Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15p02
(650 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118581-1|AAM49950.1| 272|Drosophila melanogaster LD43891p pro... 103 2e-22
AE014134-2378|AAF53320.2| 283|Drosophila melanogaster CG9031-PA... 103 2e-22
AY119139-1|AAM50999.1| 615|Drosophila melanogaster RE41430p pro... 30 3.1
AE014298-1780|AAF48175.2| 615|Drosophila melanogaster CG11138-P... 30 3.1
BT029260-1|ABK30897.1| 469|Drosophila melanogaster FI01124p pro... 29 5.5
AY094704-1|AAM11057.1| 311|Drosophila melanogaster GH11346p pro... 29 5.5
AY058765-1|AAL13994.1| 469|Drosophila melanogaster SD03430p pro... 29 5.5
AM293893-1|CAL25816.1| 311|Drosophila melanogaster CG18418 prot... 29 5.5
AM293892-1|CAL25815.1| 311|Drosophila melanogaster CG18418 prot... 29 5.5
AM293891-1|CAL25814.1| 311|Drosophila melanogaster CG18418 prot... 29 5.5
AM293890-1|CAL25813.1| 311|Drosophila melanogaster CG18418 prot... 29 5.5
AM293889-1|CAL25812.1| 311|Drosophila melanogaster CG18418 prot... 29 5.5
AM293888-1|CAL25811.1| 311|Drosophila melanogaster CG18418 prot... 29 5.5
AM293887-1|CAL25810.1| 311|Drosophila melanogaster CG18418 prot... 29 5.5
AM293886-1|CAL25809.1| 311|Drosophila melanogaster CG18418 prot... 29 5.5
AM293885-1|CAL25808.1| 311|Drosophila melanogaster CG18418 prot... 29 5.5
AM293883-1|CAL25806.1| 311|Drosophila melanogaster CG18418 prot... 29 5.5
AM293882-1|CAL25805.1| 311|Drosophila melanogaster CG18418 prot... 29 5.5
AE014296-894|AAF47932.1| 311|Drosophila melanogaster CG18418-PA... 29 5.5
AE014134-2141|AAF53152.2| 469|Drosophila melanogaster CG6792-PA... 29 5.5
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro... 22 5.5
BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p pro... 22 5.6
U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino pro... 22 5.6
AM293884-1|CAL25807.1| 311|Drosophila melanogaster CG18418 prot... 29 7.2
AE014296-1467|AAF50407.1| 681|Drosophila melanogaster CG6765-PA... 29 7.2
AY071500-1|AAL49122.1| 514|Drosophila melanogaster RE55842p pro... 28 9.6
AY058605-1|AAL13834.1| 585|Drosophila melanogaster LD29807p pro... 28 9.6
AE014297-2565|AAF55582.1| 726|Drosophila melanogaster CG7706-PA... 28 9.6
AE014297-1038|AAF54448.2| 514|Drosophila melanogaster CG12946-P... 28 9.6
AE014297-1037|ABI31156.1| 630|Drosophila melanogaster CG12946-P... 28 9.6
AE014134-1406|AAF52606.2| 585|Drosophila melanogaster CG8668-PA... 28 9.6
>AY118581-1|AAM49950.1| 272|Drosophila melanogaster LD43891p
protein.
Length = 272
Score = 103 bits (248), Expect = 2e-22
Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -1
Query: 647 VLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSA- 471
VLPPEI LDL SNKSV+++E N WV PI +Q LG SHV+DYL++ETYK++Y+RH+ A
Sbjct: 193 VLPPEIAQLDLLSNKSVMKMEENPWVNPIAEQYLLGISHVIDYLKTETYKIIYNRHLQAG 252
Query: 470 KPPPPPQTVDKSKKASR 420
+ PPP DKSKKASR
Sbjct: 253 RSGPPPPKADKSKKASR 269
>AE014134-2378|AAF53320.2| 283|Drosophila melanogaster CG9031-PA
protein.
Length = 283
Score = 103 bits (248), Expect = 2e-22
Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -1
Query: 647 VLPPEIGTLDLASNKSVLRLEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSA- 471
VLPPEI LDL SNKSV+++E N WV PI +Q LG SHV+DYL++ETYK++Y+RH+ A
Sbjct: 204 VLPPEIAQLDLLSNKSVMKMEENPWVNPIAEQYLLGISHVIDYLKTETYKIIYNRHLQAG 263
Query: 470 KPPPPPQTVDKSKKASR 420
+ PPP DKSKKASR
Sbjct: 264 RSGPPPPKADKSKKASR 280
>AY119139-1|AAM50999.1| 615|Drosophila melanogaster RE41430p
protein.
