Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15o06
(318 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666... 136 5e-33
11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047 32 0.085
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 31 0.20
02_05_0417 - 28796121-28796743,28796829-28796925,28797010-287970... 31 0.26
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 29 0.60
01_01_1180 - 9401669-9402412,9402672-9402698 29 0.79
01_01_0140 + 1265785-1265902,1266424-1266845 29 1.0
08_02_0478 + 17621678-17623768 28 1.4
04_04_1079 - 30663919-30665044,30665143-30665298,30665405-306655... 28 1.4
03_05_0400 - 23815408-23815589,23815706-23816020,23816203-238162... 28 1.4
02_05_1127 + 34292894-34293284,34293948-34295443 28 1.4
05_07_0009 - 27015346-27015705,27016552-27016676,27016778-270168... 28 1.8
02_05_1123 + 34275272-34275331,34275451-34275523,34275631-342757... 28 1.8
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 28 1.8
11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090 27 2.4
06_01_1013 - 7931756-7935109 27 2.4
05_03_0039 - 7621613-7622695 27 3.2
04_03_0350 + 14755619-14755692,14755697-14755883,14755964-147560... 27 3.2
02_05_1337 - 35780076-35780290,35780377-35780408,35780490-357805... 27 3.2
10_05_0075 + 8869087-8869413,8869823-8870053,8871145-8871267,887... 27 4.2
08_01_0995 - 10079140-10079314,10080069-10080086,10081362-10081600 27 4.2
07_01_0847 + 6884862-6884902,6884943-6885546 27 4.2
06_03_0097 - 16607936-16608712,16610114-16610320,16611220-166113... 27 4.2
05_05_0158 + 22820764-22822032 27 4.2
05_03_0033 - 7585267-7586028 27 4.2
01_06_1475 + 37634831-37636297 27 4.2
10_02_0141 + 5761931-5762020,5762170-5762201,5762453-5762604,576... 26 5.6
08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579 26 5.6
06_01_0525 - 3800578-3801018,3801395-3801504,3801608-3801683,380... 26 5.6
01_01_0325 + 2631637-2631882,2632715-2632788,2632874-2633006,263... 26 5.6
06_01_0735 + 5431900-5432044,5432137-5432271,5432710-5432750,543... 26 7.4
05_03_0627 - 16342211-16342264,16342332-16342412,16342751-163428... 26 7.4
03_05_1040 + 29883071-29883212,29883372-29883439,29883504-29883806 26 7.4
03_02_0183 - 6225827-6226414,6226478-6226512,6227244-6227331,622... 26 7.4
03_01_0607 + 4464669-4465367,4466212-4467369,4468005-4469114,446... 26 7.4
12_02_0414 + 18824347-18825161,18826018-18828229 25 9.7
09_06_0061 + 20596360-20596618,20597039-20597158,20597329-205974... 25 9.7
08_02_0921 - 22640125-22640268,22640349-22640423,22640496-226407... 25 9.7
08_01_0658 - 5682425-5682832,5682878-5683000 25 9.7
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 25 9.7
07_03_0543 + 19272389-19272534,19273337-19273496,19273584-192737... 25 9.7
06_03_1515 - 30707600-30707613,30708093-30708167,30708596-307086... 25 9.7
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 25 9.7
05_05_0175 + 22966151-22967614 25 9.7
03_05_0411 - 23972738-23973606,23977701-23977794,23978487-239785... 25 9.7
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 25 9.7
02_04_0135 + 20122162-20122433,20123652-20123856 25 9.7
02_03_0347 - 17999780-18000592,18000656-18003019 25 9.7
02_02_0338 + 9105725-9106581,9106950-9107091 25 9.7
>07_03_1220 -
24966169-24966327,24966421-24966552,24966639-24966693,
24967496-24967667,24967771-24967918,24968015-24968050
Length = 233
Score = 136 bits (328), Expect = 5e-33
Identities = 66/100 (66%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Frame = -3
