Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16c18
(788 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061232-1|AAL28780.1| 382|Drosophila melanogaster LD17530p pro... 205 6e-53
AF145311-1|AAF08392.1| 382|Drosophila melanogaster 26S proteaso... 205 6e-53
AE014297-3373|AAF56174.1| 382|Drosophila melanogaster CG10230-P... 205 6e-53
AE014297-3372|AAF56173.1| 382|Drosophila melanogaster CG10230-P... 205 6e-53
BT024259-1|ABC86321.1| 119|Drosophila melanogaster IP15827p pro... 56 6e-08
AY118924-1|AAM50784.1| 387|Drosophila melanogaster LD23767p pro... 42 0.001
AE013599-1830|AAF58289.1| 387|Drosophila melanogaster CG8309-PA... 42 0.001
BT012433-1|AAS93704.1| 256|Drosophila melanogaster RH63621p pro... 31 1.8
AE013599-643|AAF59097.2| 278|Drosophila melanogaster CG2038-PA ... 31 1.8
AY094777-1|AAM11130.1| 195|Drosophila melanogaster LD04689p pro... 31 2.4
AM294894-1|CAL26880.1| 195|Drosophila melanogaster CG6913 protein. 31 2.4
AM294893-1|CAL26879.1| 195|Drosophila melanogaster CG6913 protein. 31 2.4
AM294892-1|CAL26878.1| 195|Drosophila melanogaster CG6913 protein. 31 2.4
AM294891-1|CAL26877.1| 195|Drosophila melanogaster CG6913 protein. 31 2.4
AM294890-1|CAL26876.1| 195|Drosophila melanogaster CG6913 protein. 31 2.4
AM294889-1|CAL26875.1| 195|Drosophila melanogaster CG6913 protein. 31 2.4
AM294888-1|CAL26874.1| 195|Drosophila melanogaster CG6913 protein. 31 2.4
AM294887-1|CAL26873.1| 195|Drosophila melanogaster CG6913 protein. 31 2.4
AM294886-1|CAL26872.1| 195|Drosophila melanogaster CG6913 protein. 31 2.4
AM294885-1|CAL26871.1| 195|Drosophila melanogaster CG6913 protein. 31 2.4
AM294884-1|CAL26870.1| 195|Drosophila melanogaster CG6913 protein. 31 2.4
AM294883-1|CAL26869.1| 195|Drosophila melanogaster CG6913 protein. 31 2.4
AF517123-1|AAN04087.1| 195|Drosophila melanogaster N-TWIST basi... 31 2.4
AF369898-1|AAK72957.1| 195|Drosophila melanogaster Fer3-like pr... 31 2.4
AE014297-1361|AAF54684.2| 195|Drosophila melanogaster CG6913-PA... 31 2.4
AE014297-66|ABI31124.1| 81|Drosophila melanogaster CG41462-PA ... 30 4.1
BT004883-1|AAO45239.1| 407|Drosophila melanogaster GH09439p pro... 29 7.2
AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p pro... 29 7.2
AF129082-1|AAD28607.1| 407|Drosophila melanogaster COP9 signalo... 29 7.2
AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9 signalo... 29 7.2
AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB... 29 7.2
AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA... 29 7.2
AE013599-559|AAF59157.1| 407|Drosophila melanogaster CG8725-PA ... 29 7.2
X67239-1|CAA47664.1| 1077|Drosophila melanogaster hairless protein. 29 9.6
M95192-1|AAA28607.1| 1059|Drosophila melanogaster hairless prote... 29 9.6
BT015220-1|AAT94449.1| 1077|Drosophila melanogaster RE41617p pro... 29 9.6
AY051806-1|AAK93230.1| 619|Drosophila melanogaster LD32021p pro... 29 9.6
AE014297-2832|AAN14358.1| 1059|Drosophila melanogaster CG5460-PC... 29 9.6
AE014297-2831|AAF55791.1| 1059|Drosophila melanogaster CG5460-PB... 29 9.6
AE014297-2830|AAN14357.1| 1077|Drosophila melanogaster CG5460-PD... 29 9.6
AE014297-2829|AAF55790.1| 1077|Drosophila melanogaster CG5460-PA... 29 9.6
>AY061232-1|AAL28780.1| 382|Drosophila melanogaster LD17530p
protein.
