Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15p08
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 189 6e-48
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 189 6e-48
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 189 6e-48
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 189 6e-48
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 189 6e-48
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 189 6e-48
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 189 6e-48
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 189 6e-48
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 189 6e-48
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 189 6e-48
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 180 5e-45
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 179 6e-45
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 126 6e-29
Y14946-1|CAA75163.1| 957|Homo sapiens SPIN protein protein. 31 3.2
U77948-1|AAB48826.1| 957|Homo sapiens Bruton's tyrosine kinase-... 31 3.2
BC099907-1|AAH99907.1| 976|Homo sapiens general transcription f... 31 3.2
BC070484-1|AAH70484.1| 957|Homo sapiens general transcription f... 31 3.2
AF038969-1|AAC08315.1| 957|Homo sapiens general transcription f... 31 3.2
AF038968-1|AAC08314.1| 977|Homo sapiens general transcription f... 31 3.2
AF038967-1|AAC08313.1| 978|Homo sapiens general transcription f... 31 3.2
AF035737-1|AAC08312.1| 998|Homo sapiens general transcription f... 31 3.2
AF015553-1|AAB70791.1| 957|Homo sapiens TFII-I protein protein. 31 3.2
AC083884-4|AAS07464.1| 957|Homo sapiens unknown protein. 31 3.2
AC083884-3|AAS07462.1| 978|Homo sapiens unknown protein. 31 3.2
AC083884-2|AAS07463.1| 977|Homo sapiens unknown protein. 31 3.2
AC083884-1|AAS07461.1| 998|Homo sapiens unknown protein. 31 3.2
AC004883-1|AAL93085.1| 998|Homo sapiens general transcription f... 31 3.2
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 4.3
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 31 4.3
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 4.3
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 31 4.3
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 4.3
U16738-1|AAC16021.1| 213|Homo sapiens CAG-isl 7 protein. 30 5.6
D87735-1|BAA13443.1| 220|Homo sapiens ribosomal protein L14 pro... 30 5.6
DQ118667-1|AAZ38460.1| 215|Homo sapiens CAG-ISL 7 protein. 30 5.6
BC071913-1|AAH71913.1| 220|Homo sapiens RPL14 protein protein. 30 5.6
BC029036-1|AAH29036.1| 217|Homo sapiens ribosomal protein L14 p... 30 5.6
BC022805-1|AAH22805.1| 216|Homo sapiens Unknown (protein for IM... 30 5.6
BC019651-1|AAH19651.1| 219|Homo sapiens RPL14 protein protein. 30 5.6
BC016379-1|AAH16379.1| 124|Homo sapiens Unknown (protein for IM... 30 5.6
BC009294-1|AAH09294.1| 218|Homo sapiens RPL14 protein protein. 30 5.6
BC005134-1|AAH05134.1| 222|Homo sapiens RPL14 protein protein. 30 5.6
BC000606-1|AAH00606.1| 216|Homo sapiens ribosomal protein L14 p... 30 5.6
AK223111-1|BAD96831.1| 218|Homo sapiens ribosomal protein L14 v... 30 5.6
AK222750-1|BAD96470.1| 220|Homo sapiens ribosomal protein L14 v... 30 5.6
AB061822-1|BAB79460.1| 220|Homo sapiens ribosomal protein L14 p... 30 5.6
AK125338-1|BAC86136.1| 161|Homo sapiens protein ( Homo sapiens ... 29 9.9
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 189 bits (461), Expect = 6e-48
Identities = 99/206 (48%), Positives = 131/206 (63%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 KKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKI 440
K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++
Sbjct: 87 KVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITP 146
Query: 439 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 260
GT+ I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N
Sbjct: 147 GTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNV 206
Query: 259 KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIG 80
K+PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I
Sbjct: 207 KIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262
Query: 79 ARPDKKMLRGYLKAAFGLRSSQYPHR 2
A P L+GYL++ F L + YPH+
Sbjct: 263 AIP---QLQGYLRSVFALTNGIYPHK 285
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 189 bits (461), Expect = 6e-48
Identities = 99/206 (48%), Positives = 131/206 (63%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 KKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKI 440
K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++
Sbjct: 87 KVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITP 146
Query: 439 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 260
GT+ I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N
Sbjct: 147 GTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNV 206
Query: 259 KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIG 80
K+PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I
Sbjct: 207 KIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262
Query: 79 ARPDKKMLRGYLKAAFGLRSSQYPHR 2
A P L+GYL++ F L + YPH+
Sbjct: 263 AIP---QLQGYLRSVFALTNGIYPHK 285
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 189 bits (461), Expect = 6e-48
Identities = 99/206 (48%), Positives = 131/206 (63%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 KKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKI 440
K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++
Sbjct: 87 KVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITP 146
Query: 439 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 260
GT+ I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N
Sbjct: 147 GTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNV 206
Query: 259 KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIG 80
K+PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I
Sbjct: 207 KIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262