Query: 316 ESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 137
ESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N Y+++A RHVLLRQGVLGIKVK
Sbjct: 130 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVK 189
Query: 136 IMLPWDRQGKNGPKKPQPDHILVTEPKDEPVPLEP-TSEV 20
IML WD +GK GP P PD + + PKDE +P T+E+
Sbjct: 190 IMLDWDPKGKQGPMTPLPDLVTIHAPKDEDEFSKPLTAEI 229
>11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047
Length = 604
Score = 32.3 bits (70), Expect = 0.085
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -2
Query: 173 ASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQRS 21
A +T S R G++ + P R+E + T RP PG+ + R+ A A+ S
Sbjct: 455 AERTMSLRGGGESAGSDSPCRREEAKSRTPRPQPGSAGE-RSAAASAEMSS 504
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 31.1 bits (67), Expect = 0.20
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -2
Query: 110 QERPEEATTRPHPGNRAQGRARAPR 36
Q R + +T RP PG R++GR+R PR
Sbjct: 194 QLRSDYSTHRPPPGGRSRGRSRHPR 218
>02_05_0417 - 28796121-28796743,28796829-28796925,28797010-28797093,
28797173-28797234,28797316-28797460,28797542-28797961,
28798041-28798090,28798163-28798349,28798426-28798680,
28798785-28798953,28799044-28799177,28799291-28799446,
28799534-28799719,28799798-28799962,28800074-28800190,
28800553-28800762,28800850-28801049,28801135-28801405,
28801481-28801547,28801644-28801942,28802425-28802991
Length = 1487
Score = 30.7 bits (66), Expect = 0.26
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -2
Query: 173 ASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQRSALPRAR 3
A + R+TRN G A + RP + T + G A AP A + A PR +
Sbjct: 1161 AEERRATRNAGGGAAPNKAAPKRRPRKTATNTQAAESSDGNAAAP-AVPKPAAPRKK 1216
>02_01_0137 +
988442-988641,989088-989281,989369-989488,989594-989673,
990244-990510,990840-992458,992571-993327,993560-995506
Length = 1727
Score = 29.5 bits (63), Expect = 0.60
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = -3
Query: 205 NDYVNTATRHVLLR----QGVLGIKVKIMLPWDRQGKNGPKKPQPDHILVTEPK 56
++ +N H+ +R QGVL +++ + +Q +NGP+K + L+TE K
Sbjct: 359 SERINGIVNHLRIRGNPVQGVLQLEILRQIALPKQSQNGPRKSRLTISLMTEHK 412
>01_01_1180 - 9401669-9402412,9402672-9402698
Length = 256
Score = 29.1 bits (62), Expect = 0.79
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -2
Query: 143 GQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQRSAL 15
G++ A E +R P NRA A A AD RSAL
Sbjct: 68 GEDAAAAAAGEDAAGGEEDSRASPANRASSAAPAAAADPRSAL 110
>01_01_0140 + 1265785-1265902,1266424-1266845
Length = 179
Score = 28.7 bits (61), Expect = 1.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = -2
Query: 173 ASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQRSALPRA 6
AS+ S + A G R + +R P NRA+ A A AD RSAL A
Sbjct: 103 ASRASSANRASRARAAAGEDTVGRED---SRASPANRARAAAPAAAADPRSALTAA 155
>08_02_0478 + 17621678-17623768
Length = 696
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 247 KFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 152
K + GL+IHSG ND+V+++ + + G++
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGII 452
>04_04_1079 - 30663919-30665044,30665143-30665298,30665405-30665563,
30665640-30665770,30666230-30666315,30666607-30666673,
30666944-30667023,30667173-30667260,30667380-30667428,
30667516-30667608,30667725-30667808,30667986-30668044,
30668293-30668327,30668416-30668718,30669111-30669275,
30669701-30669780,30670932-30671003,30671143-30671234,
30671359-30671433,30671552-30671688,30671763-30671890,
30671942-30672033,30672473-30672808
Length = 1230