Length = 382
Score = 205 bits (500), Expect = 6e-53
Identities = 105/237 (44%), Positives = 146/237 (61%), Gaps = 1/237 (0%)
Frame = -1
Query: 773 EK*XEHLESTLEDADGVTPVHGRFYKLASEYYRVRGPTGRYYRAALRYVGCADGGEALPA 594
+K E L LE+A VTPVHG++Y LAS+YYR G YYR L+++GC+ + P
Sbjct: 138 KKIIEELRDVLEEAGNVTPVHGKYYMLASQYYRRVGKHSDYYRCGLQFLGCSM--DEYPR 195
Query: 593 TERADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAFER 414
+ A AF L L+ +L VY++GELLAHPIL SL+GT NEW EL+KA + GD+ F
Sbjct: 196 DQWAQQAFFLGLAALLGDGVYNIGELLAHPILESLKGTENEWLMELLKAFNTGDINKFND 255
Query: 413 IRAK-SNCDELHKADRQLRQKIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELL 237
++ S +L + +LRQKI++LCLMEM F +S+ +R +SF +IA+E ++P EVELL
Sbjct: 256 MKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDIAQETKLPAKEVELL 315
Query: 236 IMKALAEKLIRGHIDQVRSCATVQWVRPXXXXXXXXXXXXXXVDAWREAVSAAADLL 66
IMKALA L+RG IDQV + WV+P +D W A++ L+
Sbjct: 316 IMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTWMGAITNMEKLM 372
>AF145311-1|AAF08392.1| 382|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p39A protein.
Length = 382
Score = 205 bits (500), Expect = 6e-53
Identities = 105/237 (44%), Positives = 146/237 (61%), Gaps = 1/237 (0%)
Frame = -1
Query: 773 EK*XEHLESTLEDADGVTPVHGRFYKLASEYYRVRGPTGRYYRAALRYVGCADGGEALPA 594
+K E L LE+A VTPVHG++Y LAS+YYR G YYR L+++GC+ + P
Sbjct: 138 KKIIEELRDVLEEAGNVTPVHGKYYMLASQYYRRVGKHSDYYRCGLQFLGCSM--DEYPR 195
Query: 593 TERADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAFER 414
+ A AF L L+ +L VY++GELLAHPIL SL+GT NEW EL+KA + GD+ F
Sbjct: 196 DQWAQQAFFLGLAALLGDGVYNIGELLAHPILESLKGTENEWLMELLKAFNTGDINKFND 255
Query: 413 IRAK-SNCDELHKADRQLRQKIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELL 237
++ S +L + +LRQKI++LCLMEM F +S+ +R +SF +IA+E ++P EVELL
Sbjct: 256 MKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDIAQETKLPAKEVELL 315
Query: 236 IMKALAEKLIRGHIDQVRSCATVQWVRPXXXXXXXXXXXXXXVDAWREAVSAAADLL 66
IMKALA L+RG IDQV + WV+P +D W A++ L+
Sbjct: 316 IMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTWMGAITNMEKLM 372
>AE014297-3373|AAF56174.1| 382|Drosophila melanogaster CG10230-PB,
isoform B protein.
