Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16b05
(839 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in IAP... 206 5e-52
UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in IAP2... 124 4e-27
UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5; ... 82 2e-14
UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineat... 64 3e-09
UniRef50_Q80LN7 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16; Nucleopolyhedro... 48 2e-04
UniRef50_A0EYW2 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q91BF3 Cluster: Putative uncharacterized protein; n=1; ... 43 0.011
UniRef50_Q0IL32 Cluster: ORF87; n=1; Leucania separata nuclear p... 37 0.55
UniRef50_UPI000150A015 Cluster: hypothetical protein TTHERM_0031... 37 0.72
UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -... 37 0.72
UniRef50_A3C407 Cluster: Putative uncharacterized protein; n=4; ... 35 2.2
UniRef50_UPI00006CFA10 Cluster: hypothetical protein TTHERM_0042... 35 2.9
UniRef50_Q7QU32 Cluster: GLP_725_33478_28370; n=1; Giardia lambl... 34 3.9
UniRef50_Q5AFT3 Cluster: Protein CFT1; n=4; Candida albicans|Rep... 34 3.9
UniRef50_Q7T9S2 Cluster: ORF_93; n=7; Granulovirus|Rep: ORF_93 -... 33 6.8
UniRef50_Q6BGY9 Cluster: Similar to CA3276|IPF6263 Candida albic... 33 6.8
UniRef50_Q5UQ73 Cluster: Uncharacterized protein L509; n=1; Acan... 33 6.8
>UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in
IAP2-VLF1 intergenic region; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 15.5 kDa
protein in IAP2-VLF1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 133
Score = 206 bits (503), Expect = 5e-52
Identities = 101/127 (79%), Positives = 108/127 (85%)
Frame = -3
Query: 399 MSNLMKNFFTEXXXXXXXXXXXXXXXXXXSDWLCEQVYPDKDFSLKLKRVINMFLNDEIE 220
MSNLMKNFFTE S+WLCEQVYPDKDFSLKLKRV+NMFLN+EIE
Sbjct: 1 MSNLMKNFFTELVKSTTFTTKVSVVKTTLSNWLCEQVYPDKDFSLKLKRVVNMFLNNEIE 60
Query: 219 NDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDNVLTQDELSFLANFL 40
N+KIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDNVLTQDELSFLANFL
Sbjct: 61 NNKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDNVLTQDELSFLANFL 120
Query: 39 VTKLERS 19
VTK++ +
Sbjct: 121 VTKMDEA 127
>UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in
IAP2-VLF1 intergenic region; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 9.4 kDa
protein in IAP2-VLF1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 84
Score = 124 bits (298), Expect = 4e-27
Identities = 67/85 (78%), Positives = 67/85 (78%)
Frame = -3
Query: 675 MNLYLLLGALTIFSLVYDKKENSXXXXXXXXXXXXXXXVSPAIISKNTESNVEDIPSHKA 496
MNLYLLLGAL IFSLVYDKKENS SPAIISKNTES VEDIPSHKA
Sbjct: 1 MNLYLLLGALAIFSLVYDKKENSIFLYLLILFLVFIIV-SPAIISKNTESTVEDIPSHKA 59
Query: 495 KSVRKKLEIEQALDAILNKNTSSID 421
KSVRKKLEIEQALDAILNKNTSSID
Sbjct: 60 KSVRKKLEIEQALDAILNKNTSSID 84
>UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 14.9 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 130
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/95 (38%), Positives = 61/95 (64%)
Frame = -3
Query: 309 DWLCEQVYPDKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALL 130
DWL QVYPD+ FS K + V+ MF++ +++ + +Y LV T+D S L+ Q+++L A
Sbjct: 31 DWLNSQVYPDERFSAKWRGVLKMFVDGQLDEESVYCLVNTIDPSKLLTVGQINYLARAFR 90
Query: 129 NNVSVTFTLHRFVDDNVLTQDELSFLANFLVTKLE 25
NN + +FVD L+ D++S L+N+LV ++E
Sbjct: 91 NNRKMMSITQKFVDGYRLSDDDISELSNYLVAQVE 125
>UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: Ac75-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 130
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/89 (35%), Positives = 51/89 (57%)
Frame = -3
Query: 282 DKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTL 103
DK F K +V+ MF+ +I + + ++ VDS NKL+ Q+DFL + +N V L