Length = 615
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -3
Query: 600 SAEAGR*LLGSAHRRPAQAGAVPRAGLSALRDLQSPVQPP 481
S GR L PA VP LS LRD Q PV+ P
Sbjct: 278 SGVGGRPPLTRGESLPAAVSYVPERQLSGLRDKQQPVRAP 317
>AE014298-1780|AAF48175.2| 615|Drosophila melanogaster CG11138-PC,
isoform C protein.
Length = 615
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -3
Query: 600 SAEAGR*LLGSAHRRPAQAGAVPRAGLSALRDLQSPVQPP 481
S GR L PA VP LS LRD Q PV+ P
Sbjct: 278 SGVGGRPPLTRGESLPAAVSYVPERQLSGLRDKQQPVRAP 317
>BT029260-1|ABK30897.1| 469|Drosophila melanogaster FI01124p
protein.
Length = 469
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 381 RDY*RFLTRCDDEIMKINKSHSLTHGEPGPDRHTC-TCLYSLNR*EQVAKY 232
RD+ + C K K H+L H E GP+R+ C C +S +R +++ ++
Sbjct: 353 RDFICEVCGCKFSQSKNLKRHALKHTENGPNRYKCQLCGFSSHRSDKMKEH 403
>AY094704-1|AAM11057.1| 311|Drosophila melanogaster GH11346p
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYSGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AY058765-1|AAL13994.1| 469|Drosophila melanogaster SD03430p
protein.
Length = 469
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 381 RDY*RFLTRCDDEIMKINKSHSLTHGEPGPDRHTC-TCLYSLNR*EQVAKY 232
RD+ + C K K H+L H E GP+R+ C C +S +R +++ ++
Sbjct: 353 RDFICEVCGCKFSQSKNLKRHALKHTENGPNRYKCQLCGFSSHRSDKMKEH 403
>AM293893-1|CAL25816.1| 311|Drosophila melanogaster CG18418
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYSGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AM293892-1|CAL25815.1| 311|Drosophila melanogaster CG18418
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYSGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AM293891-1|CAL25814.1| 311|Drosophila melanogaster CG18418
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYSGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AM293890-1|CAL25813.1| 311|Drosophila melanogaster CG18418
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYSGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AM293889-1|CAL25812.1| 311|Drosophila melanogaster CG18418
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYSGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AM293888-1|CAL25811.1| 311|Drosophila melanogaster CG18418
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYSGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AM293887-1|CAL25810.1| 311|Drosophila melanogaster CG18418
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYSGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AM293886-1|CAL25809.1| 311|Drosophila melanogaster CG18418
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYSGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AM293885-1|CAL25808.1| 311|Drosophila melanogaster CG18418
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYSGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AM293883-1|CAL25806.1| 311|Drosophila melanogaster CG18418
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYSGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AM293882-1|CAL25805.1| 311|Drosophila melanogaster CG18418
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYSGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AE014296-894|AAF47932.1| 311|Drosophila melanogaster CG18418-PA
protein.
Length = 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYSGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AE014134-2141|AAF53152.2| 469|Drosophila melanogaster CG6792-PA
protein.
Length = 469
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 381 RDY*RFLTRCDDEIMKINKSHSLTHGEPGPDRHTC-TCLYSLNR*EQVAKY 232
RD+ + C K K H+L H E GP+R+ C C +S +R +++ ++
Sbjct: 353 RDFICEVCGCKFSQSKNLKRHALKHTENGPNRYKCQLCGFSSHRSDKMKEH 403
>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
protein.
Length = 1286
Score = 22.2 bits (45), Expect(3) = 5.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 476 SAKPPPPPQTVD 441
SA PPPPP ++
Sbjct: 759 SAPPPPPPAPIE 770
Score = 21.8 bits (44), Expect(3) = 5.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 467 PPPPPQTVDKSK 432
PPPPP + SK
Sbjct: 777 PPPPPMSASPSK 788
Score = 21.4 bits (43), Expect(3) = 5.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 482 HMSAKPPPPP 453
H A PPPPP
Sbjct: 709 HAVAPPPPPP 718
>BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p
protein.
