Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15o22
(686 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0359 + 22508900-22509439 176 2e-44
02_01_0160 + 1116160-1116678 172 3e-43
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 171 3e-43
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 171 6e-43
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 147 6e-36
10_01_0309 + 3417602-3418147 135 4e-32
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 133 1e-31
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 129 2e-30
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 124 5e-29
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 114 5e-26
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 107 8e-24
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 103 1e-22
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 96 3e-20
06_01_0214 + 1634171-1634173,1634263-1634742 88 7e-18
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 82 5e-16
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 68 6e-12
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 66 3e-11
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 63 2e-10
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 58 9e-09
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 49 4e-06
02_01_0086 + 613113-613532 45 5e-05
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 44 2e-04
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 37 0.017
01_01_0077 - 585670-585787,585921-586687 35 0.070
11_01_0535 + 4234282-4235082 30 1.5
02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657 30 1.5
08_02_0053 + 11721658-11721689,11721960-11722710 30 2.0
07_03_1767 + 29338867-29338912,29339261-29339325,29339571-293396... 29 3.5
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 29 4.6
03_04_0076 - 17068516-17068838,17068897-17069198,17069282-170694... 28 6.0
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11... 28 6.0
>09_06_0359 + 22508900-22509439
Length = 179
Score = 176 bits (428), Expect = 2e-44
Identities = 84/134 (62%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
Frame = -1
Query: 683 LCTGEKGLRLQG--LHFSIVSS----PIXMLQGGDFTNHNGTGGKSIYGNKFEDENFTLK 522
LCTGEKGL G LH+ + P M QGGDFT NGTGG+SIYG++F DENF L+
Sbjct: 41 LCTGEKGLGASGKPLHYKGSAFHRIIPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLR 100
Query: 521 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 342
HTGPGVLSMANAG +TNGSQFFI T +T+WLDG+HVVFG VV+G VV+++E GS SG
Sbjct: 101 HTGPGVLSMANAGPNTNGSQFFICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSGG 160
Query: 341 TSKRIVIKDCGQIA 300
T++R++I+DCGQ+A
Sbjct: 161 TAERVLIEDCGQLA 174
>02_01_0160 + 1116160-1116678
Length = 172
Score = 172 bits (418), Expect = 3e-43
Identities = 85/135 (62%), Positives = 98/135 (72%), Gaps = 6/135 (4%)
Frame = -1
Query: 686 ALCTGEKGLRLQG--LHFSIVSS----PIXMLQGGDFTNHNGTGGKSIYGNKFEDENFTL 525
ALCTGEKG+ G LH+ + P M QGGDFT NGTGG+SIYG KF DE F
Sbjct: 38 ALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKF 97
Query: 524 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 345
KH PG+LSMANAG +TNGSQFFI TV SWLDG+HVVFG VVEGM+VVK IE GS+ G
Sbjct: 98 KHDSPGILSMANAGPNTNGSQFFICTVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGG 157
Query: 344 KTSKRIVIKDCGQIA 300
T+K +VI DCGQ++
Sbjct: 158 STAKPVVIADCGQLS 172
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 171 bits (417), Expect = 3e-43
Identities = 81/129 (62%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Frame = -1
Query: 686 ALCTGEKGLRLQGLHFSIVSSPIXMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPG 507
