Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc16a01
(779 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41473 Cluster: Uncharacterized 30.6 kDa protein in IAP... 319 4e-86
UniRef50_P41472 Cluster: Uncharacterized 11.5 kDa protein in IAP... 161 2e-38
UniRef50_O10327 Cluster: Uncharacterized 19.5 kDa protein; n=7; ... 142 1e-32
UniRef50_Q0KDZ9 Cluster: 5-Carboxymethyl-2-hydroxymuconate isome... 37 0.49
UniRef50_Q245T0 Cluster: Putative uncharacterized protein; n=1; ... 37 0.65
UniRef50_Q9BLJ6 Cluster: BAG domain-containing protein Samui; n=... 36 1.5
UniRef50_P60412 Cluster: Keratin-associated protein 10-11; n=80;... 35 2.0
UniRef50_Q8A5L6 Cluster: TPR-repeat-containing protein; n=1; Bac... 35 2.6
UniRef50_Q183R2 Cluster: Putative uncharacterized protein; n=2; ... 35 2.6
UniRef50_Q233K3 Cluster: Putative uncharacterized protein; n=3; ... 35 2.6
UniRef50_A2R446 Cluster: Contig An14c0190, complete genome; n=10... 35 2.6
UniRef50_Q8V5S7 Cluster: ORF70; n=3; Nucleopolyhedrovirus|Rep: O... 34 3.5
UniRef50_Q23EF5 Cluster: Putative uncharacterized protein; n=2; ... 34 3.5
UniRef50_A2EMS2 Cluster: CK1 family protein kinase; n=1; Trichom... 34 3.5
UniRef50_UPI0000D56BBD Cluster: PREDICTED: similar to CG4329-PA,... 34 4.6
UniRef50_Q74DK9 Cluster: Ferritin; n=10; cellular organisms|Rep:... 34 4.6
UniRef50_A7GX77 Cluster: Protein CysQ; n=3; Campylobacter|Rep: P... 34 4.6
UniRef50_A0CRE9 Cluster: Chromosome undetermined scaffold_25, wh... 34 4.6
UniRef50_A3GHB5 Cluster: Predicted protein; n=1; Pichia stipitis... 34 4.6
UniRef50_A4ZHC3 Cluster: Orf176; n=1; Phytophthora ramorum|Rep: ... 33 6.1
UniRef50_Q4CS36 Cluster: Putative uncharacterized protein; n=2; ... 33 6.1
UniRef50_A0CKK3 Cluster: Chromosome undetermined scaffold_2, who... 33 6.1
UniRef50_Q972V5 Cluster: Putative uncharacterized protein STS118... 33 6.1
UniRef50_A0AKH4 Cluster: Complete genome; n=1; Listeria welshime... 33 8.0
UniRef50_Q8ILN9 Cluster: Putative uncharacterized protein; n=2; ... 33 8.0
UniRef50_Q7RF31 Cluster: Putative uncharacterized protein PY0488... 33 8.0
UniRef50_Q8ZUX9 Cluster: Asparaginyl-tRNA synthetase; n=6; Therm... 33 8.0
UniRef50_A5UKX7 Cluster: Transcriptional regulator, TetR/AcrR fa... 33 8.0
>UniRef50_P41473 Cluster: Uncharacterized 30.6 kDa protein in
IAP2-VLF1 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 30.6 kDa
protein in IAP2-VLF1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 265
Score = 319 bits (784), Expect = 4e-86
Identities = 152/173 (87%), Positives = 154/173 (89%)
Frame = -1
Query: 779 KTEQTDAPAXSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKE 600
KTEQ DAPA SGD NNRKVVDAN DEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKE
Sbjct: 95 KTEQADAPATSGD--NNRKVVDANVDEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKE 152
Query: 599 TNMKEYEQVYTLGRQLYEVLRSIFVDEPFKLWLERNTHEFDNNTDKILETLQSEXXXXXX 420
+MKEYEQVYTLGRQLYEVLRSIFVDEPFKLWLERNTHEFDNN DKILETLQSE
Sbjct: 153 VSMKEYEQVYTLGRQLYEVLRSIFVDEPFKLWLERNTHEFDNNKDKILETLQSELKLALA 212