Length = 382
Score = 205 bits (500), Expect = 6e-53
Identities = 105/237 (44%), Positives = 146/237 (61%), Gaps = 1/237 (0%)
Frame = -1
Query: 773 EK*XEHLESTLEDADGVTPVHGRFYKLASEYYRVRGPTGRYYRAALRYVGCADGGEALPA 594
+K E L LE+A VTPVHG++Y LAS+YYR G YYR L+++GC+ + P
Sbjct: 138 KKIIEELRDVLEEAGNVTPVHGKYYMLASQYYRRVGKHSDYYRCGLQFLGCSM--DEYPR 195
Query: 593 TERADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAFER 414
+ A AF L L+ +L VY++GELLAHPIL SL+GT NEW EL+KA + GD+ F
Sbjct: 196 DQWAQQAFFLGLAALLGDGVYNIGELLAHPILESLKGTENEWLMELLKAFNTGDINKFND 255
Query: 413 IRAK-SNCDELHKADRQLRQKIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELL 237
++ S +L + +LRQKI++LCLMEM F +S+ +R +SF +IA+E ++P EVELL
Sbjct: 256 MKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDIAQETKLPAKEVELL 315
Query: 236 IMKALAEKLIRGHIDQVRSCATVQWVRPXXXXXXXXXXXXXXVDAWREAVSAAADLL 66
IMKALA L+RG IDQV + WV+P +D W A++ L+
Sbjct: 316 IMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTWMGAITNMEKLM 372
>AE014297-3372|AAF56173.1| 382|Drosophila melanogaster CG10230-PA,
isoform A protein.
Length = 382
Score = 205 bits (500), Expect = 6e-53
Identities = 105/237 (44%), Positives = 146/237 (61%), Gaps = 1/237 (0%)
Frame = -1
Query: 773 EK*XEHLESTLEDADGVTPVHGRFYKLASEYYRVRGPTGRYYRAALRYVGCADGGEALPA 594
+K E L LE+A VTPVHG++Y LAS+YYR G YYR L+++GC+ + P
Sbjct: 138 KKIIEELRDVLEEAGNVTPVHGKYYMLASQYYRRVGKHSDYYRCGLQFLGCSM--DEYPR 195
Query: 593 TERADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAFER 414
+ A AF L L+ +L VY++GELLAHPIL SL+GT NEW EL+KA + GD+ F
Sbjct: 196 DQWAQQAFFLGLAALLGDGVYNIGELLAHPILESLKGTENEWLMELLKAFNTGDINKFND 255
Query: 413 IRAK-SNCDELHKADRQLRQKIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELL 237
++ S +L + +LRQKI++LCLMEM F +S+ +R +SF +IA+E ++P EVELL
Sbjct: 256 MKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDIAQETKLPAKEVELL 315
Query: 236 IMKALAEKLIRGHIDQVRSCATVQWVRPXXXXXXXXXXXXXXVDAWREAVSAAADLL 66
IMKALA L+RG IDQV + WV+P +D W A++ L+
Sbjct: 316 IMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTWMGAITNMEKLM 372
>BT024259-1|ABC86321.1| 119|Drosophila melanogaster IP15827p
protein.
Length = 119
Score = 56.0 bits (129), Expect = 6e-08
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = -1
Query: 365 LRQKIAILCLMEMAFNKSSSQRKLSFEEIAREARI---PLDEVELLIMKALAEKLIRGHI 195
++ I +L L+ ++ + EE++R A + P EVELLIMKALA L+RG I
Sbjct: 7 MKSVIILLALVAFCHAAPLDVKESTSEELSRPASLALSPAKEVELLIMKALALDLVRGEI 66
Query: 194 DQVRSCATVQWVRPXXXXXXXXXXXXXXVDAWREAVSAAADLL 66
DQV + WV+P +D W A++ L+
Sbjct: 67 DQVAGVVNMSWVQPRVLNRSQIVGMASTLDTWMGAITNMEKLM 109
>AY118924-1|AAM50784.1| 387|Drosophila melanogaster LD23767p
protein.