ALCTGEKG +G F V M+QGGDF NGTGGKSIYG F+DENF L HTGPG
Sbjct: 120 ALCTGEKGFGYKGSSFHRVIKDF-MIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPG 178
Query: 506 VLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG-KTSKR 330
V+SMANAG +TNGSQFFI TVKT WLDGRHVVFG V+EGM++VK IE+ + G + K+
Sbjct: 179 VVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFGQVIEGMDIVKMIESQETDRGDRPKKK 238
Query: 329 IVIKDCGQI 303
+VI +CG++
Sbjct: 239 VVISECGEL 247
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 171 bits (415), Expect = 6e-43
Identities = 84/134 (62%), Positives = 98/134 (73%), Gaps = 6/134 (4%)
Frame = -1
Query: 686 ALCTGEKGLRLQG--LHFSIVSS----PIXMLQGGDFTNHNGTGGKSIYGNKFEDENFTL 525
ALCTGEKG G LHF + P M+QGGDFT +G GG+SIYG KF DENF +
Sbjct: 85 ALCTGEKGTGKSGKALHFKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENFKI 144
Query: 524 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 345
KHTGPG+LSMANAG DTNGSQFFITTV TSWLDG+HVVFG V+ GM+VV +IE G QSG
Sbjct: 145 KHTGPGLLSMANAGRDTNGSQFFITTVTTSWLDGKHVVFGKVLSGMDVVYKIEAEGQQSG 204
Query: 344 KTSKRIVIKDCGQI 303
++VI D G++
Sbjct: 205 SPKSKVVIADSGEL 218
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 147 bits (357), Expect = 6e-36
Identities = 73/134 (54%), Positives = 90/134 (67%), Gaps = 6/134 (4%)
Frame = -1
Query: 686 ALCTGEKGLRLQGLHFSIVSSPIX------MLQGGDFTNHNGTGGKSIYGNKFEDENFTL 525
A+CTGEKGL G S +P M+QGGD + NGTG SIYG F DENF +
Sbjct: 74 AICTGEKGLGKSGKPLSYKGTPFHRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKI 133
Query: 524 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 345
H+ PG+LSMAN DTNGSQFFITTVK + LDG+HVVFG V+ GM+VV +IE GSQSG
Sbjct: 134 NHSAPGLLSMANYAKDTNGSQFFITTVKLTRLDGKHVVFGKVLSGMDVVYKIEAEGSQSG 193
Query: 344 KTSKRIVIKDCGQI 303
+++I D G++
Sbjct: 194 TPRSKVLISDSGEL 207
>10_01_0309 + 3417602-3418147
Length = 181
Score = 135 bits (326), Expect = 4e-32
Identities = 74/135 (54%), Positives = 84/135 (62%), Gaps = 10/135 (7%)
Frame = -1
Query: 683 LCTGEKG-------LRLQGLHFSIVSSPIXMLQGGDFTNHNGTGGKSIY---GNKFEDEN 534
LCTGE+ L +G F V P M QGGD T NGTGG+S F DE
Sbjct: 46 LCTGERAGRSGKSRLHYKGSAFHRVV-PGFMCQGGDITAGNGTGGESALDGAARHFPDEG 104
Query: 533 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 354
F +KH GPGV+SMANAG +TNGSQFFIT K WLDGRHV FG VV GM V+ I+ G+
Sbjct: 105 FAVKHDGPGVVSMANAGPNTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGT 164
Query: 353 QSGKTSKRIVIKDCG 309
SGKT K +VI DCG
Sbjct: 165 WSGKTVKPVVITDCG 179
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 133 bits (322), Expect = 1e-31
Identities = 64/105 (60%), Positives = 78/105 (74%), Gaps = 1/105 (0%)
Frame = -1
Query: 614 MLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTS 435
M+QGGD T +GTGG+SIYG FEDENF LKH G+LSMANAG DTNGSQFFITT +T
Sbjct: 112 MVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITTTRTP 171
Query: 434 WLDGRHVVFGNVVEGMEVVKQIETFG-SQSGKTSKRIVIKDCGQI 303
LDG+HVVFG V++GM VV+ +E +S + IVI DCG++
Sbjct: 172 HLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGEL 216
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 129 bits (312), Expect = 2e-30
Identities = 60/105 (57%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Frame = -1
Query: 614 MLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTS 435
M+QGGD T +GTGG+SIYG KFEDENF LKH G+LSMAN+G +TNGSQFFITT +T
Sbjct: 130 MVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANSGPNTNGSQFFITTTRTP 189
Query: 434 WLDGRHVVFGNVVEGMEVVKQIETFG-SQSGKTSKRIVIKDCGQI 303
LDG+HVVFG V++GM VV+ +E ++ + + + I DCG++
Sbjct: 190 HLDGKHVVFGRVIKGMGVVRSVEHAPVGEADRPTSDVEIVDCGEL 234
