Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15p02
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L12535-1|AAA60292.1|  277|Homo sapiens RSU-1 protein.                 104   2e-22
CR541840-1|CAG46639.1|  277|Homo sapiens RSU1 protein.                104   2e-22
CR536521-1|CAG38758.1|  277|Homo sapiens RSU1 protein.                104   2e-22
BC107898-1|AAI07899.1|  280|Homo sapiens RSU1 protein protein.        104   2e-22
BC015644-1|AAH15644.1|  277|Homo sapiens Ras suppressor protein ...   104   2e-22
BC008691-1|AAH08691.1|  277|Homo sapiens RSU1 protein protein.        104   2e-22
BC005993-1|AAH05993.1|  277|Homo sapiens Ras suppressor protein ...   104   2e-22
AL365215-3|CAH73633.1|  277|Homo sapiens Ras suppressor protein ...   104   2e-22
AL365215-2|CAH73632.1|  224|Homo sapiens Ras suppressor protein ...   104   2e-22

>L12535-1|AAA60292.1|  277|Homo sapiens RSU-1 protein.
          Length = 277

 Score =  104 bits (250), Expect = 2e-22
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = -1

Query: 647 VLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAK 468
           VLPPE+G LDL   K V + E N WV PI DQ +LG SHV +Y+RSETYK LY RHM A 
Sbjct: 194 VLPPELGNLDLTGQKQVFKAENNPWVTPIADQFQLGVSHVFEYIRSETYKYLYGRHMQAN 253

Query: 467 PPPPPQTVDKSKKASR 420
           P PP +  DKSKK SR
Sbjct: 254 PEPPKKNNDKSKKISR 269


>CR541840-1|CAG46639.1|  277|Homo sapiens RSU1 protein.
          Length = 277

 Score =  104 bits (250), Expect = 2e-22
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = -1

Query: 647 VLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAK 468
           VLPPE+G LDL   K V + E N WV PI DQ +LG SHV +Y+RSETYK LY RHM A 
Sbjct: 194 VLPPELGNLDLTGQKQVFKAENNPWVTPIADQFQLGVSHVFEYIRSETYKYLYGRHMQAN 253

Query: 467 PPPPPQTVDKSKKASR 420
           P PP +  DKSKK SR
Sbjct: 254 PEPPKKNNDKSKKISR 269


>CR536521-1|CAG38758.1|  277|Homo sapiens RSU1 protein.
          Length = 277

 Score =  104 bits (250), Expect = 2e-22
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = -1

Query: 647 VLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAK 468
           VLPPE+G LDL   K V + E N WV PI DQ +LG SHV +Y+RSETYK LY RHM A 
Sbjct: 194 VLPPELGNLDLTGQKQVFKAENNPWVTPIADQFQLGVSHVFEYIRSETYKYLYGRHMQAN 253

Query: 467 PPPPPQTVDKSKKASR 420
           P PP +  DKSKK SR
Sbjct: 254 PEPPKKNNDKSKKISR 269


>BC107898-1|AAI07899.1|  280|Homo sapiens RSU1 protein protein.
          Length = 280

 Score =  104 bits (250), Expect = 2e-22
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = -1

Query: 647 VLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAK 468
           VLPPE+G LDL   K V + E N WV PI DQ +LG SHV +Y+RSETYK LY RHM A 
Sbjct: 197 VLPPELGNLDLTGQKQVFKAENNPWVTPIADQFQLGVSHVFEYIRSETYKYLYGRHMQAN 256

Query: 467 PPPPPQTVDKSKKASR 420
           P PP +  DKSKK SR
Sbjct: 257 PEPPKKNNDKSKKISR 272


>BC015644-1|AAH15644.1|  277|Homo sapiens Ras suppressor protein 1
           protein.
          Length = 277

 Score =  104 bits (250), Expect = 2e-22
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = -1

Query: 647 VLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAK 468
           VLPPE+G LDL   K V + E N WV PI DQ +LG SHV +Y+RSETYK LY RHM A 
Sbjct: 194 VLPPELGNLDLTGQKQVFKAENNPWVTPIADQFQLGVSHVFEYIRSETYKYLYGRHMQAN 253

Query: 467 PPPPPQTVDKSKKASR 420
           P PP +  DKSKK SR
Sbjct: 254 PEPPKKNNDKSKKISR 269


>BC008691-1|AAH08691.1|  277|Homo sapiens RSU1 protein protein.
          Length = 277

 Score =  104 bits (250), Expect = 2e-22
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = -1

Query: 647 VLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAK 468
           VLPPE+G LDL   K V + E N WV PI DQ +LG SHV +Y+RSETYK LY RHM A 
Sbjct: 194 VLPPELGNLDLTGQKQVFKAENNPWVTPIADQFQLGVSHVFEYIRSETYKYLYGRHMQAN 253

Query: 467 PPPPPQTVDKSKKASR 420
           P PP +  DKSKK SR
Sbjct: 254 PEPPKKNNDKSKKISR 269


>BC005993-1|AAH05993.1|  277|Homo sapiens Ras suppressor protein 1
           protein.
          Length = 277

 Score =  104 bits (250), Expect = 2e-22
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = -1

Query: 647 VLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAK 468
           VLPPE+G LDL   K V + E N WV PI DQ +LG SHV +Y+RSETYK LY RHM A 
Sbjct: 194 VLPPELGNLDLTGQKQVFKAENNPWVTPIADQFQLGVSHVFEYIRSETYKYLYGRHMQAN 253

Query: 467 PPPPPQTVDKSKKASR 420
           P PP +  DKSKK SR
Sbjct: 254 PEPPKKNNDKSKKISR 269


>AL365215-3|CAH73633.1|  277|Homo sapiens Ras suppressor protein 1
           protein.
          Length = 277

 Score =  104 bits (250), Expect = 2e-22
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = -1

Query: 647 VLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAK 468
           VLPPE+G LDL   K V + E N WV PI DQ +LG SHV +Y+RSETYK LY RHM A 
Sbjct: 194 VLPPELGNLDLTGQKQVFKAENNPWVTPIADQFQLGVSHVFEYIRSETYKYLYGRHMQAN 253

Query: 467 PPPPPQTVDKSKKASR 420
           P PP +  DKSKK SR
Sbjct: 254 PEPPKKNNDKSKKISR 269


>AL365215-2|CAH73632.1|  224|Homo sapiens Ras suppressor protein 1
           protein.
          Length = 224

 Score =  104 bits (250), Expect = 2e-22
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = -1

Query: 647 VLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAK 468
           VLPPE+G LDL   K V + E N WV PI DQ +LG SHV +Y+RSETYK LY RHM A 
Sbjct: 141 VLPPELGNLDLTGQKQVFKAENNPWVTPIADQFQLGVSHVFEYIRSETYKYLYGRHMQAN 200

Query: 467 PPPPPQTVDKSKKASR 420
           P PP +  DKSKK SR
Sbjct: 201 PEPPKKNNDKSKKISR 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,211,863
Number of Sequences: 237096
Number of extensions: 1740688
Number of successful extensions: 5437
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5411
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)