Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16a16
(350 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 117 6e-26
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 116 1e-25
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 115 3e-25
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 111 2e-24
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 72 2e-12
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 72 3e-12
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 63 1e-09
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 54 9e-07
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-06
UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15; Therm... 50 8e-06
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 50 1e-05
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 44 7e-04
UniRef50_O59603 Cluster: 50S ribosomal protein L44E; n=15; Eurya... 38 0.063
UniRef50_Q3AV77 Cluster: Possible peptidase S26 family protein; ... 35 0.33
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 35 0.33
UniRef50_Q4T3I8 Cluster: Chromosome undetermined SCAF10033, whol... 33 1.8
UniRef50_UPI0000DB703D Cluster: PREDICTED: similar to ubiquitin ... 32 2.4
UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n... 32 2.4
UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1; ... 32 2.4
UniRef50_P39940 Cluster: E3 ubiquitin-protein ligase RSP5; n=31;... 32 3.1
UniRef50_UPI0000D561D4 Cluster: PREDICTED: similar to WD repeat ... 31 4.1
UniRef50_Q0IMZ5 Cluster: Os12g0524600 protein; n=20; Oryza sativ... 31 4.1
UniRef50_Q5CQT1 Cluster: Large low complexity protein with signa... 31 4.1
UniRef50_Q01W43 Cluster: Peptidase M50; n=1; Solibacter usitatus... 31 5.4
UniRef50_Q620M3 Cluster: Putative uncharacterized protein CBG027... 31 5.4
UniRef50_UPI00006CF34E Cluster: hypothetical protein TTHERM_0006... 31 7.2
UniRef50_Q4SVF2 Cluster: Chromosome 7 SCAF13760, whole genome sh... 31 7.2
UniRef50_Q94QP8 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 31 7.2
UniRef50_Q174M7 Cluster: Transient receptor potential cation cha... 31 7.2
UniRef50_Q0V3K3 Cluster: Predicted protein; n=1; Phaeosphaeria n... 31 7.2
UniRef50_Q6XLV7 Cluster: FirrV-1-E5; n=1; Feldmannia irregularis... 30 9.5
UniRef50_A6RQI4 Cluster: Putative uncharacterized protein; n=1; ... 30 9.5
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 117 bits (281), Expect = 6e-26
Identities = 58/101 (57%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Frame = -2
Query: 310 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 131
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 130 XXXXKIVLRLECAD--CKVRSQVALKRCKHFELGGDQEEKG 14
KIVLRLEC + C+ + +A+KRCKHFELGGD++ KG
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 116 bits (278), Expect = 1e-25
Identities = 57/101 (56%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Frame = -2
Query: 310 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 131
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 130 XXXXKIVLRLECAD--CKVRSQVALKRCKHFELGGDQEEKG 14
KIVLRLEC + C+ + +A+KRCKHFELGGD++ KG
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 115 bits (276), Expect = 3e-25
Identities = 55/100 (55%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Frame = -2
Query: 310 MVNVPKQRRTYXXXXXXXXXXXV-SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 134
MVNVPK RRT+ +QYKK KE AQGRRRYDRKQ G+GGQ+KPIF
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKK 60
Query: 133 XXXXXKIVLRLECADCKVRSQVALKRCKHFELGGDQEEKG 14
KIVLR+EC +CK + Q+ +KRCKHFELGG ++ +G
Sbjct: 61 AKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRG 100
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 111 bits (268), Expect = 2e-24
Identities = 55/101 (54%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
Frame = -2
Query: 307 VNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 134
