Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15p23
         (310 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC026181-1|AAH26181.1|  485|Homo sapiens ZNF639 protein protein.       29   2.8  
BC020500-1|AAH20500.1|  485|Homo sapiens zinc finger protein 639...    29   2.8  
AF003924-1|AAF21240.1|  485|Homo sapiens ANC_2H01 protein.             29   2.8  
AB097862-1|BAC77610.1|  485|Homo sapiens Kruppel-like zinc finge...    29   2.8  
BC068569-1|AAH68569.1|  969|Homo sapiens ZHX3 protein protein.         28   6.4  
AL022394-9|CAI42890.1|  120|Homo sapiens zinc fingers and homeob...    28   6.4  
AL022394-8|CAI42889.1|  166|Homo sapiens zinc fingers and homeob...    28   6.4  
AL022394-7|CAI42888.1|  498|Homo sapiens zinc fingers and homeob...    28   6.4  
AL022394-5|CAA18538.1|  956|Homo sapiens zinc fingers and homeob...    28   6.4  
AB081948-1|BAC65211.1|  956|Homo sapiens transcription factor ZH...    28   6.4  
AB007855-1|BAA23691.3| 1003|Homo sapiens KIAA0395 protein protein.     28   6.4  

>BC026181-1|AAH26181.1|  485|Homo sapiens ZNF639 protein protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
 Frame = +2

Query: 14  YLCKYCKWR---IDKLLRFIRQCHLASEMVWRDLKKVRIHIGCSLLQHQLSSSDCTSLYL 184
           Y+CKYC ++    + L + I   H +  + W +   V+      L  H      C   YL
Sbjct: 260 YICKYCDYKTVIFENLSQHIADTHFSDHLYWCEQCDVQFSSSSELYLH-FQEHSCDEQYL 318


>BC020500-1|AAH20500.1|  485|Homo sapiens zinc finger protein 639
           protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
 Frame = +2

Query: 14  YLCKYCKWR---IDKLLRFIRQCHLASEMVWRDLKKVRIHIGCSLLQHQLSSSDCTSLYL 184
           Y+CKYC ++    + L + I   H +  + W +   V+      L  H      C   YL
Sbjct: 260 YICKYCDYKTVIFENLSQHIADTHFSDHLYWCEQCDVQFSSSSELYLH-FQEHSCDEQYL 318


>AF003924-1|AAF21240.1|  485|Homo sapiens ANC_2H01 protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
 Frame = +2

Query: 14  YLCKYCKWR---IDKLLRFIRQCHLASEMVWRDLKKVRIHIGCSLLQHQLSSSDCTSLYL 184
           Y+CKYC ++    + L + I   H +  + W +   V+      L  H      C   YL
Sbjct: 260 YICKYCDYKTVIFENLSQHIADTHFSDHLYWCEQCDVQFSSSSELYLH-FQEHSCDEQYL 318


>AB097862-1|BAC77610.1|  485|Homo sapiens Kruppel-like zinc finger
           protein protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
 Frame = +2

Query: 14  YLCKYCKWR---IDKLLRFIRQCHLASEMVWRDLKKVRIHIGCSLLQHQLSSSDCTSLYL 184
           Y+CKYC ++    + L + I   H +  + W +   V+      L  H      C   YL
Sbjct: 260 YICKYCDYKTVIFENLSQHIADTHFSDHLYWCEQCDVQFSSSSELYLH-FQEHSCDEQYL 318


>BC068569-1|AAH68569.1|  969|Homo sapiens ZHX3 protein protein.
          Length = 969

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 11  LYLCKYCKWRIDKLLRFIRQCHLASEMVWRDLKKVRIHIGCSLL 142
           LY CKYC +R   + +F+   H+ SE    +     +  GCS L
Sbjct: 76  LYSCKYCDFRSHDMTQFVG--HMNSEHTDFNKDPTFVCSGCSFL 117


>AL022394-9|CAI42890.1|  120|Homo sapiens zinc fingers and
           homeoboxes 3 protein.
          Length = 120

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 11  LYLCKYCKWRIDKLLRFIRQCHLASEMVWRDLKKVRIHIGCSLL 142
           LY CKYC +R   + +F+   H+ SE    +     +  GCS L
Sbjct: 76  LYSCKYCDFRSHDMTQFVG--HMNSEHTDFNKDPTFVCSGCSFL 117


>AL022394-8|CAI42889.1|  166|Homo sapiens zinc fingers and
           homeoboxes 3 protein.
          Length = 166

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 11  LYLCKYCKWRIDKLLRFIRQCHLASEMVWRDLKKVRIHIGCSLL 142
           LY CKYC +R   + +F+   H+ SE    +     +  GCS L
Sbjct: 76  LYSCKYCDFRSHDMTQFVG--HMNSEHTDFNKDPTFVCSGCSFL 117


>AL022394-7|CAI42888.1|  498|Homo sapiens zinc fingers and
           homeoboxes 3 protein.
          Length = 498

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 11  LYLCKYCKWRIDKLLRFIRQCHLASEMVWRDLKKVRIHIGCSLL 142
           LY CKYC +R   + +F+   H+ SE    +     +  GCS L
Sbjct: 76  LYSCKYCDFRSHDMTQFVG--HMNSEHTDFNKDPTFVCSGCSFL 117


>AL022394-5|CAA18538.1|  956|Homo sapiens zinc fingers and
           homeoboxes 3 protein.
          Length = 956

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 11  LYLCKYCKWRIDKLLRFIRQCHLASEMVWRDLKKVRIHIGCSLL 142
           LY CKYC +R   + +F+   H+ SE    +     +  GCS L
Sbjct: 76  LYSCKYCDFRSHDMTQFVG--HMNSEHTDFNKDPTFVCSGCSFL 117


>AB081948-1|BAC65211.1|  956|Homo sapiens transcription factor ZHX3
           protein.
          Length = 956

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 11  LYLCKYCKWRIDKLLRFIRQCHLASEMVWRDLKKVRIHIGCSLL 142
           LY CKYC +R   + +F+   H+ SE    +     +  GCS L
Sbjct: 76  LYSCKYCDFRSHDMTQFVG--HMNSEHTDFNKDPTFVCSGCSFL 117


>AB007855-1|BAA23691.3| 1003|Homo sapiens KIAA0395 protein protein.
          Length = 1003

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 11  LYLCKYCKWRIDKLLRFIRQCHLASEMVWRDLKKVRIHIGCSLL 142
           LY CKYC +R   + +F+   H+ SE    +     +  GCS L
Sbjct: 123 LYSCKYCDFRSHDMTQFVG--HMNSEHTDFNKDPTFVCSGCSFL 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,645,044
Number of Sequences: 237096
Number of extensions: 971116
Number of successful extensions: 1794
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1793
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)