical pr... 30 0.26
U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin iso... 30 0.26
AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein. 30 0.26
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 29 0.34
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 29 0.34
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 29 0.34
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 29 0.34
U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with ta... 29 0.34
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 29 0.34
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 29 0.34
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 29 0.34
U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin iso... 29 0.59
U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin pro... 29 0.59
U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin pro... 29 0.59
U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical pr... 28 1.0
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 1.0
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 27 2.4
U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin pro... 27 2.4
U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical pr... 26 4.2
U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin pro... 26 4.2
U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin pro... 26 4.2
U40943-1|AAK72061.2| 398|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical p... 25 7.3
U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin iso... 25 7.3
U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin iso... 25 7.3
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical pr... 25 9.7
U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin iso... 25 9.7
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.037
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -1
Query: 255 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVVE 76
LLSM D F IT + +P D ++ VFG +I E + I L +PV +
Sbjct: 108 LLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVIKGVEVVKAIENLETGNEDKPVCK 167
Query: 75 ISAAKHC 55
+ HC
Sbjct: 168 VEIT-HC 173
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 32.7 bits (71), Expect = 0.037
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -1
Query: 255 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVVE 76
LLSM D F IT + +P D ++ VFG +I E + I L +PV +
Sbjct: 108 LLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVIKGVEVVKAIENLETGNEDKPVCK 167
Query: 75 ISAAKHC 55
+ HC
Sbjct: 168 VEIT-HC 173
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 32.7 bits (71), Expect = 0.037
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -1
Query: 255 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVVE 76
LLSM D F IT + +P D ++ VFG +I E + I L +PV +
Sbjct: 108 LLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVIKGVEVVKAIENLETGNEDKPVCK 167
Query: 75 ISAAKHC 55
+ HC
Sbjct: 168 VEIT-HC 173
>Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 30.7 bits (66), Expect = 0.15
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGL 109
G+LSM + F ITF+P D ++ +FGRL+ +T I L
Sbjct: 364 GVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTIEKL 413
>Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 30.7 bits (66), Expect = 0.15
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGL 109
G+LSM + F ITF+P D ++ +FGRL+ +T I L
Sbjct: 364 GVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTIEKL 413
>U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin
isoform 4 protein.
Length = 523
Score = 30.7 bits (66), Expect = 0.15
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGL 109
G+LSM + F ITF+P D ++ +FGRL+ +T I L
Sbjct: 364 GVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTIEKL 413
>AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin
MOG-6 protein.
Length = 523
Score = 30.7 bits (66), Expect = 0.15
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGL 109
G+LSM + F ITF+P D ++ +FGRL+ +T I L
Sbjct: 364 GVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTIEKL 413
>Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical
protein F31C3.1 protein.
Length = 204
Score = 29.9 bits (64), Expect = 0.26
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPV- 82
G LSM D F IT P D R+VVFG+++ + I RP
Sbjct: 121 GWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGMDVVRKIEQTEKLPGDRPKQ 180
Query: 81 -VEISAAKH-CVDXPLGVPESLIV 16
V I+A+ H VD P V +V
Sbjct: 181 DVIIAASGHIAVDTPFSVEREAVV 204
>Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical
protein T23G7.1 protein.
Length = 598
Score = 29.9 bits (64), Expect = 0.26
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 111 LGAPLSSRPVVEISAAKHCVDXPLGVPES 25
+G P SRP V +S + V P G+P S
Sbjct: 10 IGQPAQSRPQVSLSMGRRIVQMPTGLPRS 38
>U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin
isoform 5 protein.
Length = 204
Score = 29.9 bits (64), Expect = 0.26
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPV- 82
G LSM D F IT P D R+VVFG+++ + I RP
Sbjct: 121 GWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGMDVVRKIEQTEKLPGDRPKQ 180
Query: 81 -VEISAAKH-CVDXPLGVPESLIV 16
V I+A+ H VD P V +V
Sbjct: 181 DVIIAASGHIAVDTPFSVEREAVV 204
>AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein.