Query: 79 ARPDKKMLRGYLKAAFGLRSSQYPHR 2
A P L+GYL++ F L + YPH+
Sbjct: 263 AIP---QLQGYLRSVFALTNGIYPHK 285
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 189 bits (461), Expect = 6e-48
Identities = 99/206 (48%), Positives = 131/206 (63%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 KKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKI 440
K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++
Sbjct: 87 KVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITP 146
Query: 439 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 260
GT+ I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N
Sbjct: 147 GTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNV 206
Query: 259 KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIG 80
K+PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I
Sbjct: 207 KIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262
Query: 79 ARPDKKMLRGYLKAAFGLRSSQYPHR 2
A P L+GYL++ F L + YPH+
Sbjct: 263 AIP---QLQGYLRSVFALTNGIYPHK 285
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 189 bits (461), Expect = 6e-48
Identities = 99/206 (48%), Positives = 131/206 (63%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 KKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKI 440
K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++
Sbjct: 87 KVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITP 146
Query: 439 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 260
GT+ I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N
Sbjct: 147 GTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNV 206
Query: 259 KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIG 80
K+PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I
Sbjct: 207 KIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262
Query: 79 ARPDKKMLRGYLKAAFGLRSSQYPHR 2
A P L+GYL++ F L + YPH+
Sbjct: 263 AIP---QLQGYLRSVFALTNGIYPHK 285
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 189 bits (461), Expect = 6e-48
Identities = 99/206 (48%), Positives = 131/206 (63%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 KKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKI 440
K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++
Sbjct: 87 KVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITP 146
Query: 439 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 260
GT+ I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N
Sbjct: 147 GTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNV 206
Query: 259 KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIG 80
K+PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I
Sbjct: 207 KIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262
Query: 79 ARPDKKMLRGYLKAAFGLRSSQYPHR 2
A P L+GYL++ F L + YPH+
Sbjct: 263 AIP---QLQGYLRSVFALTNGIYPHK 285
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 189 bits (461), Expect = 6e-48
Identities = 99/206 (48%), Positives = 131/206 (63%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 KKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKI 440
K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++
Sbjct: 87 KVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITP 146
Query: 439 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 260
GT+ I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N
Sbjct: 147 GTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNV 206
Query: 259 KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIG 80
K+PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I
Sbjct: 207 KIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262
Query: 79 ARPDKKMLRGYLKAAFGLRSSQYPHR 2
A P L+GYL++ F L + YPH+
Sbjct: 263 AIP---QLQGYLRSVFALTNGIYPHK 285
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 189 bits (461), Expect = 6e-48
Identities = 99/206 (48%), Positives = 131/206 (63%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 KKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKI 440
K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++
Sbjct: 87 KVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITP 146
Query: 439 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 260
GT+ I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N
Sbjct: 147 GTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNV 206
Query: 259 KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIG 80
K+PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I
Sbjct: 207 KIPKHLTDAYF---KKKKLRKPRRQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262
Query: 79 ARPDKKMLRGYLKAAFGLRSSQYPHR 2
A P L+GYL++ F L + YPH+
Sbjct: 263 AIP---QLQGYLRSVFALTNGIYPHK 285
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 189 bits (461), Expect = 6e-48
Identities = 99/206 (48%), Positives = 131/206 (63%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 KKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKI 440
K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++
Sbjct: 87 KVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITP 146
Query: 439 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 260
GT+ I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N
Sbjct: 147 GTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNV 206
Query: 259 KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIG 80
K+PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I
Sbjct: 207 KIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262
Query: 79 ARPDKKMLRGYLKAAFGLRSSQYPHR 2
A P L+GYL++ F L + YPH+
Sbjct: 263 AIP---QLQGYLRSVFALTNGIYPHK 285
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 189 bits (461), Expect = 6e-48
Identities = 99/206 (48%), Positives = 131/206 (63%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 KKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKI 440
K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++
Sbjct: 87 KVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITP 146
