Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15p22
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3694|AAF56383.3|  331|Drosophila melanogaster CG31107-P...    31   2.0  
M82887-1|AAB59218.1|  640|Drosophila melanogaster dual bar prote...    29   4.7  
M82884-1|AAA28383.2|  645|Drosophila melanogaster dual bar prote...    29   8.1  
BT022144-1|AAY51539.1|  645|Drosophila melanogaster IP01479p pro...    29   8.1  
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    29   8.1  
AE014298-2565|AAF48725.1|  645|Drosophila melanogaster CG5488-PA...    29   8.1  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    29   8.1  

>AE014297-3694|AAF56383.3|  331|Drosophila melanogaster CG31107-PA
           protein.
          Length = 331

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 113 GNYNFN*CSRFYSFIFTIVCNILFRNIKRTXNNIRTS 3
           G + +N  + +Y F F I C+  + N     NNI TS
Sbjct: 13  GTFYYNRSNNYYLFFFVISCDCNYTNTYAKPNNISTS 49


>M82887-1|AAB59218.1|  640|Drosophila melanogaster dual bar protein
           protein.
          Length = 640

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = -1

Query: 604 DSVHQQGVVRVHSAAGQWKIVHGHHEQP*QTHKTAFEQTRRQVFAQRNQFT--ARVSQRE 431
           DS  +Q +V  H    Q +  H HH+Q  Q H+ A  Q   Q   Q+ Q     R  +RE
Sbjct: 96  DSEREQSLVAQHHHHHQQQQQHHHHQQQ-QQHQQAALQ---QYIVQQQQLLRFERERERE 151

Query: 430 RVRLQNRRPH 401
           R R   R  H
Sbjct: 152 REREHYRERH 161


>M82884-1|AAA28383.2|  645|Drosophila melanogaster dual bar protein
           protein.
          Length = 645

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = -1

Query: 604 DSVHQQGVVRVHSAAGQWKIVHGHHEQP*QTHKTAFEQTRRQVFAQRNQFT--ARVSQRE 431
           DS  +Q +V  H    Q +  H HH+Q  Q  +   +   +Q   Q+ Q     R  +RE
Sbjct: 96  DSEREQSLVAQHHHHHQQQQQHHHHQQQ-QQQQQHQQAALQQYIVQQQQLLRFERERERE 154

Query: 430 RVRLQNRRPH 401
           R R   R  H
Sbjct: 155 REREHYRERH 164


>BT022144-1|AAY51539.1|  645|Drosophila melanogaster IP01479p
           protein.
          Length = 645

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = -1

Query: 604 DSVHQQGVVRVHSAAGQWKIVHGHHEQP*QTHKTAFEQTRRQVFAQRNQFT--ARVSQRE 431
           DS  +Q +V  H    Q +  H HH+Q  Q  +   +   +Q   Q+ Q     R  +RE
Sbjct: 96  DSEREQSLVAQHHHHHQQQQQHHHHQQQ-QQQQQHQQAALQQYIVQQQQLLRFERERERE 154

Query: 430 RVRLQNRRPH 401
           R R   R  H
Sbjct: 155 REREHYRERH 164


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -1

Query: 286   DVPYYRLGNHEKVEYI--PLKLALNDDITSEPQ-QFSEPVYKMP 164
             ++P   L  +EKVE    P+KL ++D I  EP+   S+P+  +P
Sbjct: 12668 EIPKVDLEKYEKVEMPEKPVKLTVSDSIPEEPKPDKSQPISVLP 12711


>AE014298-2565|AAF48725.1|  645|Drosophila melanogaster CG5488-PA
           protein.
          Length = 645

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = -1

Query: 604 DSVHQQGVVRVHSAAGQWKIVHGHHEQP*QTHKTAFEQTRRQVFAQRNQFT--ARVSQRE 431
           DS  +Q +V  H    Q +  H HH+Q  Q  +   +   +Q   Q+ Q     R  +RE
Sbjct: 96  DSEREQSLVAQHHHHHQQQQQHHHHQQQ-QQQQQHQQAALQQYIVQQQQLLRFERERERE 154

Query: 430 RVRLQNRRPH 401
           R R   R  H
Sbjct: 155 REREHYRERH 164


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
             isoform C protein.
          Length = 18074

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -1

Query: 286   DVPYYRLGNHEKVEYI--PLKLALNDDITSEPQ-QFSEPVYKMP 164
             ++P   L  +EKVE    P+KL ++D I  EP+   S+P+  +P
Sbjct: 14527 EIPKVDLEKYEKVEMPEKPVKLTVSDSIPEEPKPDKSQPISVLP 14570


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,576,195
Number of Sequences: 53049
Number of extensions: 543161
Number of successful extensions: 1644
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)