Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16b22
(468 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24 pro... 205 5e-53
U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24 pro... 205 5e-53
M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24 pro... 205 5e-53
BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24 p... 205 5e-53
BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24 p... 205 5e-53
AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24 p... 205 5e-53
AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24 p... 205 5e-53
BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein pr... 204 2e-52
BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein. 35 0.16
Z98886-1|CAI22750.1| 411|Homo sapiens adherens junction associa... 31 1.5
AY282806-1|AAP35025.1| 411|Homo sapiens transmembrane protein S... 31 1.5
AL391808-1|CAH72438.1| 411|Homo sapiens adherens junction assoc... 31 1.5
AL023586-1|CAI20566.1| 411|Homo sapiens adherens junction assoc... 31 1.5
AF175409-1|AAD53278.1| 411|Homo sapiens unknown protein. 31 1.5
Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II pro... 31 2.6
X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II prot... 31 2.6
BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for IM... 31 2.6
AK000295-1|BAA91063.1| 686|Homo sapiens protein ( Homo sapiens ... 31 2.6
AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta p... 31 2.6
AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II be... 31 2.6
AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, b... 31 2.6
BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat tra... 30 3.5
BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat tra... 30 3.5
AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat tra... 30 3.5
AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein. 30 3.5
AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. 30 3.5
AB231746-1|BAE17134.1| 567|Homo sapiens hypothetical protein pr... 30 4.6
AB231747-1|BAE17135.1| 490|Homo sapiens hypothetical protein pr... 29 6.1
BC127700-1|AAI27701.1| 520|Homo sapiens INSC protein protein. 29 8.0
AK025859-1|BAB15260.1| 460|Homo sapiens protein ( Homo sapiens ... 29 8.0
AB236159-1|BAE93464.1| 579|Homo sapiens Inscuteable long form p... 29 8.0
AB236158-1|BAE93463.1| 532|Homo sapiens Inscuteable short form ... 29 8.0
AB231745-1|BAE17133.1| 532|Homo sapiens hypothetical protein pr... 29 8.0
>U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 205 bits (501), Expect = 5e-53
Identities = 95/113 (84%), Positives = 103/113 (91%)
Frame = -3
Query: 391 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 212
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 211 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 53
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKK
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKK 116
>U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 205 bits (501), Expect = 5e-53
Identities = 95/113 (84%), Positives = 103/113 (91%)
Frame = -3
Query: 391 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 212
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 211 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 53
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKK
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKK 116
>M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 205 bits (501), Expect = 5e-53
Identities = 95/113 (84%), Positives = 103/113 (91%)
Frame = -3
Query: 391 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 212
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 211 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 53
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKK
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKK 116
>BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 205 bits (501), Expect = 5e-53
Identities = 95/113 (84%), Positives = 103/113 (91%)
Frame = -3
Query: 391 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 212
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 211 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 53
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKK
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKK 116
>BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 205 bits (501), Expect = 5e-53
Identities = 95/113 (84%), Positives = 103/113 (91%)
Frame = -3
Query: 391 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 212
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 211 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 53
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKK
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKK 116
>AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 205 bits (501), Expect = 5e-53
Identities = 95/113 (84%), Positives = 103/113 (91%)
Frame = -3
Query: 391 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 212
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 211 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 53
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKK
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKK 116
>AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 205 bits (501), Expect = 5e-53
Identities = 95/113 (84%), Positives = 103/113 (91%)
Frame = -3
Query: 391 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 212
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 211 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 53
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKK
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKK 116
>BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein
protein.
Length = 132
Score = 204 bits (497), Expect = 2e-52
Identities = 94/113 (83%), Positives = 103/113 (91%)
Frame = -3
Query: 391 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 212
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 211 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 53
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +R+QRKERKNRMKK
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSREQRKERKNRMKK 116
>BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein.
Length = 1500
Score = 34.7 bits (76), Expect = 0.16
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -3
Query: 184 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 53
+++ + LDL K E RLA EKK+ +K++K++K + KK
Sbjct: 1457 SILLEELDLEKLREESRRLALAAKREKKKKKKKKKKKKKKKKKK 1500
>Z98886-1|CAI22750.1| 411|Homo sapiens adherens junction associated
protein 1 protein.