Query: 439 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 260
GT+ I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N
Sbjct: 147 GTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNV 206
Query: 259 KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIG 80
K+PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I
Sbjct: 207 KIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262
Query: 79 ARPDKKMLRGYLKAAFGLRSSQYPHR 2
A P L+GYL++ F L + YPH+
Sbjct: 263 AIP---QLQGYLRSVFALTNGIYPHK 285
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 180 bits (437), Expect = 5e-45
Identities = 97/207 (46%), Positives = 129/207 (62%), Gaps = 3/207 (1%)
Frame = -1
Query: 613 KKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKI 440
K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++
Sbjct: 87 KVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITP 146
Query: 439 GTVCILLAGRHAGKR-VVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGN 263
GT+ I+L GR GK VV + L SGLLLVTGP N PLRR Q++VI TST+I + N
Sbjct: 147 GTILIILTGRRRGKNWVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISN 206
Query: 262 FKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAI 83
K+PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I
Sbjct: 207 VKIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKI 262
Query: 82 GARPDKKMLRGYLKAAFGLRSSQYPHR 2
A P L+GYL++ F L + YPH+
Sbjct: 263 KAIP---QLQGYLRSVFALTNGIYPHK 286
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 179 bits (436), Expect = 6e-45
Identities = 96/206 (46%), Positives = 130/206 (63%), Gaps = 2/206 (0%)
Frame = -1
Query: 613 KKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKI 440
K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++
Sbjct: 87 KVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITP 146
Query: 439 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 260
GT+ I+L GRH GKRVV + L SGLLLVT ++ PLRR Q++VI TST+I + N
Sbjct: 147 GTILIILTGRHRGKRVVFLKQLASGLLLVTDLWSSIEVPLRRTHQKFVIATSTKIDISNV 206
Query: 259 KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIG 80
K+PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I
Sbjct: 207 KIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262
Query: 79 ARPDKKMLRGYLKAAFGLRSSQYPHR 2
A P L+GYL++ F L + YPH+
Sbjct: 263 AIP---QLQGYLRSVFALTNGIYPHK 285
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 126 bits (304), Expect = 6e-29
Identities = 72/169 (42%), Positives = 96/169 (56%), Gaps = 2/169 (1%)
Frame = -1
Query: 613 KKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKI 440
K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++
Sbjct: 26 KVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITP 85
Query: 439 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF 260
GT+ I+L GRH GKRVV + L SGLLLVTGP + + +
Sbjct: 86 GTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVSIEFLYEEHTRNLSLPLQPKSISAIV 145
Query: 259 KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQK 113
K+PKH D YF +EG +IF T+KEKY +EQRK DQK
Sbjct: 146 KIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQK 190
>Y14946-1|CAA75163.1| 957|Homo sapiens SPIN protein protein.
Length = 957
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 330 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 382
>U77948-1|AAB48826.1| 957|Homo sapiens Bruton's tyrosine
kinase-associated protein-135 protein.
Length = 957
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 330 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 382
>BC099907-1|AAH99907.1| 976|Homo sapiens general transcription
factor II, i protein.
Length = 976
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 349 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 401
>BC070484-1|AAH70484.1| 957|Homo sapiens general transcription
factor II, i protein.
Length = 957
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 330 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 382
>AF038969-1|AAC08315.1| 957|Homo sapiens general transcription
factor 2-I protein.
Length = 957
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 330 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 382
>AF038968-1|AAC08314.1| 977|Homo sapiens general transcription
factor 2-I protein.
Length = 977
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 350 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 402
>AF038967-1|AAC08313.1| 978|Homo sapiens general transcription
factor 2-I protein.
Length = 978
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 351 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 403
>AF035737-1|AAC08312.1| 998|Homo sapiens general transcription
factor 2-I; alternative splice product protein.
Length = 998
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 371 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 423
>AF015553-1|AAB70791.1| 957|Homo sapiens TFII-I protein protein.
Length = 957
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 330 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 382
>AC083884-4|AAS07464.1| 957|Homo sapiens unknown protein.
Length = 957
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 330 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 382
>AC083884-3|AAS07462.1| 978|Homo sapiens unknown protein.
Length = 978
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 351 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 403
>AC083884-2|AAS07463.1| 977|Homo sapiens unknown protein.
Length = 977
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 350 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 402
>AC083884-1|AAS07461.1| 998|Homo sapiens unknown protein.
Length = 998
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 371 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 423
>AC004883-1|AAL93085.1| 998|Homo sapiens general transcription
factor 2I protein.
