Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15o14
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075384-1|AAL68222.1|  787|Drosophila melanogaster LD23641p pro...   147   1e-35
AE014297-4205|AAF56765.1|  787|Drosophila melanogaster CG5520-PA...   147   1e-35
X03810-2|CAA27435.1|  717|Drosophila melanogaster hsp 82 protein.      58   8e-09
AY122080-1|AAM52592.1|  717|Drosophila melanogaster AT20544p pro...    58   8e-09
AE014296-590|AAF47734.1|  717|Drosophila melanogaster CG1242-PA ...    58   8e-09

>AY075384-1|AAL68222.1|  787|Drosophila melanogaster LD23641p protein.
          Length = 787

 Score =  147 bits (357), Expect = 1e-35
 Identities = 75/152 (49%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
 Frame = -3

Query: 673  EXDRAKEKLEAYKKQYEPLTRWLGD-KLGXWITRATVXXXXXXXXXXXXXXAFGWTGNME 497
            E +++K+  E+ K  +EPL +WL D  L   I++A V               FGWTGNME
Sbjct: 597  ESEKSKKNFESLKSTFEPLVKWLNDVALKDQISKAQVSERLSNSPCALVAGVFGWTGNME 656

Query: 496  RLALSNAHQKADDPQRRHHLTQKKMLEINPRHPIVAELLRRVQXXXXXXXXXXXAHTLYR 317
            RLA+SNAHQK+DDPQR ++L QKK LEINPRHP++ ELLRRV+           A  ++R
Sbjct: 657  RLAMSNAHQKSDDPQRTYYLNQKKTLEINPRHPLMRELLRRVEADEADDTAKDMAVMMFR 716

Query: 316  TAALRSGYVLQEGQAVLFADSVETMLQRTLGL 221
            TA LRSGY+LQE     FADS+E M+++TLG+
Sbjct: 717  TATLRSGYMLQETSQ--FADSIEQMMRQTLGV 746


>AE014297-4205|AAF56765.1|  787|Drosophila melanogaster CG5520-PA
            protein.
          Length = 787

 Score =  147 bits (357), Expect = 1e-35
 Identities = 75/152 (49%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
 Frame = -3

Query: 673  EXDRAKEKLEAYKKQYEPLTRWLGD-KLGXWITRATVXXXXXXXXXXXXXXAFGWTGNME 497
            E +++K+  E+ K  +EPL +WL D  L   I++A V               FGWTGNME
Sbjct: 597  ESEKSKKNFESLKSTFEPLVKWLNDVALKDQISKAQVSERLSNSPCALVAGVFGWTGNME 656

Query: 496  RLALSNAHQKADDPQRRHHLTQKKMLEINPRHPIVAELLRRVQXXXXXXXXXXXAHTLYR 317
            RLA+SNAHQK+DDPQR ++L QKK LEINPRHP++ ELLRRV+           A  ++R
Sbjct: 657  RLAMSNAHQKSDDPQRTYYLNQKKTLEINPRHPLMRELLRRVEADEADDTAKDMAVMMFR 716

Query: 316  TAALRSGYVLQEGQAVLFADSVETMLQRTLGL 221
            TA LRSGY+LQE     FADS+E M+++TLG+
Sbjct: 717  TATLRSGYMLQETSQ--FADSIEQMMRQTLGV 746


>X03810-2|CAA27435.1|  717|Drosophila melanogaster hsp 82 protein.
          Length = 717

 Score = 58.4 bits (135), Expect = 8e-09
 Identities = 41/151 (27%), Positives = 65/151 (43%)
 Frame = -3

Query: 673 EXDRAKEKLEAYKKQYEPLTRWLGDKLGXWITRATVXXXXXXXXXXXXXXAFGWTGNMER 494
           E +  K+K E  K ++E L + +   L   + +  V               FGW+ NMER
Sbjct: 538 EDESEKKKREEDKAKFESLCKLMKSILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMER 597

Query: 493 LALSNAHQKADDPQRRHHLTQKKMLEINPRHPIVAELLRRVQXXXXXXXXXXXAHTLYRT 314
           +  + A +   D     ++  KK LEINP HPIV  L ++                L+ T
Sbjct: 598 IMKAQALR---DTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFET 654

Query: 313 AALRSGYVLQEGQAVLFADSVETMLQRTLGL 221
           + L SG+ L   Q  + A  +  M++  LG+
Sbjct: 655 SLLSSGFSLDSPQ--VHASRIYRMIKLGLGI 683


>AY122080-1|AAM52592.1|  717|Drosophila melanogaster AT20544p
           protein.
          Length = 717

 Score = 58.4 bits (135), Expect = 8e-09
 Identities = 41/151 (27%), Positives = 65/151 (43%)
 Frame = -3

Query: 673 EXDRAKEKLEAYKKQYEPLTRWLGDKLGXWITRATVXXXXXXXXXXXXXXAFGWTGNMER 494
           E +  K+K E  K ++E L + +   L   + +  V               FGW+ NMER
Sbjct: 538 EDESEKKKREEDKAKFESLCKLMKSILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMER 597

Query: 493 LALSNAHQKADDPQRRHHLTQKKMLEINPRHPIVAELLRRVQXXXXXXXXXXXAHTLYRT 314
           +  + A +   D     ++  KK LEINP HPIV  L ++                L+ T
Sbjct: 598 IMKAQALR---DTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFET 654

Query: 313 AALRSGYVLQEGQAVLFADSVETMLQRTLGL 221
           + L SG+ L   Q  + A  +  M++  LG+
Sbjct: 655 SLLSSGFSLDSPQ--VHASRIYRMIKLGLGI 683


>AE014296-590|AAF47734.1|  717|Drosophila melanogaster CG1242-PA
           protein.
          Length = 717

 Score = 58.4 bits (135), Expect = 8e-09
 Identities = 41/151 (27%), Positives = 65/151 (43%)
 Frame = -3

Query: 673 EXDRAKEKLEAYKKQYEPLTRWLGDKLGXWITRATVXXXXXXXXXXXXXXAFGWTGNMER 494
           E +  K+K E  K ++E L + +   L   + +  V               FGW+ NMER
Sbjct: 538 EDESEKKKREEDKAKFESLCKLMKSILDNKVEKVVVSNRLVDSPCCIVTSQFGWSANMER 597

Query: 493 LALSNAHQKADDPQRRHHLTQKKMLEINPRHPIVAELLRRVQXXXXXXXXXXXAHTLYRT 314
           +  + A +   D     ++  KK LEINP HPIV  L ++                L+ T
Sbjct: 598 IMKAQALR---DTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFET 654

Query: 313 AALRSGYVLQEGQAVLFADSVETMLQRTLGL 221
           + L SG+ L   Q  + A  +  M++  LG+
Sbjct: 655 SLLSSGFSLDSPQ--VHASRIYRMIKLGLGI 683


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,762,694
Number of Sequences: 53049
Number of extensions: 113610
Number of successful extensions: 455
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)