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -2
Query: 182 QTCASQTRSTRNQGQNHVAVGPARQERPEEATTR-PHPGNRAQGRARAPRADQRSAL 15
Q C + +HV P ++ RP + +R P R R RA R +Q + +
Sbjct: 861 QPCNDKLEENEKADTSHVKHAPRKRGRPSSSASRTAKPAPRPVRRTRARRGNQHAKI 917
>03_05_0400 -
23815408-23815589,23815706-23816020,23816203-23816277,
23816377-23816530
Length = 241
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 1 ARARGSALRWSARGARARPWALLPGCGLVVASSG 102
A + GS+ R + GARA A P CG +V +G
Sbjct: 13 AASTGSSARMAGAGARAEEAACEPPCGGLVVGAG 46
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -2
Query: 179 TCASQTRSTRNQGQNHVAVG--PARQERPEEATTRPHPGNRAQGRARAPRADQR 24
TC++ T + ++ +A P R P T R HP + A A R ++R
Sbjct: 26 TCSAATSRSASRSSRPLAPSRAPGRPRHPPRPTRRAHPASPRASWAEAARLERR 79
>05_07_0009 -
27015346-27015705,27016552-27016676,27016778-27016853,
27016923-27017105,27018000-27018077,27018159-27018239,
27018347-27018412,27018491-27018556,27019126-27019176,
27019286-27019378,27019498-27019625,27019713-27019851,
27021039-27021136,27021332-27021401,27021565-27021654
Length = 567
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -3
Query: 202 DYVNTATRHVLLRQGVLGIKVKIMLPWDRQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 23
+YV A R V +R+ L + +++L + + + P P P +EPVP+ P +E
Sbjct: 305 EYVREAPRMVPVREP-LELPERLLLTYKPEEQEEDSVPDPVEE-EKPPVEEPVPVPPVTE 362
Query: 22 VRSLAP 5
S P
Sbjct: 363 AVSPPP 368
>02_05_1123 +
34275272-34275331,34275451-34275523,34275631-34275728,
34276012-34276153,34276261-34276361,34276633-34276716,
34276949-34277014,34277102-34277167,34277324-34277404,
34277489-34277566,34277687-34277848,34277936-34278011,
34278111-34278223,34278323-34278751
Length = 542
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -3
Query: 163 QGVLGIKVKIMLPWDRQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 20
Q VL I+ K + + P P P +EP+ EP P++ S V
Sbjct: 283 QAVLAIEYKRKPEDEESSSSAPLPPPPVSTSESEPEPEPEPVKEVSPV 330
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 100 PKKPQPDHILVTEPKDEPVPLEPTS 26
P+ +PD +LV P P PL P +
Sbjct: 129 PRADEPDVVLVLPPSQRPPPLSPAA 153
>11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090
Length = 1037
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 214 LQSGS*VHLQTSLIWHVDHAACQIQQLHNHGH 309
+QSG+ LIWH+ + C+I+ H H
Sbjct: 753 IQSGAPRCSHVILIWHIATSLCEIKLAQEHDH 784
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 119 PARQERPEEATTRPHPGNR-AQGRARAPRADQRSALP 12
PA ++RP++ RP N G+ R P ++ SA P
Sbjct: 60 PASEDRPQQQQRRPRRRNHGGGGQRRGPPQERPSAAP 96
Score = 26.2 bits (55), Expect = 5.6
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -2
Query: 167 QTRSTRNQGQNHVAVGPAR---QERPEEATTRPHPGNRAQGRARAPRADQRSALP 12
Q + R + +NH G R QERP A P P + + + AP A R+A P
Sbjct: 67 QQQQRRPRRRNHGGGGQRRGPPQERPSAAPPPPPPQQQQRQQHAAP-APTRAAAP 120
>05_03_0039 - 7621613-7622695
Length = 360
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 127 PWDRQGKNGPK-KPQPDHILVTEPKDEPVPLEP 32
P + + K PK KP P H EPK EP P EP
Sbjct: 53 PPELEPKPKPKPKPHPKHESKPEPKPEPKP-EP 84
>04_03_0350 +
14755619-14755692,14755697-14755883,14755964-14756072,
14756157-14756379,14756716-14756794,14757222-14757273,
14757354-14757416,14757519-14757616,14757970-14758031,
14758066-14758159,14758430-14758509,14758617-14758686,
14758807-14758864,14758973-14759037,14759127-14759221,
14759318-14759402
Length = 497
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 87 CGFFGPFLPCRSHGNMILTLIPSTPCLRSTCLVAVLT*SLQGSPEW 224
C F P P H ++ L+PS C T +A L G P++