Length = 387
Score = 41.9 bits (94), Expect = 0.001
Identities = 26/104 (25%), Positives = 48/104 (46%)
Frame = -1
Query: 368 QLRQKIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIRGHIDQ 189
Q +K+ +L M++A S +++FE + +E +I DEVE +++ L KL+R +DQ
Sbjct: 273 QNMKKMRLLTFMQLA----ESSPEMTFETLTKELQINEDEVEPFVIEVLKTKLVRARLDQ 328
Query: 188 VRSCATVQWVRPXXXXXXXXXXXXXXVDAWREAVSAAADLLATV 57
+ + AW+E +S + L +V
Sbjct: 329 ANQKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSTVREGLTSV 372
>AE013599-1830|AAF58289.1| 387|Drosophila melanogaster CG8309-PA
protein.
Length = 387
Score = 41.9 bits (94), Expect = 0.001
Identities = 26/104 (25%), Positives = 48/104 (46%)
Frame = -1
Query: 368 QLRQKIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIRGHIDQ 189
Q +K+ +L M++A S +++FE + +E +I DEVE +++ L KL+R +DQ
Sbjct: 273 QNMKKMRLLTFMQLA----ESSPEMTFETLTKELQINEDEVEPFVIEVLKTKLVRARLDQ 328
Query: 188 VRSCATVQWVRPXXXXXXXXXXXXXXVDAWREAVSAAADLLATV 57
+ + AW+E +S + L +V
Sbjct: 329 ANQKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSTVREGLTSV 372
>BT012433-1|AAS93704.1| 256|Drosophila melanogaster RH63621p
protein.
Length = 256
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/119 (22%), Positives = 57/119 (47%)
Frame = -1
Query: 545 APDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAFERIRAKSNCDELHKADRQ 366
AP+V+ GELLA P + L+ P+ E + + G ++ RA+ ++ +
Sbjct: 45 APNVFVFGELLAEPSVLQLKDGPDSKHFETLNLFA---YGTYKEYRAQP--EKFIELTPA 99
Query: 365 LRQKIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIRGHIDQ 189
+++K+ L ++ +A S L E+ + + +E +I++A+ +I G + Q
Sbjct: 100 MQKKLQHLTIVSLAIKAKSIPYALLLSELEID---NVRHLEDIIIEAIYADIIHGKLFQ 155
>AE013599-643|AAF59097.2| 278|Drosophila melanogaster CG2038-PA
protein.
Length = 278
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/119 (22%), Positives = 57/119 (47%)
Frame = -1
Query: 545 APDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAFERIRAKSNCDELHKADRQ 366
AP+V+ GELLA P + L+ P+ E + + G ++ RA+ ++ +
Sbjct: 45 APNVFVFGELLAEPSVLQLKDGPDSKHFETLNLFA---YGTYKEYRAQP--EKFIELTPA 99
Query: 365 LRQKIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIRGHIDQ 189
+++K+ L ++ +A S L E+ + + +E +I++A+ +I G + Q
Sbjct: 100 MQKKLQHLTIVSLAIKAKSIPYALLLSELEID---NVRHLEDIIIEAIYADIIHGKLFQ 155
>AY094777-1|AAM11130.1| 195|Drosophila melanogaster LD04689p
protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AM294894-1|CAL26880.1| 195|Drosophila melanogaster CG6913 protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AM294893-1|CAL26879.1| 195|Drosophila melanogaster CG6913 protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AM294892-1|CAL26878.1| 195|Drosophila melanogaster CG6913 protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AM294891-1|CAL26877.1| 195|Drosophila melanogaster CG6913 protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AM294890-1|CAL26876.1| 195|Drosophila melanogaster CG6913 protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AM294889-1|CAL26875.1| 195|Drosophila melanogaster CG6913 protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AM294888-1|CAL26874.1| 195|Drosophila melanogaster CG6913 protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AM294887-1|CAL26873.1| 195|Drosophila melanogaster CG6913 protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AM294886-1|CAL26872.1| 195|Drosophila melanogaster CG6913 protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AM294885-1|CAL26871.1| 195|Drosophila melanogaster CG6913 protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AM294884-1|CAL26870.1| 195|Drosophila melanogaster CG6913 protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AM294883-1|CAL26869.1| 195|Drosophila melanogaster CG6913 protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AF517123-1|AAN04087.1| 195|Drosophila melanogaster N-TWIST basic
helix-loop-helixprotein protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AF369898-1|AAK72957.1| 195|Drosophila melanogaster Fer3-like
protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AE014297-1361|AAF54684.2| 195|Drosophila melanogaster CG6913-PA
protein.