Length = 1153
Score = 22.2 bits (45), Expect(3) = 5.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 476 SAKPPPPPQTVD 441
SA PPPPP ++
Sbjct: 626 SAPPPPPPAPIE 637
Score = 21.8 bits (44), Expect(3) = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 467 PPPPPQTVDKSK 432
PPPPP + SK
Sbjct: 644 PPPPPMSASPSK 655
Score = 21.4 bits (43), Expect(3) = 5.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 482 HMSAKPPPPP 453
H A PPPPP
Sbjct: 576 HAVAPPPPPP 585
>U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino
protein.
Length = 1058
Score = 22.2 bits (45), Expect(3) = 5.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 476 SAKPPPPPQTVD 441
SA PPPPP ++
Sbjct: 531 SAPPPPPPAPIE 542
Score = 21.8 bits (44), Expect(3) = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 467 PPPPPQTVDKSK 432
PPPPP + SK
Sbjct: 549 PPPPPMSASPSK 560
Score = 21.4 bits (43), Expect(3) = 5.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 482 HMSAKPPPPP 453
H A PPPPP
Sbjct: 481 HAVAPPPPPP 490
>AM293884-1|CAL25807.1| 311|Drosophila melanogaster CG18418
protein.
Length = 311
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 641 PPEIGTLDLASNKSVLRLEGNF--WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHM 477
P GT+D+ K VL+ EG F W +++GP + ++ E YS+HM
Sbjct: 247 PEYNGTIDVL--KKVLKNEGAFAVWKGFTPYLMRMGPHTIFSFVFLEQMNKAYSKHM 301
>AE014296-1467|AAF50407.1| 681|Drosophila melanogaster CG6765-PA
protein.
Length = 681
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 524 DYLRSETYKVLYSRHMSAKPPPPPQTVDKS 435
DY + ++ + S ++A PPPPPQ S
Sbjct: 384 DYYEAPHFEHVVSSRLAATPPPPPQQAPPS 413
>AY071500-1|AAL49122.1| 514|Drosophila melanogaster RE55842p
protein.
Length = 514
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 590 LEGNF-WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAKPPPPP 453
+ NF W+PP D L+ P V D+ R Y + + + PP PP
Sbjct: 135 IHSNFTWMPPKSD-LQAQPK-VQDHARPLLYATISTNNQITPPPSPP 179
>AY058605-1|AAL13834.1| 585|Drosophila melanogaster LD29807p
protein.
Length = 585
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -1
Query: 590 LEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAKPPPPPQTVDKSKKAS 423
++G V +E + + S V+ ++ + SAKPP PP KSK S
Sbjct: 248 VDGKLEVSGVESEKQEPESKVIQEIKEAKKEAAVPLPKSAKPPVPPVKTTKSKVPS 303
>AE014297-2565|AAF55582.1| 726|Drosophila melanogaster CG7706-PA
protein.
Length = 726
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 473 AKPPPPPQTVDKSKKASRAA 414
A+PPPPP + K+ K+S AA
Sbjct: 27 AEPPPPPLKIPKTPKSSPAA 46
>AE014297-1038|AAF54448.2| 514|Drosophila melanogaster CG12946-PA,
isoform A protein.
Length = 514
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 590 LEGNF-WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAKPPPPP 453
+ NF W+PP D L+ P V D+ R Y + + + PP PP
Sbjct: 135 IHSNFTWMPPKSD-LQAQPK-VQDHARPLLYATISTNNQITPPPSPP 179
>AE014297-1037|ABI31156.1| 630|Drosophila melanogaster CG12946-PB,
isoform B protein.
Length = 630
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 590 LEGNF-WVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAKPPPPP 453
+ NF W+PP D L+ P V D+ R Y + + + PP PP
Sbjct: 251 IHSNFTWMPPKSD-LQAQPK-VQDHARPLLYATISTNNQITPPPSPP 295
>AE014134-1406|AAF52606.2| 585|Drosophila melanogaster CG8668-PA
protein.
Length = 585
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -1
Query: 590 LEGNFWVPPIEDQLKLGPSHVLDYLRSETYKVLYSRHMSAKPPPPPQTVDKSKKAS 423
++G V +E + + S V+ ++ + SAKPP PP KSK S
Sbjct: 248 VDGKLEVSGVESEKQEPESKVIQEIKEAKKEAAVPLPKSAKPPVPPVKTTKSKVPS 303
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,755,147
Number of Sequences: 53049
Number of extensions: 537748
Number of successful extensions: 2636
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2592
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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