Query: 419 XXXXXKTCTFKDIITNFLNTKLDCRYDCADEYIKPNCIVDTYNCCNLVFKKET 261
KTCTFKDIITN LNTKLDC+YDCADEYIKPNCIVDTYNCCNLVFKKET
Sbjct: 213 DKDKLKTCTFKDIITNLLNTKLDCKYDCADEYIKPNCIVDTYNCCNLVFKKET 265
>UniRef50_P41472 Cluster: Uncharacterized 11.5 kDa protein in
IAP2-VLF1 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 11.5 kDa
protein in IAP2-VLF1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 99
Score = 161 bits (390), Expect = 2e-38
Identities = 75/86 (87%), Positives = 82/86 (95%)
Frame = -3
Query: 261 MNTSVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTKKLI 82
MNTSVD VTKLI LQN+VLD+MREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTKKLI
Sbjct: 1 MNTSVDVVTKLIHLQNNVLDIMREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTKKLI 60
Query: 81 ESNAMVFDETNKNLKFIHNSISICLN 4
ESNA+VFDE +KNLK IHN+I++CLN
Sbjct: 61 ESNAIVFDEKSKNLKIIHNNINMCLN 86
>UniRef50_O10327 Cluster: Uncharacterized 19.5 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 19.5 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 172
Score = 142 bits (343), Expect = 1e-32
Identities = 72/168 (42%), Positives = 103/168 (61%), Gaps = 3/168 (1%)
Frame = -1
Query: 764 DAPAXSGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKETNMKE 585
+APA + D +R+ + A +D+YTVDGL+LK YV YY+ L+ +V+ V+ +SK+ +++E
Sbjct: 6 EAPAVAATDKPHRRTLRAAQDDYTVDGLRLKPAYVEYYRQLQEIVELAVITLSKQLDIRE 65
Query: 584 YEQVYTLGRQLYEVLRSIFVDEPFKLWLERNTHEFDNNTDKILETLQSEXXXXXXXXXXX 405
++VY+L RQLYE+LR FVDEPFKLWLE N D + +
Sbjct: 66 VQEVYSLARQLYEILRGQFVDEPFKLWLETNASRL--AADAEFKKSMHKILQDQLQTLTA 123
Query: 404 KTCTFKDIITNFLNTKLDC---RYDCADEYIKPNCIVDTYNCCNLVFK 270
KT TFK+ + N LN +L YD + YIKPNCIV T+ CC+L F+
Sbjct: 124 KTNTFKNAVLNVLNNELSTDANLYDTSAGYIKPNCIVTTFTCCDLTFE 171
>UniRef50_Q0KDZ9 Cluster: 5-Carboxymethyl-2-hydroxymuconate
isomerase; n=1; Ralstonia eutropha H16|Rep:
5-Carboxymethyl-2-hydroxymuconate isomerase - Ralstonia
eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 130
Score = 37.1 bits (82), Expect = 0.49
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = -3
Query: 579 ASVHVRQTVVRGFAQHFCRRAVQTVAGTQHARI*QQYRQNFRNFTERIETCAGR*RQIEN 400
A VHV V RG +Q R V + T A + YR+ + + + AG R + N
Sbjct: 61 AFVHVTLAVARGRSQDVLDRTVSALFDTLTAHFAEPYRRRYLALSLELREFAGAYRSLNN 120
Query: 399 VHVQRYH 379
+H QRY+
Sbjct: 121 IH-QRYN 126
>UniRef50_Q245T0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1589
Score = 36.7 bits (81), Expect = 0.65
Identities = 23/100 (23%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = -3
Query: 297 VQLLQFSFQKRNMNTSVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQF 118
+Q L F Q+ N+N + A K + ++D + + +Y N T ++++ N Q
Sbjct: 801 IQDLDFVSQENNINQKLSAYIKKLCQSQGIIDNVGFITEYFNPYT-QFSLQGFNGTDAQQ 859
Query: 117 DFLDEMLTKKLIESNAMVFDETNKNLKF-IHNSISICLNR 1
+++++L K+I N ++ T+ +L + +S +I L++
Sbjct: 860 QYINQILKMKVI--NYPIYFTTDSSLVLNVSDSTNIILSQ 897
>UniRef50_Q9BLJ6 Cluster: BAG domain-containing protein Samui; n=1;
Bombyx mori|Rep: BAG domain-containing protein Samui -
Bombyx mori (Silk moth)
Length = 677
Score = 35.5 bits (78), Expect = 1.5