Length = 195
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 512 PTIHPNHIHPEPALQRELV*RRYQH 586
P IHP+H+HP A QR+ Y H
Sbjct: 169 PAIHPHHLHPAAAYQRDFA-SPYNH 192
>AE014297-66|ABI31124.1| 81|Drosophila melanogaster CG41462-PA
protein.
Length = 81
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +2
Query: 593 WQVGPHPRRRTQRTEALRGSNGQWDHGLC--NIPRLTYKIV---RELESHHQHLRV 745
WQ PHPR R R R S+ C + T K+V RE E +HLR+
Sbjct: 4 WQGLPHPRSRIHRRYKPRPSHSMRQSEQCRRTMDSATAKVVARLREAEGQRRHLRL 59
>BT004883-1|AAO45239.1| 407|Drosophila melanogaster GH09439p
protein.
Length = 407
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 314 SSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIRGHIDQV 186
S ++FEE+ IP + E + + + E + GHIDQ+
Sbjct: 320 SKLYNNITFEELGALLDIPAVKAEKIASQMITEGRMNGHIDQI 362
>AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p
protein.
Length = 444
Score = 29.1 bits (62), Expect = 7.2
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = -1
Query: 458 LVKAVSVGDVGAFERIRAKSNCDELHKADRQLRQKIAILCL---MEMAFNKSSSQRKLSF 288
LV + D+ FE I + + + AD+ +R+ I L ++ + ++
Sbjct: 315 LVNSYQNNDINEFETILRQHRSNIM--ADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAI 372
Query: 287 EEIAREARIPLDEVELLIMKALAEKLIRGHIDQV 186
IA I EVE L++ + + I+G IDQV
Sbjct: 373 PFIANALNIEPAEVESLLVSCILDDTIKGRIDQV 406
>AF129082-1|AAD28607.1| 407|Drosophila melanogaster COP9
signalosome subunit 4 CSN4 protein.
Length = 407
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 314 SSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIRGHIDQV 186
S ++FEE+ IP + E + + + E + GHIDQ+
Sbjct: 320 SKLYNNITFEELGALLDIPAVKAEKIASQMITEGRMNGHIDQI 362
>AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9
signalosome subunit 2 CSN2 protein.
Length = 444
Score = 29.1 bits (62), Expect = 7.2
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = -1
Query: 458 LVKAVSVGDVGAFERIRAKSNCDELHKADRQLRQKIAILCL---MEMAFNKSSSQRKLSF 288
LV + D+ FE I + + + AD+ +R+ I L ++ + ++
Sbjct: 315 LVNSYQNNDINEFETILRQHRSNIM--ADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAI 372
Query: 287 EEIAREARIPLDEVELLIMKALAEKLIRGHIDQV 186
IA I EVE L++ + + I+G IDQV
Sbjct: 373 PFIANALNIEPAEVESLLVSCILDDTIKGRIDQV 406
>AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB,
isoform B protein.
Length = 444
Score = 29.1 bits (62), Expect = 7.2
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = -1
Query: 458 LVKAVSVGDVGAFERIRAKSNCDELHKADRQLRQKIAILCL---MEMAFNKSSSQRKLSF 288
LV + D+ FE I + + + AD+ +R+ I L ++ + ++
Sbjct: 315 LVNSYQNNDINEFETILRQHRSNIM--ADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAI 372
Query: 287 EEIAREARIPLDEVELLIMKALAEKLIRGHIDQV 186
IA I EVE L++ + + I+G IDQV
Sbjct: 373 PFIANALNIEPAEVESLLVSCILDDTIKGRIDQV 406
>AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA,
isoform A protein.