Length = 598
Score = 29.9 bits (64), Expect = 0.26
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 111 LGAPLSSRPVVEISAAKHCVDXPLGVPES 25
+G P SRP V +S + V P G+P S
Sbjct: 10 IGQPAQSRPQVSLSMGRRIVQMPTGLPRS 38
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 74 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 178
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 239 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 273
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 74 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 178
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 239 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 273
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 74 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 178
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 217 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 251
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 74 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 178
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 217 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 251
>U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform d protein.
Length = 252
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 74 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 178
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 91 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 125
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 74 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 178
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 239 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 273
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 74 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 178
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 239 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 273
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 29.5 bits (63), Expect = 0.34
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 74 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 178
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 239 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 273
>U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin
isoform 10 protein.
Length = 147
Score = 28.7 bits (61), Expect = 0.59
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G +SM D F IT+ D++ +FG++I +T E I + RP+V
Sbjct: 85 GCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIETIKVDNKYRPLV 144
Query: 78 E 76
+
Sbjct: 145 Q 145
>U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin
protein 10, isoform a protein.
Length = 147
Score = 28.7 bits (61), Expect = 0.59
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G +SM D F IT+ D++ +FG++I +T E I + RP+V
Sbjct: 85 GCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIETIKVDNKYRPLV 144
Query: 78 E 76
+
Sbjct: 145 Q 145
>U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin
protein 10, isoform b protein.
Length = 161
Score = 28.7 bits (61), Expect = 0.59
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G +SM D F IT+ D++ +FG++I +T E I + RP+V
Sbjct: 85 GCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIETIKVDNKYRPLV 144
Query: 78 E 76
+
Sbjct: 145 Q 145
>U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical
protein ZC155.3 protein.
Length = 845
Score = 27.9 bits (59), Expect = 1.0
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -1
Query: 255 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEV---IRGLGAPLSSRP 85
L+S R +D G+ N F P P FDL + + + F + I G APL SR
Sbjct: 127 LISHRFHEDQ---GLTNSVFVPCPSFDLDGIPICQTESEKDRFNLEMKIIGKYAPLGSRT 183
Query: 84 VVEIS 70
+ E++
Sbjct: 184 LAELA 188
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 2 SVFNSTIRLSGTPNGLSTQCFAADISTTGRELSGA 106
SVFN+T R S P ST I++T E + +
Sbjct: 574 SVFNTTARSSSLPGSTSTMSVTTSIASTSPETTSS 608
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 11 NSTIRLSGTPNGLSTQCFAADISTTGRELSGAPKPRITSKVSHGRINLPKTT 166
+ +R+S TP + +A +S ++ +P PR+TS S ++ P TT
Sbjct: 565 DKNVRMSSTPRIDAQSTPSAVVSALPTPMN-SPLPRVTSSKSAQDVSTPSTT 615
>U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin
protein 12 protein.
Length = 169
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G+LSM + F IT P D ++ +FGR+ + + + RP +
Sbjct: 94 GILSMANAGPNTNGSQFFITLAPTQHLDGKHTIFGRVAAGMKVIANMGRVDTDNHDRPKI 153
Query: 78 EISAAK 61
EI K
Sbjct: 154 EIRILK 159
>U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical
protein T22F3.12 protein.
Length = 174
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 210 FNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLG 106
F +TF+ P + +V FG L+ + + I LG
Sbjct: 115 FYVTFRETPWMNRFHVAFGELVEGFDVLDAIENLG 149
>U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin
protein.
Length = 201
Score = 25.8 bits (54), Expect = 4.2
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G LSM +D F IT D ++VVFG+++ + I RP+
Sbjct: 118 GWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIE 177
Query: 78 EISAA 64
++ A
Sbjct: 178 DVVIA 182
>U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin
protein 6 protein.
Length = 201
Score = 25.8 bits (54), Expect = 4.2
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G LSM +D F IT D ++VVFG+++ + I RP+
Sbjct: 118 GWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIE 177
Query: 78 EISAA 64
++ A
Sbjct: 178 DVVIA 182
>U40943-1|AAK72061.2| 398|Caenorhabditis elegans Hypothetical
protein F47F2.1b protein.