Identities = 23/90 (25%), Positives = 46/90 (51%)
Frame = -3
Query: 270 KRNMNTSVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTK 91
K +S D +T+++ +Q DVL++M +V+ + + K++ FLDEMLT+
Sbjct: 371 KTQQPSSNDPITQILSIQTDVLNLMTDVENFTGTKKD-----------KRYLFLDEMLTR 419
Query: 90 KLIESNAMVFDETNKNLKFIHNSISICLNR 1
LI+ + + D +N++ C+ +
Sbjct: 420 NLIKLDNIETD-GKENIRQARKEAIKCIQK 448
>UniRef50_P60412 Cluster: Keratin-associated protein 10-11; n=80;
Eutheria|Rep: Keratin-associated protein 10-11 - Homo
sapiens (Human)
Length = 298
Score = 35.1 bits (77), Expect = 2.0
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +2
Query: 293 CTCPLYNSA*YTRRRNRICNPISCSRNW**YL*TCTFSICLYRP-AQVSIRSVKFLKFCL 469
C P+ + A Y+R + C P +C CT S C RP + VS+ +
Sbjct: 203 CCVPVCSRASYSRCQQPSCQP-AC----------CTTSCC--RPSSSVSLLCHPVCR-ST 248
Query: 470 YCCQIRACCVPATV*TARRQKCCAKPRTTVCLTCTLARI-LSCWSLC 607
C + +CC P T+ Q C P + V L C A L+C+SLC
Sbjct: 249 CCVPVSSCCAP----TSSCQSSCCCPASCVSLLCRPASSRLACYSLC 291
>UniRef50_Q8A5L6 Cluster: TPR-repeat-containing protein; n=1;
Bacteroides thetaiotaomicron|Rep: TPR-repeat-containing
protein - Bacteroides thetaiotaomicron
Length = 595
Score = 34.7 bits (76), Expect = 2.6
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = -3
Query: 294 QLLQFSFQKRNMNTSVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYT-IES-LNAPGKQ 121
++ Q +++ + S++ + K + +N + +++ +YL SD ++S LN +Q
Sbjct: 390 EMAQLVNKRQLLYKSIETIKKELEKKNIEIKEIQQHCEYLESDVNSKAQLDSCLNELLEQ 449
Query: 120 FDFLDEMLTKKLIESNAMVFDETNKNLKFI 31
+ + E L ++L+E + V N NLKFI
Sbjct: 450 YHLMQEDLERRLVERDEEVKQLRNLNLKFI 479
>UniRef50_Q183R2 Cluster: Putative uncharacterized protein; n=2;
Clostridium difficile|Rep: Putative uncharacterized
protein - Clostridium difficile (strain 630)
Length = 458
Score = 34.7 bits (76), Expect = 2.6
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 13/91 (14%)
Frame = -3
Query: 234 KLIRLQNDV------LDMMREVDQY------LNSDTPDYTIESLNAPGKQFDFLDEMLTK 91
KL+ Q D+ +D +RE + Y ++S+ YTI+ N P +DF + L
Sbjct: 97 KLLNSQKDIDFTKSFMDFLREDNNYYDIYSLIDSNKCPYTIKDFNIPQPVYDF--KKLND 154
Query: 90 KLIESNAMVFDETNKNLKFIHNSISIC-LNR 1
KL+E + + + NL F N I C LN+
Sbjct: 155 KLLEIHLDLLRDNKINLSFTRNYIISCELNK 185
>UniRef50_Q233K3 Cluster: Putative uncharacterized protein; n=3;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 931
Score = 34.7 bits (76), Expect = 2.6
Identities = 25/78 (32%), Positives = 39/78 (50%)
Frame = -3
Query: 249 VDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTKKLIESNA 70
V TK I+L + D+ ++VD YLN P + L+ K F + L KK+ ++N
Sbjct: 598 VSLATK-IKLIQTIQDIQQQVDNYLN--IPSLKQQILDKIHKDFVNKNSELLKKINDANT 654
Query: 69 MVFDETNKNLKFIHNSIS 16
+ DE K + I N+ S
Sbjct: 655 KIADEFRKFVNDIFNTNS 672
>UniRef50_A2R446 Cluster: Contig An14c0190, complete genome; n=10;
Pezizomycotina|Rep: Contig An14c0190, complete genome -
Aspergillus niger
Length = 1786
Score = 34.7 bits (76), Expect = 2.6
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 496 RSSHSLNGSSTKMLRKTSYNCLPNVYTCSYSF--MLVSLLTYITKKSTSIFKHL*YATYF 669