Sbjct: 38 DKRFCDKFVKVLKMFIASQITIEDMCNIMAAVDSPNKLTADQIDFLCQQVQHNHEVMRIL 97
Query: 102 HRFVDDNVLTQDELSFLANFLVTKLERSI 16
H FVD+ + ++ LA FL+T++ SI
Sbjct: 98 HTFVDEQHIDDQDIHELAKFLITEISNSI 126
>UniRef50_Q80LN7 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 129
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/86 (30%), Positives = 53/86 (61%)
Frame = -3
Query: 273 FSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRF 94
F++KL +++N+FL ++IE + + L+ + D N L+ QV++L + +NN +V L F
Sbjct: 41 FTVKLVKIVNLFLQEKIEVEDLQHLLNSTDGLN-LTINQVNYLYYQAVNNNNVIHILQLF 99
Query: 93 VDDNVLTQDELSFLANFLVTKLERSI 16
+ LT + ++ +A F+V ++ +I
Sbjct: 100 TKGHCLTDEHINDIAAFIVYEINNAI 125
>UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16;
Nucleopolyhedrovirus|Rep: LdOrf-85 peptide - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 86
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3
Query: 540 KNTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 421
K S+ D+ + KAKS++KK ++E+A DAILNKNTSS D
Sbjct: 47 KPESSDAADLQTGKAKSIKKKRDLERAFDAILNKNTSSTD 86
>UniRef50_A0EYW2 Cluster: Putative uncharacterized protein; n=1;
Ecotropis obliqua NPV|Rep: Putative uncharacterized
protein - Ecotropis obliqua NPV
Length = 130
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/89 (22%), Positives = 53/89 (59%)
Frame = -3
Query: 282 DKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTL 103
++ F+ K K ++ F++ EI D+I +++ D +L++ Q+++ ++ + + + L
Sbjct: 40 NEKFNKKFKTILQKFIDQEITLDQICTIIDAADGI-QLNKSQLNYFVNQMYLDCYLIDIL 98
Query: 102 HRFVDDNVLTQDELSFLANFLVTKLERSI 16
R++D N L + + ++A FLV ++ +++
Sbjct: 99 QRYIDYNQLNDENVHYVAEFLVLEINKAL 127
>UniRef50_Q91BF3 Cluster: Putative uncharacterized protein; n=1;
Spodoptera litura NPV|Rep: Putative uncharacterized
protein - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 127
Score = 42.7 bits (96), Expect = 0.011
Identities = 22/89 (24%), Positives = 48/89 (53%)
Frame = -3
Query: 282 DKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTL 103
D F V++MF+ ++ D + +VE VD +LS+ Q+++L + +N +
Sbjct: 38 DDSFRNTFITVLDMFVKGKVSVDSLMDVVEAVDI--ELSKSQLEYLCSRMFSNERIMSIA 95
Query: 102 HRFVDDNVLTQDELSFLANFLVTKLERSI 16
+ +++ L DE++ +A FLV ++ ++
Sbjct: 96 NVYIERQKLNSDEVNDVAEFLVHEVNNAL 124
>UniRef50_Q0IL32 Cluster: ORF87; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: ORF87 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 140
Score = 37.1 bits (82), Expect = 0.55
Identities = 23/93 (24%), Positives = 49/93 (52%)
Frame = -3
Query: 306 WLCEQVYPDKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLN 127
+L E Y D +L V +FL +I+ + + ++ E+V +L+ Q D+L + +
Sbjct: 30 YLKELAYEDT-LREQLVIVFKLFLQRKIDVESVKEVCESVGM--ELTDYQADYLRNRVYE 86
Query: 126 NVSVTFTLHRFVDDNVLTQDELSFLANFLVTKL 28
N + + F++ L DE+++++ FLV ++
Sbjct: 87 NDQLISIIENFIEHQSLRPDEINYVSEFLVHEI 119
>UniRef50_UPI000150A015 Cluster: hypothetical protein
TTHERM_00318640; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00318640 - Tetrahymena
thermophila SB210
Length = 804
Score = 36.7 bits (81), Expect = 0.72
Identities = 20/78 (25%), Positives = 41/78 (52%)
Frame = -3
Query: 249 INMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDNVLTQ 70
+N F N +E+++ Y +T+ S+ K+S + ++ +LNN + N+ Q
Sbjct: 431 VNNFSNTMMEDNRTYPTFQTMKSNEKISNEM--YQVNQILNNRGFSQQQLNQCQGNI-RQ 487
Query: 69 DELSFLANFLVTKLERSI 16
ELS + N ++ K+E ++
Sbjct: 488 SELSLIENEIIQKIENAV 505
>UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 85
Score = 36.7 bits (81), Expect = 0.72
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -3
Query: 537 NTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 421
NT+S D+ + + K +KK DAILNKN SS++
Sbjct: 47 NTDSAPHDLYNEETKKAKKKKHFNDMFDAILNKNNSSLE 85
>UniRef50_A3C407 Cluster: Putative uncharacterized protein; n=4; Oryza