Length = 998
Score = 31.1 bits (67), Expect = 3.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 RRNGHELKAKGPVTKSRPLGRIPTSTTL---LPACLPARRMQTVPIFRLGRIL 464
R+ +KAKGPVT PL + LP +P RR T I RL RIL
Sbjct: 371 RKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERIL 423
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 30.7 bits (66), Expect = 4.3
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -2
Query: 294 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 115
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 1682 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 1737
Query: 114 R-QSTRL*SKPSEPDPTRRCSADTSRRPSDSAR 19
+ +S+R + S P + ++ R PS R
Sbjct: 1738 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 1768
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 30.7 bits (66), Expect = 4.3
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -2
Query: 294 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 115
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 714 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 769
Query: 114 R-QSTRL*SKPSEPDPTRRCSADTSRRPSDSAR 19
+ +S+R + S P + ++ R PS R
Sbjct: 770 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 800
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 30.7 bits (66), Expect = 4.3
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -2
Query: 294 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 115
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 1682 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 1737
Query: 114 R-QSTRL*SKPSEPDPTRRCSADTSRRPSDSAR 19
+ +S+R + S P + ++ R PS R
Sbjct: 1738 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 1768
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 30.7 bits (66), Expect = 4.3
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -2
Query: 294 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 115
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 205 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 260
Query: 114 R-QSTRL*SKPSEPDPTRRCSADTSRRPSDSAR 19
+ +S+R + S P + ++ R PS R
Sbjct: 261 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 291
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.7 bits (66), Expect = 4.3
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -2
Query: 294 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 115
S PP S+ S+ + T SRR RSAS+ R P + R + +SS +P
Sbjct: 1730 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT----PPRHRRSPSVSSPEPAE 1785
Query: 114 R-QSTRL*SKPSEPDPTRRCSADTSRRPSDSAR 19
+ +S+R + S P + ++ R PS R
Sbjct: 1786 KSRSSR--RRRSASSPRTKTTSRRGRSPSPKPR 1816
>U16738-1|AAC16021.1| 213|Homo sapiens CAG-isl 7 protein.
Length = 213
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 7 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 41
>D87735-1|BAA13443.1| 220|Homo sapiens ribosomal protein L14
protein.
Length = 220
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 7 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 41
>DQ118667-1|AAZ38460.1| 215|Homo sapiens CAG-ISL 7 protein.
Length = 215
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 7 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 41
>BC071913-1|AAH71913.1| 220|Homo sapiens RPL14 protein protein.
Length = 220
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 7 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 41
>BC029036-1|AAH29036.1| 217|Homo sapiens ribosomal protein L14
protein.
Length = 217
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 7 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 41
>BC022805-1|AAH22805.1| 216|Homo sapiens Unknown (protein for
IMAGE:5426295) protein.
Length = 216
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 6 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 40
>BC019651-1|AAH19651.1| 219|Homo sapiens RPL14 protein protein.
Length = 219
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 7 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 41
>BC016379-1|AAH16379.1| 124|Homo sapiens Unknown (protein for
IMAGE:4667300) protein.
Length = 124
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 7 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 41
>BC009294-1|AAH09294.1| 218|Homo sapiens RPL14 protein protein.
Length = 218
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 7 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 41
>BC005134-1|AAH05134.1| 222|Homo sapiens RPL14 protein protein.
Length = 222
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 7 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 41
>BC000606-1|AAH00606.1| 216|Homo sapiens ribosomal protein L14
protein.
Length = 216
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 7 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 41
>AK223111-1|BAD96831.1| 218|Homo sapiens ribosomal protein L14
variant protein.
Length = 218
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 7 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 41
>AK222750-1|BAD96470.1| 220|Homo sapiens ribosomal protein L14
variant protein.
Length = 220
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 7 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 41
>AB061822-1|BAB79460.1| 220|Homo sapiens ribosomal protein L14
protein.
Length = 220
Score = 30.3 bits (65), Expect = 5.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 448 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 344
+++G V + G HAGK V +V ++ LV GP
Sbjct: 7 VEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGP 41
>AK125338-1|BAC86136.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ43348 fis, clone NT2RI3008974, moderately
similar to Probable transposase. ).
Length = 161
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 509 FLLSGVEGL-PTFEGYCSGSPILLTSNLLYNN 601
F +S E L PT E YCSG IL LL++N
Sbjct: 60 FTISFTEYLKPTTENYCSGKKILFKIVLLFDN 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,425,013
Number of Sequences: 237096
Number of extensions: 2328849
Number of successful extensions: 9795
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 9470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9755
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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