Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16c04
(360 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41424 Cluster: Uncharacterized 12.2 kDa protein in EGT... 184 5e-46
UniRef50_O10279 Cluster: Uncharacterized 11.6 kDa protein; n=7; ... 75 5e-13
UniRef50_Q6PZ56 Cluster: Putative uncharacterized protein; n=1; ... 51 5e-06
UniRef50_Q80LK5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.023
UniRef50_Q0N3Y7 Cluster: Ac19-like protein; n=1; Clanis bilineat... 37 0.092
UniRef50_Q0TT26 Cluster: Putative uncharacterized protein; n=1; ... 35 0.49
UniRef50_Q54PF2 Cluster: Putative uncharacterized protein; n=1; ... 34 0.65
UniRef50_A2WNA6 Cluster: Putative uncharacterized protein; n=4; ... 33 2.0
UniRef50_Q26ES2 Cluster: Outer membrane protein; n=2; Flavobacte... 32 3.5
UniRef50_Q8ILS3 Cluster: Putative uncharacterized protein; n=2; ... 32 3.5
UniRef50_P12828 Cluster: Early 40.9 kDa protein; n=5; Nucleopoly... 32 3.5
UniRef50_Q8D345 Cluster: Tig protein; n=1; Wigglesworthia glossi... 31 4.6
UniRef50_A2FV30 Cluster: Putative uncharacterized protein; n=1; ... 31 6.1
UniRef50_A0Q3D9 Cluster: Uncharacterized protein with repeats; n... 31 8.0
UniRef50_Q8IL74 Cluster: Putative uncharacterized protein; n=1; ... 31 8.0
UniRef50_Q5CEM3 Cluster: Putative uncharacterized protein; n=2; ... 31 8.0
UniRef50_Q54L62 Cluster: Putative uncharacterized protein; n=1; ... 31 8.0
UniRef50_Q4U9S5 Cluster: Phosphatidylinositol 4-kinase, putative... 31 8.0
UniRef50_Q24GS5 Cluster: Putative uncharacterized protein; n=1; ... 31 8.0
>UniRef50_P41424 Cluster: Uncharacterized 12.2 kDa protein in
EGT-IAP1 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 12.2 kDa
protein in EGT-IAP1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 108
Score = 184 bits (447), Expect = 5e-46
Identities = 89/99 (89%), Positives = 93/99 (93%)
Frame = -1
Query: 315 MNSGDDDATRLHYSNAHAKQTLATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLI 136
MNSGD ATRLH SNAHAKQTLATLFANRNHSSFYEYAI FVSTLLFKNNLNLM ACNLI
Sbjct: 1 MNSGD--ATRLHCSNAHAKQTLATLFANRNHSSFYEYAIAFVSTLLFKNNLNLMTACNLI 58
Query: 135 NTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKMLT 19
N+LINFE+N+FGKSLLL+ FVNFCIANSDGVTIQHKMLT
Sbjct: 59 NSLINFELNMFGKSLLLNGFVNFCIANSDGVTIQHKMLT 97
>UniRef50_O10279 Cluster: Uncharacterized 11.6 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 11.6 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 104
Score = 74.5 bits (175), Expect = 5e-13
Identities = 36/93 (38%), Positives = 57/93 (61%)
Frame = -1
Query: 294 ATRLHYSNAHAKQTLATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFE 115
+TRL ++NA A+Q + L A H + E A+ FV + + N+L+ NL + ++ E
Sbjct: 3 STRLTWTNARAQQAILALAAT-GHGVYCERAVAFVISAITNNSLSWPTLLNLFDLVVAVE 61
Query: 114 INVFGKSLLLSKFVNFCIANSDGVTIQHKMLTQ 16
N+F KS L+ VNFC+AN DG T+QH++L +
Sbjct: 62 RNLFKKSWALNALVNFCVANGDGFTVQHQLLNK 94
>UniRef50_Q6PZ56 Cluster: Putative uncharacterized protein; n=1;
Anticarsia gemmatalis MNPV|Rep: Putative uncharacterized
protein - Anticarsia gemmatalis MNPV
Length = 111
Score = 51.2 bits (117), Expect = 5e-06
Identities = 25/68 (36%), Positives = 37/68 (54%)
Frame = -1
Query: 240 FANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCI 61
FA +H + E AI F + N + +L + ++ E NVF KSL+L+ VNFCI
Sbjct: 8 FAMASHDVYCERAIAFAIKTVTGNMVTWPTLLHLFDFIVTLERNVFNKSLVLNGLVNFCI 67
Query: 60 ANSDGVTI 37
+ DG T+
Sbjct: 68 VHGDGYTV 75
>UniRef50_Q80LK5 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 119
Score = 39.1 bits (87), Expect = 0.023
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = -1