sativa|Rep: Putative uncharacterized protein - Oryza
sativa subsp. japonica (Rice)
Length = 1972
Score = 35.1 bits (77), Expect = 2.2
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -3
Query: 228 EIENDKIYKLVETVDSSNKLSRRQVDFL-IHALLNNVSVTFTLHRFVDDNVLTQDELSFL 52
++ DK +VE++DSS ++ + Q D L + LL N L VDD T+DE+ L
Sbjct: 1416 QVGTDKSRDIVESIDSSERVLKYQDDILQLKVLLTN------LEEQVDDLRSTKDEVEIL 1469
Query: 51 ANFLVTKLE 25
L +KLE
Sbjct: 1470 NMVLKSKLE 1478
>UniRef50_UPI00006CFA10 Cluster: hypothetical protein
TTHERM_00421090; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00421090 - Tetrahymena
thermophila SB210
Length = 480
Score = 34.7 bits (76), Expect = 2.9
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 13/86 (15%)
Frame = -3
Query: 249 INMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNN---VSVTFTLHR------ 97
IN F ND ++ + KL +++ K+ + ++DF + + ++ S+T +++R
Sbjct: 262 INFFKNDNFTDNSLQKLADSLAEFTKIEKLKLDFHYNTIFSDKAFYSLTSSMNRMKGIQE 321
Query: 96 ----FVDDNVLTQDELSFLANFLVTK 31
F +N LT + L+ L+ L+TK
Sbjct: 322 MFLNFCKNNTLTDESLANLSRVLITK 347
>UniRef50_Q7QU32 Cluster: GLP_725_33478_28370; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_725_33478_28370 - Giardia lamblia
ATCC 50803
Length = 1702
Score = 34.3 bits (75), Expect = 3.9
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -3
Query: 138 ALLNNVSVTFTLHRFVDDNVLTQDELS 58
ALLN +S+TF + + +DDN L QD LS
Sbjct: 1120 ALLNTISLTFCIKKTLDDNALLQDFLS 1146
>UniRef50_Q5AFT3 Cluster: Protein CFT1; n=4; Candida albicans|Rep:
Protein CFT1 - Candida albicans (Yeast)
Length = 1420
Score = 34.3 bits (75), Expect = 3.9
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -3
Query: 234 NDEIENDKIYKLVETVDSSNKLSRRQVDFLIH-ALLNN-VSVTFTL 103
ND+ + D +YK E ++ +S+ ++FL H L+NN S TFTL
Sbjct: 467 NDDDDEDDLYKEEEEEETQKTISKSHIEFLYHDELINNGPSSTFTL 512
>UniRef50_Q7T9S2 Cluster: ORF_93; n=7; Granulovirus|Rep: ORF_93 -
Adoxophyes orana granulovirus (AoGV)
Length = 154
Score = 33.5 bits (73), Expect = 6.8
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 264 KLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSV 115
KL ++ MFLNDE++ +Y+L KL+ Q D+L N+ +
Sbjct: 51 KLNKIFKMFLNDELDQSMMYQL---FGDKLKLNHSQFDYLYQRTKNDAQI 97
>UniRef50_Q6BGY9 Cluster: Similar to CA3276|IPF6263 Candida albicans
IPF6263; n=1; Debaryomyces hansenii|Rep: Similar to
CA3276|IPF6263 Candida albicans IPF6263 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 864
Score = 33.5 bits (73), Expect = 6.8
Identities = 26/90 (28%), Positives = 43/90 (47%)
Frame = -3
Query: 297 EQVYPDKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVS 118
+Q +D LKL+ N N E EN+ + KL VD++ + ++ + N ++
Sbjct: 774 KQSLSKEDLKLKLEESFNRIYNLENENENL-KLKSLVDNTLNDNTNILNSNTNVNTNTIT 832
Query: 117 VTFTLHRFVDDNVLTQDELSFLANFLVTKL 28
T T F ++N + LS L N L TK+
Sbjct: 833 NTDTTEAFGNENQNNKAFLSELENTLSTKV 862
>UniRef50_Q5UQ73 Cluster: Uncharacterized protein L509; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein L509 - Mimivirus
Length = 280
Score = 33.5 bits (73), Expect = 6.8
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = -3
Query: 258 KRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVS--VTFTLHR-FVD 88
K + + L +I+N+K+ K+ T+D +NK + +D++++ L N++ + T H
Sbjct: 138 KSINDYHLIKKIDNNKLTKI--TIDDTNKWNTESIDYILNQLKNSIKPLIILTHHAPLFS 195
Query: 87 DNVL 76
DN+L
Sbjct: 196 DNIL 199
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,936,311
Number of Sequences: 1657284
Number of extensions: 11230883
Number of successful extensions: 30519
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 29322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30510
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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