Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16c08
(758 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450 ... 25 0.50
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 24 1.1
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 24 1.5
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 24 1.5
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 24 1.5
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 24 1.5
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 23 2.6
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 23 2.6
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 22 4.6
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 21 8.1
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 21 8.1
>AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 463
Score = 25.4 bits (53), Expect = 0.50
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -1
Query: 758 WPIIIQKKAYVNTLVD-YRKWLYIFPNTN-VSVHYYCKDALVQVNTKVLPGVGVM-FSTM 588
WP ++QKK + D YR+ FP V +++ L+ + +++ +GV F +
Sbjct: 2 WPFVVQKKHITEIIADIYRQ----FPTDRYVGYYHFMTPTLLLRDVELIKQIGVKEFDSF 57
Query: 587 EQTCSIGITH 558
S+ T+
Sbjct: 58 HDHVSVSNTN 67
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -1
Query: 554 VTITVDSRFYVSHSTTYWPKKKFNFNNYIDQNMLLEKATTASF 426
+ +T + R+Y +T ++ + F+N++ Q+ L K + A+F
Sbjct: 285 LVLTYEMRWYCQTATMEEKQELYEFSNFVSQH--LPKFSAANF 325
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 188 IKKRCHQSNNVTVQYKNNDEFVTICNNLENN-RAYINLT 75
I+ RC +SN ++ + D+F NN + Y N+T
Sbjct: 75 IQIRCIESNMISFYLEATDDFAYFLEVSNNNFKTYSNVT 113
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 49 ISSLSSYSLVKLMYARLFSKLLQIVTNSSLFLYCT 153
++ L + + L ++F+K L ++ + LF YC+
Sbjct: 77 VTILGATFVTVLQLHKIFAKGLNVIEANRLFFYCS 111
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 49 ISSLSSYSLVKLMYARLFSKLLQIVTNSSLFLYCT 153
++ L + + L ++F+K L ++ + LF YC+
Sbjct: 77 VTILGATFVTVLQLHKIFAKGLNVIEANRLFFYCS 111
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 49 ISSLSSYSLVKLMYARLFSKLLQIVTNSSLFLYCT 153
++ L + + L ++F+K L ++ + LF YC+
Sbjct: 77 VTILGATFVTVLQLHKIFAKGLNVIEANRLFFYCS 111
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = +3
Query: 594 RKHNTNAGQNFCINLYKRVFTIIVDGHVRVWKNVQPFSVVY 716
R H C + R + ++ GH+R +PFS Y
Sbjct: 2 RTHTLPCKCTICPKAFSRPW--LLQGHIRTHTGEKPFSCTY 40
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 412 TILPVLFYCNFLINFTLKI 356
T+L YCNF+I F L +
Sbjct: 314 TVLKTNKYCNFIILFYLSV 332
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 223 YSVVYCYFCFAV*KNGVINQI 161
+S YCY+ + K+GV N +
Sbjct: 270 FSFCYCYYNSKMTKDGVYNTL 290
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 463 KICCLKKQPPP 431
KI CLK PPP
Sbjct: 30 KISCLKTTPPP 40
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 482 FNNYIDQNMLL 450
FNNY+D+N L
Sbjct: 17 FNNYMDENQAL 27
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 482 FNNYIDQNMLL 450
FNNY+D+N L
Sbjct: 37 FNNYMDENQAL 47
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,456
Number of Sequences: 336
Number of extensions: 3919
Number of successful extensions: 27
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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