Length = 411
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 164 RSGQEVRTQAQVSSPRPVREEEAHAQ 87
RSGQ R A V SPRP R E H Q
Sbjct: 67 RSGQPARVPAPVWSPRPPRVERIHGQ 92
>AY282806-1|AAP35025.1| 411|Homo sapiens transmembrane protein
SHREW1 protein.
Length = 411
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 164 RSGQEVRTQAQVSSPRPVREEEAHAQ 87
RSGQ R A V SPRP R E H Q
Sbjct: 67 RSGQPARVPAPVWSPRPPRVERIHGQ 92
>AL391808-1|CAH72438.1| 411|Homo sapiens adherens junction
associated protein 1 protein.
Length = 411
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 164 RSGQEVRTQAQVSSPRPVREEEAHAQ 87
RSGQ R A V SPRP R E H Q
Sbjct: 67 RSGQPARVPAPVWSPRPPRVERIHGQ 92
>AL023586-1|CAI20566.1| 411|Homo sapiens adherens junction
associated protein 1 protein.
Length = 411
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 164 RSGQEVRTQAQVSSPRPVREEEAHAQ 87
RSGQ R A V SPRP R E H Q
Sbjct: 67 RSGQPARVPAPVWSPRPPRVERIHGQ 92
>AF175409-1|AAD53278.1| 411|Homo sapiens unknown protein.
Length = 411
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 164 RSGQEVRTQAQVSSPRPVREEEAHAQ 87
RSGQ R A V SPRP R E H Q
Sbjct: 67 RSGQPARVPAPVWSPRPPRVERIHGQ 92
>Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II
protein.
Length = 1031
Score = 30.7 bits (66), Expect = 2.6
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Frame = -3
Query: 301 TVSKTEIREKLAKMYKVTPDVVFV-FGFKTNFGGG--KSTGFALIYDTLDLAKKFEPKHR 131
T K + +KL K K D V F F G + G + ++ + K +PK
Sbjct: 652 TAMKADASKKLLKKKKGDLDTAAVKVEFDEEFSGAPVEGAGEEALTPSVPINKGPKPKRE 711
Query: 130 LARHGLYEKKRPTRKQRKERKNRMKKGPW 44
G +K PT + K K+ PW
Sbjct: 712 KKEPGTRVRKTPTSSGKPSAKKVKKRNPW 740
>X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II protein.
Length = 1621
Score = 30.7 bits (66), Expect = 2.6
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Frame = -3
Query: 301 TVSKTEIREKLAKMYKVTPDVVFV-FGFKTNFGGG--KSTGFALIYDTLDLAKKFEPKHR 131
T K + +KL K K D V F F G + G + ++ + K +PK
Sbjct: 1242 TAMKADASKKLLKKKKGDLDTAAVKVEFDEEFSGAPVEGAGEEALTPSVPINKGPKPKRE 1301
Query: 130 LARHGLYEKKRPTRKQRKERKNRMKKGPW 44
G +K PT + K K+ PW
Sbjct: 1302 KKEPGTRVRKTPTSSGKPSAKKVKKRNPW 1330
>BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for
IMAGE:4999541) protein.
Length = 485
Score = 30.7 bits (66), Expect = 2.6
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Frame = -3
Query: 301 TVSKTEIREKLAKMYKVTPDVVFV-FGFKTNFGGG--KSTGFALIYDTLDLAKKFEPKHR 131
T K + +KL K K D V F F G + G + ++ + K +PK
Sbjct: 106 TAMKADASKKLLKKKKGDLDTAAVKVEFDEEFSGAPVEGAGEEALTPSVPINKGPKPKRE 165
Query: 130 LARHGLYEKKRPTRKQRKERKNRMKKGPW 44
G +K PT + K K+ PW
Sbjct: 166 KKEPGTRVRKTPTSSGKPSAKKVKKRNPW 194
>AK000295-1|BAA91063.1| 686|Homo sapiens protein ( Homo sapiens
cDNA FLJ20288 fis, clone HEP04414. ).
Length = 686
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 184 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 53
+++ LDL K E + A EK++ RK++K++K + KK
Sbjct: 640 SILLKELDLEKSREESRKQALAAKREKRKEKRKKKKKKKKKKKK 683
>AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta
protein.