VNVPK ++TY +QYKK K+ AAQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 48 VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 107
Query: 133 XXXXXKIVLRLECADCKVRSQVALKRCKHFELGGDQEEKGT 11
KIVLRL+C CK SQ +KRCKHFE+GGD++ KGT
Sbjct: 108 AKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGT 148
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 72.1 bits (169), Expect = 2e-12
Identities = 38/98 (38%), Positives = 54/98 (55%)
Frame = -2
Query: 310 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 131
MV+ PK ++ + VSQ + +ERH+A GRRRYDRKQ+G+GG+ KPI
Sbjct: 1 MVHHPKTKKFFCKFCKKHTMCKVSQASRGEERHSALGRRRYDRKQKGFGGRVKPILRRSK 60
Query: 130 XXXXKIVLRLECADCKVRSQVALKRCKHFELGGDQEEK 17
KI LR C CK + L R + FE ++++K
Sbjct: 61 KTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKKK 98
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 71.7 bits (168), Expect = 3e-12
Identities = 36/91 (39%), Positives = 48/91 (52%)
Frame = -2
Query: 310 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 131
MV P+ ++ Y +YK K AQG+RRYDRKQQGYGGQ+KP+F
Sbjct: 1 MVKYPRNQKKYCKFCKVHVEMKSYEYKPGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQV 60
Query: 130 XXXXKIVLRLECADCKVRSQVALKRCKHFEL 38
K ++L C CK +LKR K F++
Sbjct: 61 KNTKKPSIKLSCEICKKEFIKSLKRTKRFQI 91
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 63.3 bits (147), Expect = 1e-09
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = -2
Query: 238 QYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXKIVLRLECADCKVRSQVALK 59
QYKK K+ QG+RRYDRKQQG+GGQ+KP+F ++ ++EC CK+ +
Sbjct: 9 QYKKGKDSLHVQGKRRYDRKQQGFGGQTKPVFKKKAKQQRRL-FKIECTKCKIAQSLRES 67
Query: 58 RC 53
C
Sbjct: 68 TC 69
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 53.6 bits (123), Expect = 9e-07
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = -2
Query: 115 IVLRLECADCKVRSQVALKRCKHFELGGDQEEKGT 11
IVL+L+C CK SQ +KRCKHFE+GGD++ KGT
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKGT 86
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 52.4 bits (120), Expect = 2e-06
Identities = 37/87 (42%), Positives = 46/87 (52%)
Frame = -3
Query: 261 ATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKPLRKLCSVLSVPIAR 82
+T TR ST+ R P+ D ++ VTVV P+ SS RR +P R+L SV S AR
Sbjct: 24 STPPTRLPSTRRARTLFPPKESDDTTESNPVTVVRPSLSSTRRLRPPRRLSSVSSALSAR 83
Query: 81 *DHRLH*RDASTLSSVVTKKRKGPDDP 1
DAST SSVVT+ R P P
Sbjct: 84 PSTNSPSSDASTSSSVVTRSRGVPPFP 110
>UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15;
Thermoprotei|Rep: 50S ribosomal protein L44E - Aeropyrum
pernix
Length = 95
Score = 50.4 bits (115), Expect = 8e-06
Identities = 32/87 (36%), Positives = 39/87 (44%)
Frame = -2
Query: 298 PKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXX 119
PK+ RTY V+QY+ K R A G RRY RKQ+GYG Q +P
Sbjct: 4 PKRIRTYCPRCNTHTEHRVAQYRAGKRRAMALGERRYRRKQEGYGSQRRPEQKRFAKVTK 63
Query: 118 KIVLRLECADCKVRSQVALKRCKHFEL 38
K VL + C C + R K EL
Sbjct: 64 KQVLVITCTVCGRKRPFLGIRLKRLEL 90
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 49.6 bits (113), Expect = 1e-05
Identities = 31/86 (36%), Positives = 37/86 (43%)
Frame = -2
Query: 298 PKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXX 119
PKQ R Y VS YK K R +A G RR+ ++GYGGQ P
Sbjct: 4 PKQIRRYCPKCKKHTTQKVSIYKAGKRRASAIGERRHAEDKKGYGGQKFPKLAKPAKVTK 63
Query: 118 KIVLRLECADCKVRSQVALKRCKHFE 41
K+ L C DCK + R K FE
Sbjct: 64 KVTRLLTCPDCKKKFNTYGLRVKKFE 89
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 44.0 bits (99), Expect = 7e-04
Identities = 27/90 (30%), Positives = 38/90 (42%)
Frame = -2
Query: 307 VNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXX 128
+ +PK+ TY V + +K K G+RR+ R GYGG +P F
Sbjct: 1 MKMPKKIMTYCPYCKKHTSHSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREK 60
Query: 127 XXXKIVLRLECADCKVRSQVALKRCKHFEL 38
+I LRL C +C R K FE+
Sbjct: 61 PTKRIALRLVCDECHKAITPPGIRAKKFEI 90
>UniRef50_O59603 Cluster: 50S ribosomal protein L44E; n=15;
Euryarchaeota|Rep: 50S ribosomal protein L44E -
