Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15o15
         (620 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U16996-1|AAB06261.1|  384|Homo sapiens protein tyrosine phosphat...    31   3.3  
U15932-1|AAA64693.2|  383|Homo sapiens protein phosphatase protein.    31   3.3  
BC071858-1|AAH71858.1|  695|Homo sapiens IQ motif containing E p...    31   3.3  
BC062545-1|AAH62545.1|  384|Homo sapiens dual specificity phosph...    31   3.3  
AL355512-2|CAI15120.1|  384|Homo sapiens dual specificity phosph...    31   3.3  
AB209823-1|BAD93060.1|  451|Homo sapiens dual specificity phosph...    31   3.3  
BC061518-1|AAH61518.1|  452|Homo sapiens IQCE protein protein.         30   5.7  
BC043150-1|AAH43150.1|  630|Homo sapiens IQCE protein protein.         30   5.7  
AL136792-1|CAB66726.1|  644|Homo sapiens hypothetical protein pr...    30   5.7  
AB028946-1|BAA82975.2|  666|Homo sapiens KIAA1023 protein protein.     30   5.7  
BC035561-1|AAH35561.1|  493|Homo sapiens hexosaminidase (glycosy...    30   7.6  

>U16996-1|AAB06261.1|  384|Homo sapiens protein tyrosine phosphatase
           protein.
          Length = 384

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -2

Query: 247 CDSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHT 68
           C++ + R  T C ++ +K K F     FDY+K+ +S++ S +F    + L Y    L  T
Sbjct: 263 CEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMV-SPNFGFMGQLLQYESEILPST 321


>U15932-1|AAA64693.2|  383|Homo sapiens protein phosphatase protein.
          Length = 383

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -2

Query: 247 CDSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHT 68
           C++ + R  T C ++ +K K F     FDY+K+ +S++ S +F    + L Y    L  T
Sbjct: 262 CEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMV-SPNFGFMGQLLQYESEILPST 320


>BC071858-1|AAH71858.1|  695|Homo sapiens IQ motif containing E
           protein.
          Length = 695

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 244 DSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKS 128
           D  +++  T+ K+ NL+       TY++ V RLQ+LL S
Sbjct: 230 DGTIRKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLAS 268


>BC062545-1|AAH62545.1|  384|Homo sapiens dual specificity
           phosphatase 5 protein.
          Length = 384

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -2

Query: 247 CDSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHT 68
           C++ + R  T C ++ +K K F     FDY+K+ +S++ S +F    + L Y    L  T
Sbjct: 263 CEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMV-SPNFGFMGQLLQYESEILPST 321


>AL355512-2|CAI15120.1|  384|Homo sapiens dual specificity
           phosphatase 5 protein.
          Length = 384

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -2

Query: 247 CDSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHT 68
           C++ + R  T C ++ +K K F     FDY+K+ +S++ S +F    + L Y    L  T
Sbjct: 263 CEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMV-SPNFGFMGQLLQYESEILPST 321


>AB209823-1|BAD93060.1|  451|Homo sapiens dual specificity
           phosphatase 5 variant protein.
          Length = 451

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -2

Query: 247 CDSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHT 68
           C++ + R  T C ++ +K K F     FDY+K+ +S++ S +F    + L Y    L  T
Sbjct: 330 CEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMV-SPNFGFMGQLLQYESEILPST 388


>BC061518-1|AAH61518.1|  452|Homo sapiens IQCE protein protein.
          Length = 452

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 244 DSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKS 128
           D  + +  T+ K+ NL+       TY++ V RLQ+LL S
Sbjct: 214 DGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLAS 252


>BC043150-1|AAH43150.1|  630|Homo sapiens IQCE protein protein.
          Length = 630

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 244 DSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKS 128
           D  + +  T+ K+ NL+       TY++ V RLQ+LL S
Sbjct: 165 DGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLAS 203


>AL136792-1|CAB66726.1|  644|Homo sapiens hypothetical protein
           protein.
          Length = 644

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 244 DSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKS 128
           D  + +  T+ K+ NL+       TY++ V RLQ+LL S
Sbjct: 179 DGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLAS 217


>AB028946-1|BAA82975.2|  666|Homo sapiens KIAA1023 protein protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 244 DSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKS 128
           D  + +  T+ K+ NL+       TY++ V RLQ+LL S
Sbjct: 201 DGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLAS 239


>BC035561-1|AAH35561.1|  493|Homo sapiens hexosaminidase (glycosyl
           hydrolase family 20, catalytic domain) containing
           protein.
          Length = 493

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -3

Query: 537 SNSNKIWWRFLCRATKRSATKNCLRKTTRTWRLPWKTQTASATNAPTSDGFRSKCTAA 364
           S+S + W  F   + +RSA+ +    + R+WRLP    +  +T  P   G+R  CT A
Sbjct: 340 SSSTRSW--FSTSSPQRSASWHSGAPSCRSWRLPC---SWLSTRMPWRSGWRKTCTPA 392


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,476,307
Number of Sequences: 237096
Number of extensions: 1625865
Number of successful extensions: 3700
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3700
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)