Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15p01
         (595 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061225-1|AAL28773.1|  333|Drosophila melanogaster LD16758p pro...    29   6.3  
AF217788-1|AAF32311.1| 1059|Drosophila melanogaster O-glycosyltr...    29   6.3  
AF145622-1|AAD38597.1| 1011|Drosophila melanogaster BcDNA.GH0424...    29   6.3  
AE013599-67|AAG22339.1| 1059|Drosophila melanogaster CG10392-PC,...    29   6.3  
AE013599-66|AAF57338.1| 1059|Drosophila melanogaster CG10392-PB,...    29   6.3  
AE013599-65|AAG22338.1| 1059|Drosophila melanogaster CG10392-PA,...    29   6.3  

>AY061225-1|AAL28773.1|  333|Drosophila melanogaster LD16758p
           protein.
          Length = 333

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 36  RRQYTVTARTFLYCNINQFSKRLDMSTIQS 125
           RRQY +     +YCN NQ  K +D  T++S
Sbjct: 126 RRQYMLPDDAVVYCNFNQLYK-IDPQTLES 154


>AF217788-1|AAF32311.1| 1059|Drosophila melanogaster
           O-glycosyltransferase protein.
          Length = 1059

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 36  RRQYTVTARTFLYCNINQFSKRLDMSTIQS 125
           RRQY +     +YCN NQ  K +D  T++S
Sbjct: 852 RRQYMLPDDAVVYCNFNQLYK-IDPQTLES 880


>AF145622-1|AAD38597.1| 1011|Drosophila melanogaster BcDNA.GH04245
           protein.
          Length = 1011

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 36  RRQYTVTARTFLYCNINQFSKRLDMSTIQS 125
           RRQY +     +YCN NQ  K +D  T++S
Sbjct: 852 RRQYMLPDDAVVYCNFNQLYK-IDPQTLES 880


>AE013599-67|AAG22339.1| 1059|Drosophila melanogaster CG10392-PC,
           isoform C protein.
          Length = 1059

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 36  RRQYTVTARTFLYCNINQFSKRLDMSTIQS 125
           RRQY +     +YCN NQ  K +D  T++S
Sbjct: 852 RRQYMLPDDAVVYCNFNQLYK-IDPQTLES 880


>AE013599-66|AAF57338.1| 1059|Drosophila melanogaster CG10392-PB,
           isoform B protein.
          Length = 1059

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 36  RRQYTVTARTFLYCNINQFSKRLDMSTIQS 125
           RRQY +     +YCN NQ  K +D  T++S
Sbjct: 852 RRQYMLPDDAVVYCNFNQLYK-IDPQTLES 880


>AE013599-65|AAG22338.1| 1059|Drosophila melanogaster CG10392-PA,
           isoform A protein.
          Length = 1059

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 36  RRQYTVTARTFLYCNINQFSKRLDMSTIQS 125
           RRQY +     +YCN NQ  K +D  T++S
Sbjct: 852 RRQYMLPDDAVVYCNFNQLYK-IDPQTLES 880


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,925,159
Number of Sequences: 53049
Number of extensions: 456855
Number of successful extensions: 857
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)