Query: 168 NLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKMLTQ 16
NL L N++N +I E V KS++L+ VNF I +SDGV+ Q + T+
Sbjct: 52 NLELTKCKNILNIIIKTEQLVRNKSVVLNLIVNFLIRHSDGVSFQCMLNTK 102
>UniRef50_Q0N3Y7 Cluster: Ac19-like protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: Ac19-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 125
Score = 37.1 bits (82), Expect = 0.092
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = -1
Query: 216 FYEYAITFVSTLL--FKNN-LNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIANSDG 46
FY T L F NN L L L++++I E +F +SLLL V F I NSDG
Sbjct: 43 FYTICYTVARKYLHQFNNNVLALNTIQTLLDSIIQAEQMLFSRSLLLDFCVRFLINNSDG 102
Query: 45 VTIQHKMLTQ 16
+Q + TQ
Sbjct: 103 QNLQCLINTQ 112
>UniRef50_Q0TT26 Cluster: Putative uncharacterized protein; n=1;
Clostridium perfringens ATCC 13124|Rep: Putative
uncharacterized protein - Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A)
Length = 164
Score = 34.7 bits (76), Expect = 0.49
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 201 ITFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIAN 55
++FVS LLFK + ++A L N +INF F + L+ FV F N
Sbjct: 100 MSFVSALLFKGFNSELIANWLQNIVINFPFAFFTQLFLIQPFVRFVFRN 148
>UniRef50_Q54PF2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 542
Score = 34.3 bits (75), Expect = 0.65
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = -1
Query: 351 TPRFS*FNKRSIMNSGDDDATRLHYSNAHAK-QTLATLFANRNHSSF-YEYAITFVSTLL 178
+P FS FNK S ++ G DD+ LH + +K T T N +SF Y + T +
Sbjct: 229 SPTFSNFNKHSQVSRGFDDSQPLHRNTFISKPTTTTTTTTTTNTNSFNYNNSNNNTQTKI 288
Query: 177 FKNNLNLMVACNLINTLINFEINVFGKSLLLSK 79
KN N N N N N + KS L K
Sbjct: 289 NKNQSN-NTYNNNNNNNNNNNNNNYNKSKLFEK 320
>UniRef50_A2WNA6 Cluster: Putative uncharacterized protein; n=4; Oryza
sativa|Rep: Putative uncharacterized protein - Oryza
sativa subsp. indica (Rice)
Length = 1026
Score = 32.7 bits (71), Expect = 2.0
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 62 MQKLTNLLSNKLLPNTLISKLINVLIKLHATIKFKLFLKSNVLTNV 199
+ L+NL+ L N L S+L+ +L KLH+ + KL++ S + T +
Sbjct: 869 ISSLSNLVRLSLRENYLESELVKILGKLHSLLSLKLYVNSYLGTEL 914
>UniRef50_Q26ES2 Cluster: Outer membrane protein; n=2;
Flavobacteria|Rep: Outer membrane protein -
Flavobacteria bacterium BBFL7
Length = 823
Score = 31.9 bits (69), Expect = 3.5
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = -1
Query: 345 RFS*FNKRSIMNSGDDDATRLHYSN--AHAKQTLATLFANRNHSSFYE 208
RF+ N+RS+ SG +++ SN + + TL++L RN++ FYE
Sbjct: 502 RFNRTNRRSLRLSGGTAVQQINNSNPISTMENTLSSLLFERNYAKFYE 549
>UniRef50_Q8ILS3 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1124
Score = 31.9 bits (69), Expect = 3.5
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -1
Query: 261 KQTLATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVAC-NLINTLINFEINVFGKSLLL 85
+ LA + + N S+ Y Y +L+KN +N + C N N +I E K
Sbjct: 554 QMVLANILIHFNISNRYVYFHNVNDYILYKNYINKLTTCTNKENKIIQIEEKTMNKDKEE 613
Query: 84 SKFVNFCIANSDGVTIQHKMLTQ 16
S ++N+ +S ++H+ Q
Sbjct: 614 SIYLNYKNKDSTKEMVKHEKNNQ 636
>UniRef50_P12828 Cluster: Early 40.9 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Early 40.9 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 353
Score = 31.9 bits (69), Expect = 3.5
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 317 MERLLNQLNLGVLP 358
MERLLNQLNLGVLP
Sbjct: 1 MERLLNQLNLGVLP 14
>UniRef50_Q8D345 Cluster: Tig protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
Tig protein - Wigglesworthia glossinidia brevipalpis
Length = 435
Score = 31.5 bits (68), Expect = 4.6
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2