Sbjct: 314 CYRFSPEFPVIIHNELMFLLLPSCSCFDYTNGLADLVVGYMGVPKY 359
>02_05_1337 -
35780076-35780290,35780377-35780408,35780490-35780584,
35780670-35780743,35780851-35780986,35781072-35781135,
35781333-35781395,35781514-35781656,35781752-35781889,
35781973-35782094,35782210-35782375,35782647-35782652,
35782988-35783059,35783241-35783348,35783719-35783848,
35783964-35784070,35784896-35785005,35785302-35785435,
35785528-35785982,35786068-35786595
Length = 965
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 116 ARQERPEEATTRPHPGNRAQGRARAPRADQRSALPR 9
+R+ T P PG R +GR RA R Q P+
Sbjct: 3 SRRPTHRHHTEAPDPGGRGRGRGRAARYAQPQPQPQ 38
>10_05_0075 +
8869087-8869413,8869823-8870053,8871145-8871267,
8871873-8872091
Length = 299
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +1
Query: 13 GSALRWSARGARARPWALLPGCGLVVASSGRSCLAG 120
G A RWS+ RARP L ASSGR C G
Sbjct: 15 GRAARWSSASPRARP-PRRHRRHLHQASSGRRCCYG 49
>08_01_0995 - 10079140-10079314,10080069-10080086,10081362-10081600
Length = 143
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 107 ERPEEATTRPHPGNRAQGRARAPRAD 30
+ ++ T P P +R G AR PRAD
Sbjct: 48 DNDDDKATLPPPQHRGGGAARPPRAD 73
>07_01_0847 + 6884862-6884902,6884943-6885546
Length = 214
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 4 RARGSALRWSARGARAR 54
R RGSA RW A G R+R
Sbjct: 13 RRRGSAARWFATGGRSR 29
>06_03_0097 - 16607936-16608712,16610114-16610320,16611220-16611336,
16611409-16611690,16611811-16612294,16612791-16612929,
16613138-16613243,16613396-16613562,16613632-16613707,
16614173-16614321,16614813-16614874,16615232-16615335,
16616856-16616950,16617046-16617136,16617785-16617922
Length = 997
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 183 PDMCFSDKEY*ESRSKSCCRGTGKARTARRSHN 85
PD SD EY E S R + K R+ RRS +
Sbjct: 962 PDTDSSDHEYEERHKSSSRRSSDKDRSRRRSRH 994
>05_05_0158 + 22820764-22822032
Length = 422
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 169 LRQGVLGIKVKIMLPWDRQGKNGPKKPQPDHILVTEPKDEP-VPLEPTSEVRSLAP 5
LR+ +LG+ ++ R GP +PQ + P +P VPLE + R P
Sbjct: 3 LRRRLLGLSGEVSGRLRRSLSTGPSRPQWAMVNTVTPLPKPNVPLETRATFRLAEP 58
>05_03_0033 - 7585267-7586028
Length = 253
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 115 QGKNGPK-KPQPDHILVTEPKDEPVPLEPTSE 23
+ K+ PK +P+P L EPK EP EP SE
Sbjct: 128 EAKSEPKSEPKPKSELYAEPKSEP-KSEPQSE 158
>01_06_1475 + 37634831-37636297
Length = 488
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 75 MWSGCGFFGPFLPCRSHGNMILTLIPSTPCLRSTC 179
+W+ CG PF P RS T + PC C
Sbjct: 124 VWTACGATAPFNPVRS------TTVADVPCTDDAC 152
>10_02_0141 +
5761931-5762020,5762170-5762201,5762453-5762604,
5763688-5763770,5764689-5764766,5764884-5764979,
5765076-5765345
Length = 266
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 137 NHVAVGPARQERPEEATTRPHPGNRAQGR 51
NH + G ++Q+RP +A + P +GR
Sbjct: 210 NHDSSGLSQQQRPADAERKRRPSQMGRGR 238
>08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579
Length = 824
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
Frame = +1
Query: 202 HCKGLQSGS*VHL-QTSLIWHVDHA-----ACQIQQLHNH 303
H GS + + +TSL+WH + A +CQ ++L +H
Sbjct: 657 HYSDATDGSYIEVKETSLVWHYEEADPDFGSCQAKELQDH 696
>06_01_0525 -
3800578-3801018,3801395-3801504,3801608-3801683,
3801757-3801909,3802088-3802159,3802242-3802322,
3802936-3803001,3803117-3803182,3803277-3803327,
3803429-3803512,3803988-3804088,3804188-3804329,
3804820-3804917,3805194-3805263,3805409-3805477
Length = 559
Score = 26.2 bits (55), Expect = 5.6
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -3