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 124 bits (300), Expect = 5e-29
Identities = 59/84 (70%), Positives = 66/84 (78%)
Frame = -1
Query: 686 ALCTGEKGLRLQGLHFSIVSSPIXMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPG 507
ALCTG+KG +G F + M+QGGDF N+NGTGG+SIYG F+DENFTLKHTGPG
Sbjct: 100 ALCTGDKGYGYKGCSFHRIIKDF-MIQGGDFQNNNGTGGRSIYGECFDDENFTLKHTGPG 158
Query: 506 VLSMANAGADTNGSQFFITTVKTS 435
VLSMANAG DTNGSQFFI TVK S
Sbjct: 159 VLSMANAGPDTNGSQFFICTVKFS 182
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 114 bits (275), Expect = 5e-26
Identities = 69/144 (47%), Positives = 91/144 (63%), Gaps = 10/144 (6%)
Frame = -1
Query: 686 ALCTGEKGL---RLQGLHF--SIVSSPIX--MLQGGDFTNHNGTGGKSIYGNKFEDENFT 528
ALCTGE G+ + L++ S+ I M QGGDF+N +G+GG+SIYG FEDENF
Sbjct: 41 ALCTGEMGIGQTSKKPLYYKGSLFHRVIKGFMAQGGDFSNGDGSGGESIYGGTFEDENFV 100
Query: 527 LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQS 348
L+H G+LSMANAG +TNGSQFFIT S LD + VFG ++ G +V+K+IE +
Sbjct: 101 LRHDERGLLSMANAGPNTNGSQFFITFKHNSRLDRKSTVFGKLILGNDVLKRIE-YVDVH 159
Query: 347 GKTSKRIV---IKDCGQIA*FKSL 285
G S +V I DCG++ K L
Sbjct: 160 GAGSTPVVPVRIVDCGELVDGKCL 183
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 107 bits (257), Expect = 8e-24
Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = -1
Query: 614 MLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 438
M+Q GD +GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV T
Sbjct: 545 MIQTGDPLG-DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVAT 603
Query: 437 SWLDGRHVVFGNVVEGMEVVKQIE 366
WLD +H VFG VV+GM+VV+QIE
Sbjct: 604 PWLDNKHTVFGRVVKGMDVVQQIE 627
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 103 bits (248), Expect = 1e-22
Identities = 51/83 (61%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 MLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 438
++QGGD T G GG+SIYG KFEDE LKHTG G+LSMANAG +TNGSQFFIT
Sbjct: 59 IVQGGDPTG-TGRGGESIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAPC 117
Query: 437 SWLDGRHVVFGNVVEGMEVVKQI 369
LDG+H +FG V +GME+VK++
Sbjct: 118 QSLDGKHTIFGRVSKGMEIVKRL 140
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 95.9 bits (228), Expect = 3e-20
Identities = 58/135 (42%), Positives = 77/135 (57%), Gaps = 7/135 (5%)
Frame = -1
Query: 686 ALCTGEKGLRLQGLHFSIVSS------PIXMLQGGDFTNHNGTGGKSIYGNKFEDENFTL 525
ALCTGE+G+ +G S P M+QGGD +G G
Sbjct: 72 ALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVRGDGKGS--------------- 116
Query: 524 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGSQS 348
V++MAN+G D+NGSQF+ITT+KTSWLDG HVVFG V++GM+ V IE G+ +
Sbjct: 117 ------VIAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYN 170
Query: 347 GKTSKRIVIKDCGQI 303
GK K++VI D G+I
Sbjct: 171 GKPRKKVVITDSGEI 185
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 87.8 bits (208), Expect = 7e-18
Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = -1
Query: 614 MLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 438
M+QGGD T G GG SI+G KF DE +LKH GV+SMAN+G +TNGSQFFIT K
Sbjct: 50 MIQGGDPTG-TGKGGTSIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQ 108
Query: 437 SWLDGRHVVFGNVVEGMEVVKQIE 366
L+G + VF V+ G EV+ +E
Sbjct: 109 PHLNGHYTVFAKVIHGFEVLDLME 132
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 81.8 bits (193), Expect = 5e-16
Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = -1
Query: 614 MLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 438
M+QGGD T G+GG+SI+G F+DE N L H+G GV+SMAN+G TNGSQFFI
Sbjct: 394 MIQGGDPTG-TGSGGESIWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSA 452
