Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16c23
(670 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 2.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 2.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 2.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 2.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 2.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 2.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 2.6
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 23 3.5
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 23 3.5
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 4.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 4.6
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 22 4.6
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 6.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 6.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 6.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 6.1
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 6.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 6.1
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 22 6.1
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 6.1
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 8.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 8.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 8.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 8.0
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G PS G W
Sbjct: 124 PVPIYCGNFPSRPMGPW 140
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G PS G W
Sbjct: 124 PVPIYCGNFPSRPMGPW 140
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G PS G W
Sbjct: 124 PVPIYCGNFPSRPMGPW 140
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G PS G W
Sbjct: 124 PVPIYCGNFPSRPMGPW 140
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G PS G W
Sbjct: 124 PVPIYCGNFPSRPMGPW 140
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G PS G W
Sbjct: 124 PVPIYCGNFPSRPMGPW 140
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G PS G W
Sbjct: 124 PVPIYCGNFPSRPMGPW 140
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G PS G W
Sbjct: 127 PVPIYCGNFPSRPMGPW 143
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 90 KNATMNILIMHGNKCNNQFATSIAI 164
KN + IL HG +CN+ TSI +
Sbjct: 89 KNPKLGILGTHGRQCND---TSIGV 110
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 90 KNATMNILIMHGNKCNNQFATSIAI 164
KN + IL HG +CN+ TSI +
Sbjct: 90 KNPKLGILGTHGRQCND---TSIGV 111
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.6
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = -2
Query: 663 GFGYKGSIFHRVIPN 619
GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.6
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = -2
Query: 663 GFGYKGSIFHRVIPN 619
GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 22.2 bits (45), Expect = 4.6
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = -2
Query: 663 GFGYKGSIFHRVIPN 619
GFGY+ ++ ++V+P+
Sbjct: 15 GFGYESNVKYQVVPS 29
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G P G+W
Sbjct: 115 PVPVYYGNFPPRPMGSW 131
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G P G+W
Sbjct: 115 PVPVYYGNFPPRPMGSW 131
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G P G+W
Sbjct: 115 PVPVYYGNFPPRPMGSW 131
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G P G+W
Sbjct: 115 PVPVYYGNFPPRPMGSW 131
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G P G+W
Sbjct: 115 PVPVYYGNFPPRPMGSW 131
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 573 PVPLWVGEVPSLQHGNW 623
PVP++ G P G+W
Sbjct: 115 PVPVYYGNFPPRPMGSW 131
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -1
Query: 622 QFPCCKEGTSPTHNGTGGKSIYG 554
+F CKEG G G S YG
Sbjct: 383 EFGLCKEGPDVKAYGAGLLSAYG 405
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 333 LEVFPDWLPKVSICLTTSMPSTTFPKTTCLPSSQ 434
L V+P++ V +C S ++ KT C +Q
Sbjct: 643 LNVYPEFQENVQLCSEISESYSSNNKTLCKCDAQ 676
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 525 RVKFSSSNLLP*MDFP-PVPLWVGEVPSLQHGNW 623
++++ + N + + P PVP++ G P G W
Sbjct: 109 KLQYYNINYIEQIPIPVPVPIYCGNFPPRPLGPW 142
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 525 RVKFSSSNLLP*MDFP-PVPLWVGEVPSLQHGNW 623
++++ + N + + P PVP++ G P G W
Sbjct: 109 KLQYYNINYIEQIPIPVPVPIYCGNFPPRPLGPW 142
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 525 RVKFSSSNLLP*MDFP-PVPLWVGEVPSLQHGNW 623
++++ + N + + P PVP++ G P G W
Sbjct: 109 KLQYYNINYIEQIPIPVPVPIYCGNFPPRPLGPW 142
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 525 RVKFSSSNLLP*MDFP-PVPLWVGEVPSLQHGNW 623
++++ + N + + P PVP++ G P G W
Sbjct: 109 KLQYYNINYIEQIPIPVPVPIYCGNFPPRPLGPW 142
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,998
Number of Sequences: 438
Number of extensions: 4274
Number of successful extensions: 90
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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