R LN T+ L +YNCL + TC SF LVS+L+ T + SI K + TY
Sbjct: 775 RKIPDLNERQTRFL---TYNCLDFIVTCLQSFNESLVSVLSQPTVSTDSIVKQSTFVTYI 831
Query: 670 DL 675
L
Sbjct: 832 RL 833
>UniRef50_Q8V5S7 Cluster: ORF70; n=3; Nucleopolyhedrovirus|Rep:
ORF70 - Helicoverpa zea SNPV
Length = 152
Score = 34.3 bits (75), Expect = 3.5
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = -1
Query: 677 LKSKYVAYYKCLKILVDFLVMYVSKE-TNMKEYEQVYTLGRQLYEVLRSIFVDEPFKLWL 501
LK+ Y+AYY+ +K L++ +V +VS + +Y++ +L + + FV W
Sbjct: 24 LKTNYIAYYQQIKKLINLIVAFVSNDNVTADDYKEFVHTVVELLDYIIQDFVGNKVHFWS 83
Query: 500 ERNTHEFDNNTDKILETLQ 444
+ ++ N+ I+ LQ
Sbjct: 84 LQQSN-VKNDCQLIVNRLQ 101
>UniRef50_Q23EF5 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 3545
Score = 34.3 bits (75), Expect = 3.5
Identities = 31/151 (20%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Frame = -3
Query: 468 RQNFRNFTERIETCAGR*RQIENVHVQRYHHQFLEHEIGLQIRLRRRVY*AELYSGHVQL 289
+Q N+ + I+T Q N+ QF + +I ++R ++ A+ + H ++
Sbjct: 1603 KQTENNYEKIIQTHGQNHAQFSNIQNNSDQSQFNQQKIFQKMRQKKASTFAKNANAHFEV 1662
Query: 288 LQFSFQKRNMNTSVDAVTKLIRLQNDVLDMMREVD-QYLNSDTPDYTIESLNAPGKQFDF 112
S + N ++ N + E+D Q L D + ++S+N+ + +
Sbjct: 1663 SLTSSYQINDTNQFSGISFPCSPINQ--NKYAELDEQLLQLDVQEIELKSMNSAQQNIEQ 1720
Query: 111 LDEMLTKKLIESNAMVFDETNKNLKFIHNSI 19
L K L +S+ + N +F+ NSI
Sbjct: 1721 RKPQLVKSLKQSDFTINTNQQANTEFVENSI 1751
>UniRef50_A2EMS2 Cluster: CK1 family protein kinase; n=1;
Trichomonas vaginalis G3|Rep: CK1 family protein kinase
- Trichomonas vaginalis G3
Length = 342
Score = 34.3 bits (75), Expect = 3.5
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Frame = -3
Query: 267 RNMNTSVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTI------ESLN-APGKQFDFL 109
R M + A T L +++LD+ REV + D PDY + E++N +P K+ F
Sbjct: 196 RQMKNDISATTLLKSFPDEILDIYREVRKLKYEDQPDYELYKRLIREAINQSPQKKSGFD 255
Query: 108 DEMLTKKLIE 79
E +K +E
Sbjct: 256 WEYFNRKQVE 265
>UniRef50_UPI0000D56BBD Cluster: PREDICTED: similar to CG4329-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG4329-PA, isoform A - Tribolium castaneum
Length = 1241
Score = 33.9 bits (74), Expect = 4.6
Identities = 30/121 (24%), Positives = 54/121 (44%)
Frame = -3
Query: 450 FTERIETCAGR*RQIENVHVQRYHHQFLEHEIGLQIRLRRRVY*AELYSGHVQLLQFSFQ 271
+ + IE + Q+EN HVQ H+ L+ + Q++L + EL + + + L F ++
Sbjct: 732 YCQAIEELKEKNEQLENDHVQEIHNINLDIK---QMKLDHEEFVRELEANYNEKLIFEYE 788
Query: 270 KRNMNTSVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTK 91
K + + K+ R LD +R+ Q + +E L QF+ L E +
Sbjct: 789 K--YLRLEEKMEKMRRYYEKELDDLRKAKQDSEEIITNGFLEKLEEKQMQFEELVEQTAR 846
Query: 90 K 88
K
Sbjct: 847 K 847
>UniRef50_Q74DK9 Cluster: Ferritin; n=10; cellular organisms|Rep:
Ferritin - Geobacter sulfurreducens
Length = 173
Score = 33.9 bits (74), Expect = 4.6
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = -3
Query: 315 ELYSGHVQLLQFSFQKRNMNTSVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLN 136
ELYS + L S+ +M A +++ Q ++L M+ QY+NS T+ ++
Sbjct: 17 ELYSAQLYLSMSSYAN-SMGLKGAATWFMVQYQEEMLHFMKFY-QYINSQGEHVTLGPID 74
Query: 135 APGKQFDFLDEMLTKKL 85