Query: 437 SWLDGRHVVFGNVVEGMEVVKQIE 366
L+ +H VFG VV G+ + +E
Sbjct: 453 PHLNFKHTVFGMVVGGLTTLSAME 476
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 68.1 bits (159), Expect = 6e-12
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = -1
Query: 614 MLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD-TNGSQFFITTVK 441
++QGGD T +GTGG+SIYG F DE T L+ G+++ ANAG +NGSQFFI+ +
Sbjct: 62 LVQGGDPTG-SGTGGESIYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDR 120
Query: 440 TSWLDGRHVVFGNV 399
WLD ++ +FG V
Sbjct: 121 CDWLDKKNTIFGKV 134
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 65.7 bits (153), Expect = 3e-11
Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Frame = -1
Query: 680 CTGE---KGLR--LQGLHFSIVSSPIXMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT 516
CTGE GL +G F V M+QGGD+ +GTG SIYG KF+DENF KHT
Sbjct: 73 CTGEHRKSGLPQGYKGCQFHRVIKDF-MIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHT 131
Query: 515 GPGVLSMANA 486
GPG+LSM +
Sbjct: 132 GPGLLSMVRS 141
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = -1
Query: 464 QFFITTVKTSWLDGRHVVFGNVV-EGMEVVKQIETFGSQSGKTSK-RIVIKDCGQI 303
QFFIT K WLD +HVVFG V+ +GM V++IE + K VI +CG++
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVATGPNNRPKLACVISECGEM 255
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 63.3 bits (147), Expect = 2e-10
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Frame = -1
Query: 614 MLQGGDFTNHNGTGGKSIY----GNK---FEDE-NFTLKHTGPGVLSMANAGADTNGSQF 459
+ Q GD T G GG S+Y G++ F+DE L+H+ G ++MA+AG + N SQF
Sbjct: 50 LAQTGDPTG-TGAGGDSVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQF 108
Query: 458 FIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI-ETFGSQSGKTSKRIVIK 318
+IT +LD +H VFG V EG + + +I ET+ G+ K I IK
Sbjct: 109 YITLRDDVDYLDDKHTVFGMVAEGFDTLTKISETYVDDKGRPFKDIRIK 157
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 57.6 bits (133), Expect = 9e-09
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = -1
Query: 548 FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK-TSWLDGRHVVFGNVVEGMEVVK 375
F+DE + L+H+ G ++MA+AG + N SQF+IT +LD +H VFG V EG + +
Sbjct: 108 FDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTIT 167
Query: 374 QI-ETFGSQSGKTSKRIVIK 318
+I ET+ G+ K I I+
Sbjct: 168 KINETYVDDKGRPFKDIRIR 187
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = -1
Query: 446 VKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 300
V TS + +HVVFG VV GM ++K++E GS +GK + + I DCG+++
Sbjct: 87 VSTSCVS-KHVVFGKVVTGMPLLKKLEAVGSDTGKPTCEVKIVDCGEVS 134
>02_01_0086 + 613113-613532
Length = 139
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = -1
Query: 542 DENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 366
+ENF L H P + N A+ N SQFF + W DG +VVFG ++ G +K IE
Sbjct: 63 NENFLLPHDRPW---LPNGSAENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKAIE 115
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = -1
Query: 614 MLQGGDFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFITTVKT 438
++QGGDF + NG + I K EN + KH + + N + G FITT
Sbjct: 143 VIQGGDF-DFNGAAQEWILKAKASGENALSPKHEAFMIGTTKNP--NNKGFDLFITTAPI 199
Query: 437 SWLDGRHVVFGNVVEGMEVVKQIE 366
L+ + VVFG V+ G ++V++IE
Sbjct: 200 PDLNDKLVVFGQVINGQDIVQEIE 223
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -1
Query: 530 TLKHTGPGVLSMA-NAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 366
T+KH G+LSM ++ ++ GS F I LDG++ VFG + +G + ++++E
Sbjct: 156 TVKHVR-GILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLE 210