Query: 202 DYVNTATRHVLLRQGVLGIKVKIMLPWDRQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 23
+YV A V + VL I+ K + + + P P+P+ EP+ EPV E E
Sbjct: 287 EYVTEAPT-VAQKDKVLAIEYKKEAEEEEKPASPPPAPEPEPEQEPEPEPEPVKEEAPKE 345
>01_01_0325 +
2631637-2631882,2632715-2632788,2632874-2633006,
2633091-2633172,2633471-2633580,2633659-2633751,
2633854-2633904,2634013-2634105,2635257-2636129,
2636204-2636316,2636436-2636448
Length = 626
Score = 26.2 bits (55), Expect = 5.6
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -3
Query: 313 SGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP-CNDYVNTATRHVLLRQGVLGIKVK 137
SG G + G+ R RA K + + P ++ V T +++ R G L +
Sbjct: 57 SGGGGGRRLRHGRGRRARAFRRKLEEENKNSNNRPRASNVVIAYTPNLIRRYGTLLRNIS 116
Query: 136 IMLPWDRQGK 107
+LP+D QGK
Sbjct: 117 FLLPYDGQGK 126
>06_01_0735 +
5431900-5432044,5432137-5432271,5432710-5432750,
5433463-5433579,5433779-5433898,5433982-5434076,
5434149-5434242,5434592-5434723,5435191-5435303,
5435443-5435566,5435884-5436000,5436083-5436177,
5436269-5436362,5436655-5436780,5436854-5436966,
5437067-5437256,5437395-5437508,5437551-5437598
Length = 670
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 27 LVGSRGTGSSLGSVTRMWSGCGFFGPFLPCRSHGN 131
++GS G ++ + R+ +GC + FL GN
Sbjct: 421 IIGSHLGGGTILGLARLLTGCSSYDEFLELSQRGN 455
>05_03_0627 -
16342211-16342264,16342332-16342412,16342751-16342849,
16343660-16343770,16343964-16344116,16344741-16344881,
16345456-16345513,16345852-16345967,16346292-16346405,
16346496-16346557,16348788-16348930,16349030-16349097,
16349200-16349379,16349835-16350013,16350447-16350636,
16350920-16350978,16351421-16351574,16352133-16352158,
16352567-16353014
Length = 811
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = -3
Query: 127 PWDRQGKNGPKKPQPD---HILVTEPKDE 50
PW+++ N P P+PD V EPK E
Sbjct: 324 PWEKEVINDPCTPKPDPNPFTYVPEPKSE 352
>03_05_1040 +
29883071-29883212,29883372-29883439,29883504-29883806
Length = 170
Score = 25.8 bits (54), Expect = 7.4
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 55 PWALLPGCGLVV 90
PW LLP CGL++
Sbjct: 4 PWVLLPACGLLL 15
>03_02_0183 -
6225827-6226414,6226478-6226512,6227244-6227331,
6228892-6228900
Length = 239
Score = 25.8 bits (54), Expect = 7.4
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 266 STCQINEVCRWTHDPLWRPLQ 204
ST + CRW H P + P Q
Sbjct: 122 STSHVGASCRWPHPPPYMPRQ 142
>03_01_0607 +
4464669-4465367,4466212-4467369,4468005-4469114,
4469273-4469314,4469496-4469572,4469671-4469755,
4469818-4469901,4469988-4470089,4470181-4470279,
4470794-4470919
Length = 1193
Score = 25.8 bits (54), Expect = 7.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = -2
Query: 314 IWCPWL*SCCIWQAAWSTCQINEVCRWT 231
+WC WL C + + ++ CR T
Sbjct: 806 VWCKWLEECASGRVPCNDLKLKSYCRLT 833
>12_02_0414 + 18824347-18825161,18826018-18828229
Length = 1008
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 157 VLGIKVKIMLPWDRQGKNGPKKPQPDHILVTEPKDE 50
++G K K+ P G P+P HIL+ + DE
Sbjct: 78 LMGPKTKVSFPKRALRTVGLMDPRPQHILLIQELDE 113
>09_06_0061 +
20596360-20596618,20597039-20597158,20597329-20597462,
20597578-20597730,20597816-20597927,20598022-20598352,
20598524-20598737,20598842-20598931,20599669-20599924,
20600029-20600141,20600733-20600831,20600915-20600980,
20601018-20601167,20601278-20601368,20601710-20601749,
20603888-20605247,20605478-20605507,20605834-20605885,
20606264-20606397,20606513-20606665,20607089-20607202
Length = 1356
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 96 FGPFLPCRSHGNMILTLIPSTP 161
FGP LP R+H ++PS P