Query: 47 PSLLAMQKLTNLLSNKLLPNTLISKLINVLIKLHATIKFKLFLKS 181
PS+L ++ N LS L N INVL LH++IK KL K+
Sbjct: 301 PSILFENEIKNFLSTNLNCNLNDFSKINVLSLLHSSIKNKLINKT 345
>UniRef50_A2FV30 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 440
Score = 31.1 bits (67), Expect = 6.1
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = -1
Query: 345 RFS*FNKRSIMNSGDDDATRLHYSNAHAKQTLATLFA-NRNHSSFYEYAITFVSTLLFKN 169
RFS N I+ D + ++ +N T+ F NRN T + L+ K+
Sbjct: 93 RFSIENNYEILQFMDSNGFSINKTNTRTGYTILNNFIKNRN--------FTAIEILMKKD 144
Query: 168 NLNLMVACN--LINTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKML 22
LN + + + LI E + F L K VNF N +G+ I HK++
Sbjct: 145 LLNNSIKSDKDFLFKLIECEYSDFYDKLFSMKEVNFNSPNENGLYIVHKIV 195
>UniRef50_A0Q3D9 Cluster: Uncharacterized protein with repeats; n=2;
Clostridium|Rep: Uncharacterized protein with repeats -
Clostridium novyi (strain NT)
Length = 836
Score = 30.7 bits (66), Expect = 8.0
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = -1
Query: 276 SNAHAKQTLATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFE----IN 109
+N ++ LF + N S E IT + LF NNL + LIN+ I +N
Sbjct: 85 NNMELTNSIQKLFNDLNIQSINEKTITLLVKSLFSNNLLPKFSDTLINSSIETSLIDILN 144
Query: 108 V---FGKSLLLSKFVNFCI 61
+ F KS+ ++K NF I
Sbjct: 145 LYMCFEKSINITKLKNFSI 163
>UniRef50_Q8IL74 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1076
Score = 30.7 bits (66), Expect = 8.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -1
Query: 288 RLHYSNAHAKQTLATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFE 115
R+ + N H K N N+ +Y + + KN++N++ N+IN L N E
Sbjct: 118 RMKFINLHMKMNSRKSQTNMNYDMMQQYYNLYSTCNDNKNSMNVINGMNIINGLNNME 175
>UniRef50_Q5CEM3 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 818
Score = 30.7 bits (66), Expect = 8.0
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -1
Query: 222 SSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSLL 88
SS Y Y T L++K LN A N IN +NF +N KS L
Sbjct: 45 SSLYGYNNTEGDLLIYKRPLNRSQALNNINLCLNFILNPPEKSKL 89
>UniRef50_Q54L62 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1574
Score = 30.7 bits (66), Expect = 8.0
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = -1
Query: 249 ATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLI 124
++L ++ N SF Y+ +F S L KN+L +++ C++I +I
Sbjct: 1506 SSLLSSSNSKSF-NYSQSFQSNNLSKNDLIILIVCSIIGVII 1546
>UniRef50_Q4U9S5 Cluster: Phosphatidylinositol 4-kinase, putative;
n=2; Theileria|Rep: Phosphatidylinositol 4-kinase,
putative - Theileria annulata
Length = 1194
Score = 30.7 bits (66), Expect = 8.0
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -1
Query: 228 NHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSLLLSKFVN 70
N S Y F+S +LFKNN +L + +T F+ ++L++ F+N
Sbjct: 220 NTSFGYVRLCNFISKVLFKNNKDLGTLVSRASTWSRFDTKYIKETLIVLLFIN 272
>UniRef50_Q24GS5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 671
Score = 30.7 bits (66), Expect = 8.0
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 26 ILC*IVTPSLLAMQKLTNLLSNKLLPNTL-ISKLINVLIKLHATIKFKLFLKSNVLTNVM 202
ILC I LL ++ + NK L + + K +N++ K+ +IKF LF+ + V+
Sbjct: 353 ILCLIYGLELLVIETWIGFIYNKYLWGLIFMRKKVNLIWKIIYSIKFILFVACITSSFVL 412
Query: 203 AYS*KLL*LRLANKVASVCF 262
AY N+++ CF
Sbjct: 413 AYLYNKEYNFFQNQISESCF 432
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,858,673
Number of Sequences: 1657284
Number of extensions: 4682309
Number of successful extensions: 12463
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12458
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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