Pyrococcus horikoshii
Length = 94
Score = 37.5 bits (83), Expect = 0.063
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = -2
Query: 298 PKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXX 119
PKQ RTY V + K+ + G+RR+ R +GYGG +P
Sbjct: 4 PKQIRTYCPYCKRHTIHKVERVKRRPRSELSAGQRRFRRVLKGYGGFPRPKPEGREKPVK 63
Query: 118 KIVLRLECADC-KVRSQVALKRCKHFEL 38
K+ LR C C + ++ R K FEL
Sbjct: 64 KLDLRFVCTVCGRAHTRGKGFRVKRFEL 91
>UniRef50_Q3AV77 Cluster: Possible peptidase S26 family protein;
n=2; Synechococcus|Rep: Possible peptidase S26 family
protein - Synechococcus sp. (strain CC9902)
Length = 127
Score = 35.1 bits (77), Expect = 0.33
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -3
Query: 237 STKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKPLRKL 112
ST S + G +PR + +V SRVT NPS+K QK +L
Sbjct: 80 STDSRQLGPIPRSALIGVVTSRVTPAKKNPSTKTNQKSQNQL 121
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 35.1 bits (77), Expect = 0.33
Identities = 12/19 (63%), Positives = 18/19 (94%)
Frame = -2
Query: 67 ALKRCKHFELGGDQEEKGT 11
+++RCKHFE+GGD++ KGT
Sbjct: 55 SVQRCKHFEIGGDKKGKGT 73
>UniRef50_Q4T3I8 Cluster: Chromosome undetermined SCAF10033, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10033,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1494
Score = 32.7 bits (71), Expect = 1.8
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 100 QDGAQFS*WFLPSF*RWVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 255
++G F P W+W D+ N + D N+F F W C+ IP L
Sbjct: 49 ENGKDFRFDVSPDLLEWIWHDN-NQFLQDKNIFEHTYFGFMWQLCSSIPSSL 99
>UniRef50_UPI0000DB703D Cluster: PREDICTED: similar to ubiquitin
specific protease 34; n=1; Apis mellifera|Rep: PREDICTED:
similar to ubiquitin specific protease 34 - Apis
mellifera
Length = 3414
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +1
Query: 148 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVLCGIYIFCSTSCAVLVRSPFLSSF 324
W+W D+ + + D N+F F W C IP L I + A L S F+ +F
Sbjct: 2236 WIWQDNMH-FLQDKNIFEHTYFTFMWQICGYIPQTLFSIQSDITEMSADLSTSFFMETF 2293
>UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 66
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +3
Query: 216 LSLDFLYCDTLCTLWHLHFLQYVLRCFGTF 305
L+L LYC TLC LH LQ V FGT+
Sbjct: 5 LALPVLYCVTLCAECFLHPLQNVFLDFGTY 34
>UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 594
Score = 32.3 bits (70), Expect = 2.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 229 FCTVIPCVLCGIYIFCSTSC 288
F T+IPC C + +FCST C
Sbjct: 244 FLTLIPCKCCTVTMFCSTKC 263
>UniRef50_P39940 Cluster: E3 ubiquitin-protein ligase RSP5; n=31;
Dikarya|Rep: E3 ubiquitin-protein ligase RSP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 809
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 294 NSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVM 187
N++ T N ++T TR HST P +GT VE +
Sbjct: 158 NTSSTTRTNGHSTSSTRNHSTSHPSRGTAQAVESTL 193
>UniRef50_UPI0000D561D4 Cluster: PREDICTED: similar to WD repeat
domain 56; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to WD repeat domain 56 - Tribolium castaneum
Length = 749
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 12 VPFSSWSPPSSKCLHLFNATCDLTLQSAHSRRSTIF 119
V W PPS++ L L N T DL + + SR++ F
Sbjct: 466 VALDQWGPPSARMLALVNKTKDLYVVAPRSRKTESF 501
>UniRef50_Q0IMZ5 Cluster: Os12g0524600 protein; n=20; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0524600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 1425
Score = 31.5 bits (68), Expect = 4.1
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 228 SPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKPL--RKLCSVLSVP 91
SPR PR+ +VN R VSP+ +RR +PL R C+ LS P
Sbjct: 868 SPRHRLRPRLR---VVNPRAGRVSPSSKDRRRSRPLAVRLRCARLSPP 912
>UniRef50_Q5CQT1 Cluster: Large low complexity protein with signal
peptide, within large locus of signal peptide containing
proteins; n=3; Cryptosporidium|Rep: Large low complexity
protein with signal peptide, within large locus of
