Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15p13
(710 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 25 0.53
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 25 0.53
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 25 0.53
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.6
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 2.9
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 2.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 5.0
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 6.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 6.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 6.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 6.6
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 21 8.7
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 25.4 bits (53), Expect = 0.53
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 272 SDGELKATVVETLTGRESMIGGGDYDCVTCCGLSLCDHL 388
SD +K TVV + + ++G ++ CV C + + +L
Sbjct: 317 SDSVIKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYL 355
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 25.4 bits (53), Expect = 0.53
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 272 SDGELKATVVETLTGRESMIGGGDYDCVTCCGLSLCDHL 388
SD +K TVV + + ++G ++ CV C + + +L
Sbjct: 232 SDSVIKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYL 270
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 25.4 bits (53), Expect = 0.53
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 272 SDGELKATVVETLTGRESMIGGGDYDCVTCCGLSLCDHL 388
SD +K TVV + + ++G ++ CV C + + +L
Sbjct: 551 SDSVIKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYL 589
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 499 FRATHTLRMLPYLENIFSISYLDALVPKLPTYTLQERSHS 618
FR+ T +M P+++ +F LV + P Y + +S
Sbjct: 333 FRSPQTHKMAPWVKRVFIHILPRLLVMRRPQYKFETNRYS 372
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 499 FRATHTLRMLPYLENIFSISYLDALVPKLPTYTLQERSHS 618
FR+ T +M P+++ +F LV + P Y + +S
Sbjct: 333 FRSPQTHKMAPWVKRVFIHILPRLLVMRRPQYKFETNRYS 372
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 656 PPLSIKTKMSRYREWDLSCKVY 591
P L I + M R W++ C VY
Sbjct: 111 PMLVISSFMERMIGWEIGCDVY 132
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 656 PPLSIKTKMSRYREWDLSCKVY 591
P L I + M R W++ C VY
Sbjct: 111 PMLVISSFMERMIGWEIGCDVY 132
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.0
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S+ + SNS++ H F H
Sbjct: 174 KINKIKEHDTVLVVNIEKSENESKKYATSSNSLRNRTHGFQH 215
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S + SNS++ H F H
Sbjct: 174 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQH 215
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S + SNS++ H F H
Sbjct: 174 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQH 215
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S + SNS++ H F H
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S + SNS++ H F H
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S + SNS++ H F H
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S + SNS++ H F H
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S + SNS++ H F H
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S + SNS++ H F H
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S + SNS++ H F H
Sbjct: 174 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQH 215
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S + SNS++ H F H
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S + SNS++ H F H
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S + SNS++ H F H
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 21 KINEVSDLNTYKSFRLMFSKTANAGCIIISNSIQITPHAFSH 146
KIN++ + +T + S + SNS++ H F H
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTHGFQH 226
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2
Query: 601 AKCTWATWVLMRLNMK 554
+KCTW R+N+K
Sbjct: 68 SKCTWTITSYHRINLK 83
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,258
Number of Sequences: 438
Number of extensions: 3283
Number of successful extensions: 25
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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