Length = 717
Score = 30.7 bits (66), Expect = 2.6
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Frame = -3
Query: 301 TVSKTEIREKLAKMYKVTPDVVFV-FGFKTNFGGG--KSTGFALIYDTLDLAKKFEPKHR 131
T K + +KL K K D V F F G + G + ++ + K +PK
Sbjct: 338 TAMKADASKKLLKKKKGDLDTAAVKVEFDEEFSGAPVEGAGEEALTPSVPINKGPKPKRE 397
Query: 130 LARHGLYEKKRPTRKQRKERKNRMKKGPW 44
G +K PT + K K+ PW
Sbjct: 398 KKEPGTRVRKTPTSSGKPSAKKVKKRNPW 426
>AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II beta
protein.
Length = 1598
Score = 30.7 bits (66), Expect = 2.6
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Frame = -3
Query: 301 TVSKTEIREKLAKMYKVTPDVVFV-FGFKTNFGGG--KSTGFALIYDTLDLAKKFEPKHR 131
T K + +KL K K D V F F G + G + ++ + K +PK
Sbjct: 1219 TAMKADASKKLLKKKKGDLDTAAVKVEFDEEFSGAPVEGAGEEALTPSVPINKGPKPKRE 1278
Query: 130 LARHGLYEKKRPTRKQRKERKNRMKKGPW 44
G +K PT + K K+ PW
Sbjct: 1279 KKEPGTRVRKTPTSSGKPSAKKVKKRNPW 1307
>AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, beta
isozyme variant protein.
Length = 1009
Score = 30.7 bits (66), Expect = 2.6
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Frame = -3
Query: 301 TVSKTEIREKLAKMYKVTPDVVFV-FGFKTNFGGG--KSTGFALIYDTLDLAKKFEPKHR 131
T K + +KL K K D V F F G + G + ++ + K +PK
Sbjct: 630 TAMKADASKKLLKKKKGDLDTAAVKVEFDEEFSGAPVEGAGEEALTPSVPINKGPKPKRE 689
Query: 130 LARHGLYEKKRPTRKQRKERKNRMKKGPW 44
G +K PT + K K+ PW
Sbjct: 690 KKEPGTRVRKTPTSSGKPSAKKVKKRNPW 718
>BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 30.3 bits (65), Expect = 3.5
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 180 KANPVDLPPPKFVLKPNTNTTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 356
K + L K PNT T + L L SF+++S L F G + QT+ LR+N+L
Sbjct: 110 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 169
Query: 357 LVMNLRV 377
+ +R+
Sbjct: 170 RTIPVRL 176
>BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 30.3 bits (65), Expect = 3.5
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 180 KANPVDLPPPKFVLKPNTNTTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 356
K + L K PNT T + L L SF+++S L F G + QT+ LR+N+L
Sbjct: 110 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 169
Query: 357 LVMNLRV 377
+ +R+
Sbjct: 170 RTIPVRL 176
>AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat
transmembrane neuronal 2 protein protein.
Length = 516
Score = 30.3 bits (65), Expect = 3.5
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 180 KANPVDLPPPKFVLKPNTNTTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 356
K + L K PNT T + L L SF+++S L F G + QT+ LR+N+L
Sbjct: 110 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 169
Query: 357 LVMNLRV 377
+ +R+
Sbjct: 170 RTIPVRL 176
>AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein.
Length = 2486
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 184 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 62
+++ + LDL K E RLA EK++ R+++KE + R
Sbjct: 1340 SILLEELDLEKLREESRRLALAAKREKRKEKRRKKKEEQRR 1380
>AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein.
Length = 529
Score = 30.3 bits (65), Expect = 3.5
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 180 KANPVDLPPPKFVLKPNTNTTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 356
K + L K PNT T + L L SF+++S L F G + QT+ LR+N+L
Sbjct: 123 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 182
Query: 357 LVMNLRV 377
+ +R+
Sbjct: 183 RTIPVRL 189
>AB231746-1|BAE17134.1| 567|Homo sapiens hypothetical protein
protein.
Length = 567
Score = 29.9 bits (64), Expect = 4.6
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +2
Query: 56 LHSVLTFFTLFARGPLLLVQAVAS*PVLGFELLGQIECVVDQSESS*LATSEVCLETEYE 235
+HS+ T AR + AV+ + +G+IE ++ + S A +E CL+ E E
Sbjct: 103 VHSMSVRLTCHARSMVSEYSAVSR---NSLKEMGEIEKLLMEKCSELSAVTERCLQVENE 159
Query: 236 HYIGSNLVHFGELLTDLG 289
H + S E L+ LG
Sbjct: 160 HVLKSTKACVSETLSMLG 177
>AB231747-1|BAE17135.1| 490|Homo sapiens hypothetical protein
protein.