Length = 398
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +3
Query: 198 RLY*ICRTFRRL--SSRASTEDLQQQ 269
RL+ ICR FRRL SS +S E ++ +
Sbjct: 16 RLFRICRFFRRLMSSSTSSVESVEDE 41
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 208 KYAAHFVVFRHAHRQKTYNNR 270
K A +V RHAH+QK R
Sbjct: 98 KQAETYVTLRHAHQQKVQRRR 118
>Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 25.0 bits (52), Expect = 7.3
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -1
Query: 255 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVVE 76
LLSM + F IT P + ++VVFG ++ + I L S+P+ +
Sbjct: 106 LLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAK 165
Query: 75 I 73
+
Sbjct: 166 V 166
>Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 25.0 bits (52), Expect = 7.3
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -1
Query: 255 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVVE 76
LLSM + F IT P + ++VVFG ++ + I L S+P+ +
Sbjct: 106 LLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAK 165
Query: 75 I 73
+
Sbjct: 166 V 166
>U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 25.0 bits (52), Expect = 7.3
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -1
Query: 255 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVVE 76
LLSM + F IT P + ++VVFG ++ + I L S+P+ +
Sbjct: 106 LLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAK 165
Query: 75 I 73
+
Sbjct: 166 V 166
>U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 25.0 bits (52), Expect = 7.3
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -1
Query: 255 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVVE 76
LLSM + F IT P + ++VVFG ++ + I L S+P+ +
Sbjct: 106 LLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAK 165
Query: 75 I 73
+
Sbjct: 166 V 166
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 24.6 bits (51), Expect = 9.7
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -1
Query: 261 VGLLSMRVTKDDEMCGI-FNITF-KPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSR 88
+G++S V D M G F IT + L D ++ +FG++ ET E + A ++R
Sbjct: 91 MGIVSF-VNNGDNMLGSQFFITLGENLDYLDDQHTIFGQVTEGLETLEKLNEQLADTNNR 149
Query: 87 PVVEI 73
P +I
Sbjct: 150 PFKDI 154
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 24.6 bits (51), Expect = 9.7
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -1
Query: 261 VGLLSMRVTKDDEMCGI-FNITF-KPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSR 88
+G++S V D M G F IT + L D ++ +FG++ ET E + A ++R
Sbjct: 91 MGIVSF-VNNGDNMLGSQFFITLGENLDYLDDQHTIFGQVTEGLETLEKLNEQLADTNNR 149
Query: 87 PVVEI 73
P +I
Sbjct: 150 PFKDI 154
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 24.6 bits (51), Expect = 9.7
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -1
Query: 261 VGLLSMRVTKDDEMCGI-FNITF-KPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSR 88
+G++S V D M G F IT + L D ++ +FG++ ET E + A ++R
Sbjct: 22 MGIVSF-VNNGDNMLGSQFFITLGENLDYLDDQHTIFGQVTEGLETLEKLNEQLADTNNR 80
Query: 87 PVVEI 73
P +I
Sbjct: 81 PFKDI 85
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 178 KLRQRFEGYIKYAAHFVVFRHAHRQKTYNNR 270
K R++ + +F RH H +TYN R
Sbjct: 625 KERKKQANKCTFLQNFTFIRHQHPSQTYNER 655
>Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical
protein T01B7.4 protein.
Length = 183
Score = 24.6 bits (51), Expect = 9.7
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G+LSM D F IT D ++VVFGR++ T I + +++P +
Sbjct: 114 GMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVLDGMLTVRKIENVPTGANNKPKL 173
Query: 78 EI 73
I
Sbjct: 174 PI 175
>U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin
isoform 11 (CYP-11) protein.
Length = 183
Score = 24.6 bits (51), Expect = 9.7
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -1
Query: 258 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 79
G+LSM D F IT D ++VVFGR++ T I + +++P +
Sbjct: 114 GMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVLDGMLTVRKIENVPTGANNKPKL 173
Query: 78 EI 73
I
Sbjct: 174 PI 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,461,894
Number of Sequences: 27780
Number of extensions: 92401
Number of successful extensions: 266
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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