AP +F L +M K L
Sbjct: 75 APPAEFASLLQMFEKTL 91
>UniRef50_A7GX77 Cluster: Protein CysQ; n=3; Campylobacter|Rep:
Protein CysQ - Campylobacter curvus 525.92
Length = 728
Score = 33.9 bits (74), Expect = 4.6
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -3
Query: 186 DQYLNSDTPDYTIESLN--APGKQFDFLDEMLTKKLIESNAMVFDETNKNLKFIHNSIS 16
DQ++ D DYT ++ PGK +FL + K+ + + A + T++ KF+ +SIS
Sbjct: 501 DQFIYGDDYDYTKDNGKDYVPGKYENFLTQEKNKEEVSAYATQYFYTSEGRKFLRHSIS 559
>UniRef50_A0CRE9 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_25,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1192
Score = 33.9 bits (74), Expect = 4.6
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +1
Query: 448 KVSKILSVLLSNSCVLRSSHSLNGSSTKMLRKTSYNCLPNVYTCSYSFMLVSLLTYITKK 627
KV KIL + + +++ L+ S +L+ + L N+Y S +LV L +I K
Sbjct: 331 KVIKILDLQNGSEKTIKNLQELSCVSDNLLQDNAEQVLHNIYENQKSQILVRLRNHIHNK 390
Query: 628 STSIFKHL*YATYFDLS 678
S + K+L + +LS
Sbjct: 391 SKGVSKYLVFEQQTNLS 407
>UniRef50_A3GHB5 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 1087
Score = 33.9 bits (74), Expect = 4.6
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = -3
Query: 234 KLIRLQNDVLDMMREVDQYLNSDTPD--YTIESLNAPGKQFDFLDEMLTKKLIE 79
+L+ N++ + +E D++ +D D + IE L K+FDF DE+ +K+++
Sbjct: 478 QLVEETNELNEGFKEKDEFYENDLTDLEFIIEQLLEVAKEFDFSDEIGRRKMLQ 531
>UniRef50_A4ZHC3 Cluster: Orf176; n=1; Phytophthora ramorum|Rep:
Orf176 - Phytophthora ramorum (Sudden oak death agent)
Length = 176
Score = 33.5 bits (73), Expect = 6.1
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = -1
Query: 740 DNNNRKV-VDANEDEYTVDGLKLKSKYVAYYKCLKILVDFL-VMYVSKETNMK---EYEQ 576
DNNN++V N+ E + KL+ ++YYK + +L+ FL +Y++ T + E+
Sbjct: 43 DNNNQQVNQQVNQQEKITN--KLEKNKISYYKIVTVLIIFLGFLYINVYTGTSIDFKTEE 100
Query: 575 VYTLGRQLYEVLRS 534
+ L QL E++ S
Sbjct: 101 LQVLLDQLVEIVNS 114
>UniRef50_Q4CS36 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 676
Score = 33.5 bits (73), Expect = 6.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 443 SVKFLKFCLYCCQIRACCVPATV*TARRQKCC 538
S L C CC R CC P T + +R +CC
Sbjct: 94 SFPLLFLCALCC--RCCCTPGTAGSTKRARCC 123
>UniRef50_A0CKK3 Cluster: Chromosome undetermined scaffold_2, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_2,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 2413
Score = 33.5 bits (73), Expect = 6.1
Identities = 25/91 (27%), Positives = 48/91 (52%)
Frame = -3
Query: 285 QFSFQKRNMNTSVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQFDFLD 106
QFS K NT D KLI+LQND++ + V+ + DT Y I+ +N + L+
Sbjct: 340 QFSLSK---NTLKDKDQKLIQLQNDLMKYKKLVENKKDIDTQKY-IQVINELKLESSNLE 395
Query: 105 EMLTKKLIESNAMVFDETNKNLKFIHNSISI 13
+ + +I+ +E N+ L+ +++ +++
Sbjct: 396 KKYQQLVIQEK--FGEENNQELQNLNDQLNV 424
>UniRef50_Q972V5 Cluster: Putative uncharacterized protein STS118;
n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
protein STS118 - Sulfolobus tokodaii
Length = 51
Score = 33.5 bits (73), Expect = 6.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 731 NRKVVDANEDEYTVDGLKLKSKYVAYYKCLKILV 630