Length = 490
Score = 29.5 bits (63), Expect = 6.1
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +2
Query: 56 LHSVLTFFTLFARGPLLLVQAVAS*PVLGFELLGQIECVVDQSESS*LATSEVCLETEYE 235
+HS+ T AR + AV+ + +G+IE ++ + S A +E CL+ E E
Sbjct: 103 VHSMSVRLTCHARSMVSEYSAVSR---NSLKEMGEIEKLLMEKCSELSAVTERCLQVENE 159
Query: 236 HYIGSNLVHFGELLTDLG 289
H + S E L+ LG
Sbjct: 160 HVLKSMKACMSETLSMLG 177
>BC127700-1|AAI27701.1| 520|Homo sapiens INSC protein protein.
Length = 520
Score = 29.1 bits (62), Expect = 8.0
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +2
Query: 56 LHSVLTFFTLFARGPLLLVQAVAS*PVLGFELLGQIECVVDQSESS*LATSEVCLETEYE 235
+HS+ T AR + AV+ + +G+IE ++ + S A +E CL+ E E
Sbjct: 103 VHSMSVRLTCHARSMVSEYSAVSR---NSLKEMGEIEKLLMEKCSELSAVTERCLQVENE 159
Query: 236 HYIGSNLVHFGELLTDLG 289
H + S E L+ LG
Sbjct: 160 HVLKSMKACVSETLSMLG 177
>AK025859-1|BAB15260.1| 460|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22206 fis, clone HRC01431. ).
Length = 460
Score = 29.1 bits (62), Expect = 8.0
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -3
Query: 184 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERK 68
+++ + LDL K E RLA EK++ R+++K++K
Sbjct: 421 SILLEELDLEKLREESRRLALAAKREKRKEKRRKKKKKK 459
>AB236159-1|BAE93464.1| 579|Homo sapiens Inscuteable long form
protein.
Length = 579
Score = 29.1 bits (62), Expect = 8.0
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +2
Query: 56 LHSVLTFFTLFARGPLLLVQAVAS*PVLGFELLGQIECVVDQSESS*LATSEVCLETEYE 235
+HS+ T AR + AV+ + +G+IE ++ + S A +E CL+ E E
Sbjct: 150 VHSMSVRLTCHARSMVSEYSAVSR---NSLKEMGEIEKLLMEKCSELSAVTERCLQVENE 206
Query: 236 HYIGSNLVHFGELLTDLG 289
H + S E L+ LG
Sbjct: 207 HVLKSMKACVSETLSMLG 224
>AB236158-1|BAE93463.1| 532|Homo sapiens Inscuteable short form
protein.
Length = 532
Score = 29.1 bits (62), Expect = 8.0
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +2
Query: 56 LHSVLTFFTLFARGPLLLVQAVAS*PVLGFELLGQIECVVDQSESS*LATSEVCLETEYE 235
+HS+ T AR + AV+ + +G+IE ++ + S A +E CL+ E E
Sbjct: 103 VHSMSVRLTCHARSMVSEYSAVSR---NSLKEMGEIEKLLMEKCSELSAVTERCLQVENE 159
Query: 236 HYIGSNLVHFGELLTDLG 289
H + S E L+ LG
Sbjct: 160 HVLKSMKACVSETLSMLG 177
>AB231745-1|BAE17133.1| 532|Homo sapiens hypothetical protein
protein.
Length = 532
Score = 29.1 bits (62), Expect = 8.0
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +2
Query: 56 LHSVLTFFTLFARGPLLLVQAVAS*PVLGFELLGQIECVVDQSESS*LATSEVCLETEYE 235
+HS+ T AR + AV+ + +G+IE ++ + S A +E CL+ E E
Sbjct: 103 VHSMSVRLTCHARSMVSEYSAVSR---NSLKEMGEIEKLLMEKCSELSAVTERCLQVENE 159
Query: 236 HYIGSNLVHFGELLTDLG 289
H + S E L+ LG
Sbjct: 160 HVLKSMKACVSETLSMLG 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,095,302
Number of Sequences: 237096
Number of extensions: 1599699
Number of successful extensions: 4714
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4706
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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