signal peptide containing proteins - Cryptosporidium
parvum Iowa II
Length = 2929
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -3
Query: 297 QNSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKR 136
+ S G ++N N + + HS + P+K LP+ ++ + + + +P +KR
Sbjct: 357 ETSEGEVSENENGKRNNKRHSKRRPKKPKLPKKWEIFTDDEKQEWLDRHPRTKR 410
>UniRef50_Q01W43 Cluster: Peptidase M50; n=1; Solibacter usitatus
Ellin6076|Rep: Peptidase M50 - Solibacter usitatus
(strain Ellin6076)
Length = 321
Score = 31.1 bits (67), Expect = 5.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 151 VWTDHRNPAVYDHNVFYPGQRAFPW 225
+W R+P++YD + PG+R W
Sbjct: 277 LWLGRRHPSIYDSTILSPGRRKLGW 301
>UniRef50_Q620M3 Cluster: Putative uncharacterized protein CBG02733;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG02733 - Caenorhabditis
briggsae
Length = 1157
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = -3
Query: 258 TKYTRY--HSTKSPRKGTLPRVEDVMIVNSRVTVVSP---NPSSKRRQKPLRKLCSVL 100
T+YTR +T + KG +PR ED +++ + V+SP + S+ R L KL L
Sbjct: 212 TQYTRTTKKTTYTISKGVIPRYEDPVVLRKQTRVMSPHYFSTSNLHRNDELPKLSETL 269
>UniRef50_UPI00006CF34E Cluster: hypothetical protein
TTHERM_00069490; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00069490 - Tetrahymena
thermophila SB210
Length = 1107
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -2
Query: 103 LECADCKVRSQVAL-KRCKHFELGG 32
LEC +CK+ Q AL +C +F+L G
Sbjct: 526 LECLECKINKQQALSSQCNYFDLNG 550
>UniRef50_Q4SVF2 Cluster: Chromosome 7 SCAF13760, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 7 SCAF13760, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 103
Score = 30.7 bits (66), Expect = 7.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 213 CLSLDFLYCDTLCTLWHLHFL 275
C S D L+C +C WH+ +L
Sbjct: 70 CCSFDALFCILMCVFWHVRYL 90
>UniRef50_Q94QP8 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=5; Bilateria|Rep: NADH-ubiquinone oxidoreductase chain
5 - Inversidens japanensis
Length = 588
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 210 ACLSLDFLYCDTLCTLWHLHFLQYVLRC-FGTFTIFEFVRHDINK 341
ACL LD L TL HL F+ YVL + ++F + H + K
Sbjct: 271 ACLELDIKKLVALSTLSHLGFMVYVLGVGYPVLSVFHLLSHALFK 315
>UniRef50_Q174M7 Cluster: Transient receptor potential cation
channel protein painless; n=2; Aedes aegypti|Rep:
Transient receptor potential cation channel protein
painless - Aedes aegypti (Yellowfever mosquito)
Length = 914
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 195 LLPWAACLSLDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFEFVRHDI 335
L+ W LSL F +CT + L F YV+ C+G + +F++ +
Sbjct: 495 LIKWLR-LSLYFYINFVICTCFFLCFTWYVVGCYGQDNVDQFLKESL 540
>UniRef50_Q0V3K3 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 2460
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -3
Query: 288 AGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRR 133
A RT ++ NA +SPR +LPR D IV+ SP +RR
Sbjct: 1853 ADRTLESENADLPAPEPIVESPRDESLPRERDFAIVDGPAVESSPREKQRRR 1904
>UniRef50_Q6XLV7 Cluster: FirrV-1-E5; n=1; Feldmannia irregularis
virus a|Rep: FirrV-1-E5 - Feldmannia irregularis virus a
Length = 128
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 249 TRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRR 133
TR +TKS R +P + +M R+ +++ PS+K+R
Sbjct: 4 TRSMATKSRRTAPMPTYDQLMAHAKRIALITKPPSAKKR 42
>UniRef50_A6RQI4 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 226
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 228 SPRKGTLPRVEDVMIVNSRVTVVSPNPSSKR 136
S ++ LP ED+ I N V V+ P P +KR
Sbjct: 88 SAKEPLLPGDEDIQIDNGNVEVIDPQPKTKR 118
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,091,801
Number of Sequences: 1657284
Number of extensions: 6374398
Number of successful extensions: 17475
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 17113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17467
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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