Length = 444
Score = 29.1 bits (62), Expect = 7.2
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = -1
Query: 458 LVKAVSVGDVGAFERIRAKSNCDELHKADRQLRQKIAILCL---MEMAFNKSSSQRKLSF 288
LV + D+ FE I + + + AD+ +R+ I L ++ + ++
Sbjct: 315 LVNSYQNNDINEFETILRQHRSNIM--ADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAI 372
Query: 287 EEIAREARIPLDEVELLIMKALAEKLIRGHIDQV 186
IA I EVE L++ + + I+G IDQV
Sbjct: 373 PFIANALNIEPAEVESLLVSCILDDTIKGRIDQV 406
>AE013599-559|AAF59157.1| 407|Drosophila melanogaster CG8725-PA
protein.
Length = 407
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 314 SSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIRGHIDQV 186
S ++FEE+ IP + E + + + E + GHIDQ+
Sbjct: 320 SKLYNNITFEELGALLDIPAVKAEKIASQMITEGRMNGHIDQI 362
>X67239-1|CAA47664.1| 1077|Drosophila melanogaster hairless protein.
Length = 1077
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 505 G*ANNSPKSYTSGASTPERASLKAISARSVAGRASPPSAHP 627
G NN +SG + +R+ K S S AG+ASP + P
Sbjct: 591 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 631
>M95192-1|AAA28607.1| 1059|Drosophila melanogaster hairless protein
protein.
Length = 1059
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 505 G*ANNSPKSYTSGASTPERASLKAISARSVAGRASPPSAHP 627
G NN +SG + +R+ K S S AG+ASP + P
Sbjct: 573 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 613
>BT015220-1|AAT94449.1| 1077|Drosophila melanogaster RE41617p
protein.
Length = 1077
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 505 G*ANNSPKSYTSGASTPERASLKAISARSVAGRASPPSAHP 627
G NN +SG + +R+ K S S AG+ASP + P
Sbjct: 591 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 631
>AY051806-1|AAK93230.1| 619|Drosophila melanogaster LD32021p
protein.
Length = 619
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 505 G*ANNSPKSYTSGASTPERASLKAISARSVAGRASPPSAHP 627
G NN +SG + +R+ K S S AG+ASP + P
Sbjct: 133 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 173
>AE014297-2832|AAN14358.1| 1059|Drosophila melanogaster CG5460-PC,
isoform C protein.
Length = 1059
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 505 G*ANNSPKSYTSGASTPERASLKAISARSVAGRASPPSAHP 627
G NN +SG + +R+ K S S AG+ASP + P
Sbjct: 573 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 613
>AE014297-2831|AAF55791.1| 1059|Drosophila melanogaster CG5460-PB,
isoform B protein.
Length = 1059
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 505 G*ANNSPKSYTSGASTPERASLKAISARSVAGRASPPSAHP 627
G NN +SG + +R+ K S S AG+ASP + P
Sbjct: 573 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 613
>AE014297-2830|AAN14357.1| 1077|Drosophila melanogaster CG5460-PD,
isoform D protein.
Length = 1077
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 505 G*ANNSPKSYTSGASTPERASLKAISARSVAGRASPPSAHP 627
G NN +SG + +R+ K S S AG+ASP + P
Sbjct: 591 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 631
>AE014297-2829|AAF55790.1| 1077|Drosophila melanogaster CG5460-PA,
isoform A protein.
Length = 1077
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 505 G*ANNSPKSYTSGASTPERASLKAISARSVAGRASPPSAHP 627
G NN +SG + +R+ K S S AG+ASP + P
Sbjct: 591 GCVNNGSGGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAP 631
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,412,352
Number of Sequences: 53049
Number of extensions: 798350
Number of successful extensions: 2712
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2701
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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