N ++ N+DEY V+ K+ +KY Y CL+ L+
Sbjct: 16 NEAIISVNQDEYLVEAFKIATKYKIY--CLRCLI 47
>UniRef50_A0AKH4 Cluster: Complete genome; n=1; Listeria welshimeri
serovar 6b str. SLCC5334|Rep: Complete genome - Listeria
welshimeri serovar 6b (strain ATCC 35897 / DSM 20650
/SLCC5334)
Length = 756
Score = 33.1 bits (72), Expect = 8.0
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = -3
Query: 186 DQYLNSDTPDYTIESLNAPGKQFDFLD-EMLTKKLIESNAM--VFDETNKNLKFIHNSIS 16
++ L++ DY + LN GK+ ++D E LT+KL E + + + D K+L NS+
Sbjct: 350 ERILSTSDGDYKLAYLNVDGKELGWIDSESLTEKLTEDSKVEQIEDTLLKHLDLNDNSLQ 409
Query: 15 I 13
I
Sbjct: 410 I 410
>UniRef50_Q8ILN9 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1253
Score = 33.1 bits (72), Expect = 8.0
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 749 SGDDNNNRKVVDANEDEYTVDGLKLKSKYVAYYKCLKI--LVDFLVMYVSKET 597
+ D+NNN N+++ D L+L KY+ Y + L +FL+ Y+SKET
Sbjct: 453 NNDNNNNDNNNHNNDEKGEKDMLRLYYKYINKYANTEFMKLNEFLLYYISKET 505
>UniRef50_Q7RF31 Cluster: Putative uncharacterized protein PY04880;
n=11; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04880 - Plasmodium yoelii yoelii
Length = 2294
Score = 33.1 bits (72), Expect = 8.0
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 529 KMLRKTSYNCLPNVYTCSYSFMLVSLL-TYITKKS--TSIFKHL*YATYFDLSFKPSTVY 699
K L K +Y N+Y CS + + V +YI K+ I++H Y +LS K S +Y
Sbjct: 1597 KNLNKINYELFKNLYKCSLTIISVIFAHSYINKEDALNFIYQHFDDIKYLNLSTKSSLLY 1656
Query: 700 SS 705
+
Sbjct: 1657 KN 1658
>UniRef50_Q8ZUX9 Cluster: Asparaginyl-tRNA synthetase; n=6;
Thermoproteales|Rep: Asparaginyl-tRNA synthetase -
Pyrobaculum aerophilum
Length = 348
Score = 33.1 bits (72), Expect = 8.0
Identities = 27/75 (36%), Positives = 37/75 (49%)
Frame = -1
Query: 698 YTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKETNMKEYEQVYTLGRQLYEVLRSIFVDE 519
Y +D K+ Y + L+ ++V YV K+ + KE E V LGRQLYE R
Sbjct: 139 YQLDLEMYKATYHEAMDLAEDLITYVVKYV-KDVHGKELEAV--LGRQLYEFKR------ 189
Query: 518 PFKLWLERNTHEFDN 474
PFK + + EF N
Sbjct: 190 PFKRYSHKEAVEFVN 204
>UniRef50_A5UKX7 Cluster: Transcriptional regulator, TetR/AcrR
family; n=1; Methanobrevibacter smithii ATCC 35061|Rep:
Transcriptional regulator, TetR/AcrR family -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 207
Score = 33.1 bits (72), Expect = 8.0
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = -1
Query: 743 DDNNNRKVVDANEDEYTVDGLKLKSKYVAYYKCLKIL-VDFLVMYVSKETNMKEYEQVYT 567
DD N RK+++ N +E+ G ++ + + K LKI+ + F+ MY E +KE+
Sbjct: 69 DDENIRKLLEENPEEFYHQGSEMFKQQIFEEKILKIMKLIFVQMYQIDE--VKEFFLREI 126
Query: 566 LGRQLYEVLRSIFVDEPFKLWLERNTHEFDNNTDKILE 453
LG + F + F++ +++N D N +K+ E
Sbjct: 127 LGGS------TDFWSDVFEILIQKNVIGSDCNPNKLAE 158
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,565,582
Number of Sequences: 1657284
Number of extensions: 14036341
Number of successful extensions: 46117
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 43630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46059
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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