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 34.7 bits (76), Expect = 0.070
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = -1
Query: 485 GADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 369
G NG++F ITT LD +V G VV+GM+V+ +I
Sbjct: 202 GVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLGKI 240
>11_01_0535 + 4234282-4235082
Length = 266
Score = 30.3 bits (65), Expect = 1.5
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +1
Query: 310 PQSLITILLEVFPDWLPKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNW-EPLVSAP 486
P +L L+E WLP + + TT+ ST + T LP++ +L V + PL
Sbjct: 50 PAALAWCLMESPTLWLPPLVLSATTTSLSTPTLRVTILPAALYMLHYVHRTLVHPL---R 106
Query: 487 ALAMERTPGPV-CLRVKFS-SSNLL 555
L + R P P+ L + F S NLL
Sbjct: 107 LLRLRRAPAPMPILIIMFGFSFNLL 131
>02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657
Length = 1136
Score = 30.3 bits (65), Expect = 1.5
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +3
Query: 330 SLRGLPRLAAKGLNLLDNF--HAFNNIPKDNMSAIQPGGLDSG-DEELGTISISTGISHG 500
SLRGL R+ + G+N L N+ +Q L G EE+G ++ G+ G
Sbjct: 172 SLRGL-RVLSLGMNTLTGSIPSEIGNLANLMTLNLQFSNLTGGIPEEIGDLAGLVGLGLG 230
Query: 501 EDARSSVLKGEILVFKLIAVDGLS-PSAVMVGEVPSLQH 614
+ + + + L A+ LS PSA + G +PSLQ+
Sbjct: 231 SNQLAGSIPASL--GNLSALKYLSIPSAKLTGSIPSLQN 267
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Frame = -1
Query: 533 FTLKHTGPGVLSMANAGADTNGS----------QFFITTVKTSW--LDGRHVVFGNVVEG 390
F LKH PG LS+ D + +F +TT LDG+++VFG V+EG
Sbjct: 201 FELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTTGPGPCPELDGQNIVFGTVLEG 260
>07_03_1767 +
29338867-29338912,29339261-29339325,29339571-29339642,
29339913-29339956,29340047-29340158,29340879-29340950,
29341449-29341511,29341957-29342034,29342110-29342202,
29342294-29342413,29342762-29342845,29343094-29343309,
29343401-29343448,29343761-29343871,29344170-29344267,
29345004-29345248,29345764-29345832,29345919-29345983,
29346168-29346337,29346434-29346512,29346614-29346869,
29347416-29347461,29347602-29347710,29347820-29347882,
29350075-29350107,29350924-29351442
Length = 991
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 504 DARSSVLKGEILVFKLIAVDGLSPSAVMVGEV 599
DA +V GEIL+ ++ V G++PS V++ ++
Sbjct: 778 DAFVNVQNGEILLIEVNTVPGMTPSTVLIHQI 809
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 373 CLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAM 498
C T ++P +T PK+ L +S L V M+N + S ALA+
Sbjct: 2901 CFTAALPLSTIPKS--LNNSHFALEVTMRNGKKHASLRALAI 2940
>03_04_0076 -
17068516-17068838,17068897-17069198,17069282-17069435,
17069506-17069965,17070413-17070492,17070813-17070869,
17071757-17071838
Length = 485
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 650 GLHFSIVSSPIXMLQGGDFT-NHNGTGGKSIYGNKFEDENFTLKHTGPG 507
G+ S V P+ + T H+GT K++ K NFTLK GPG
Sbjct: 155 GVLTSWVQDPLNAVASFQITVGHSGTSNKTVKAPK----NFTLKAPGPG 199
>03_01_0014 +
113638-113754,113836-113950,114570-114835,115365-115575,
115915-115979,118723-118930,119457-119566,119663-119913,
120250-120356,120442-120509,120624-120701,121070-121198,
121341-121481,122297-122344,122648-122743,124071-124183,
124441-124591,124745-124818,124913-125072,125356-125454,
125532-125618,125761-125907
Length = 946
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 471 ISISTGISHGEDARSSVLKGEILVF 545
++I T I HG D R+S L GE LVF
Sbjct: 119 LAILTAIFHGVDPRTSFLIGEGLVF 143
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,604,512
Number of Sequences: 37544
Number of extensions: 411299
Number of successful extensions: 1034
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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