Sbjct: 798 FGPRLPVRAHAITASPMLPSPP 819
>08_02_0921 -
22640125-22640268,22640349-22640423,22640496-22640757,
22642286-22642578,22642609-22642812,22643216-22643901,
22643958-22644033
Length = 579
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 126 GNMILTLIPSTPCLRSTCLVAVLT*SLQGSPEWIM 230
GNM+ LI ++P L LV+V EW++
Sbjct: 163 GNMLAALISASPLLEEVELVSVFLVGDYPDEEWVI 197
>08_01_0658 - 5682425-5682832,5682878-5683000
Length = 176
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -2
Query: 158 STRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQRS 21
+T +G+ H AVGP+R R E ++ A + R+ ++
Sbjct: 35 ATEARGRPHAAVGPSRSSREFEVEEDDDATTASRSSASSTRSGSKA 80
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 119 PARQERPEEATTRPHPGNRAQGRARAPRAD 30
P Q P EA P P Q ++ PRA+
Sbjct: 127 PPTQPPPREAQLAPPPPREQQSKSALPRAE 156
>07_03_0543 +
19272389-19272534,19273337-19273496,19273584-19273741,
19273852-19273945,19274082-19274198,19275119-19275229,
19275309-19275396,19275615-19275718,19275796-19275867,
19275950-19276039,19276151-19276308,19276746-19276752,
19277140-19277194,19277273-19277421,19277543-19277664,
19277916-19278105
Length = 606
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 100 PKKPQPDHILVTEPKDEPVPLEPTSE 23
PKKP+P I K EP+ L+P SE
Sbjct: 223 PKKPKPSKI----QKKEPILLDPWSE 244
>06_03_1515 -
30707600-30707613,30708093-30708167,30708596-30708647,
30708751-30708831,30709145-30709219,30709870-30709977,
30710026-30710032,30710133-30710268,30710361-30710685
Length = 290
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 182 QTCASQTRSTRNQGQNHVAVGPARQERP 99
+TCA + R T++QG +G Q+RP
Sbjct: 180 KTCAIRRRLTKHQGMLLFLIGDDPQKRP 207
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 73 GCGLVVASSGRSCLAGPTA 129
GC +A SG S LAGPTA
Sbjct: 284 GCS-AIADSGTSLLAGPTA 301
>05_05_0175 + 22966151-22967614
Length = 487
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 112 GKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSL 11
G+ PK+P P H + T + E P P + R +
Sbjct: 273 GREQPKQPPPRHHVSTLQRKESEPPPPPRQSRDI 306
>03_05_0411 -
23972738-23973606,23977701-23977794,23978487-23978549,
23979558-23979630,23980325-23980375,23980491-23980906,
23981066-23981396,23983165-23983223,23983799-23983975
Length = 710
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 227 DPLWRPLQ*LRQHCYQTCASQTRSTRNQGQN 135
D LWRPL +C A++T+S+R+ Q+
Sbjct: 217 DELWRPL-----NCLVEAANRTKSSRSSSQS 242
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -2
Query: 134 HVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQRSALPR 9
H A+ PA P +P P +G +PR A PR
Sbjct: 9 HPALQPAPAPAPPPPNLKPKPAPTTRGPCPSPRTLVARAAPR 50
>02_04_0135 + 20122162-20122433,20123652-20123856
Length = 158
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 6 GARERTSLVGSRG--TGSSLGSVTRMWSGCGFFGPFLPCRSHGNMILTLIPSTP 161
G E + G+RG + GSV CG+ P R +++++L+ S P
Sbjct: 90 GGLETPGIEGARGHHCHAHAGSVLWQSKDCGYPRPSTSSRQKYDLVMSLLESMP 143
>02_03_0347 - 17999780-18000592,18000656-18003019
Length = 1058
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 128 AVGPARQERPEE-ATTRPHPGNRAQGRARAPRADQRSA 18
A G R++ P A T P P R+ GR A +RSA
Sbjct: 14 ASGDDREQNPRRRARTPPSPFRRSLGREEALEGIERSA 51
>02_02_0338 + 9105725-9106581,9106950-9107091
Length = 332
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 91 PQPDHILVTEPKDEPVPLEPTSEVRSLAP 5
P P T P +P PL P ++ R L P
Sbjct: 24 PAPATARTTPPLKKPPPLAPPTQARPLKP 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,058,203
Number of Sequences: 37544
Number of extensions: 212460
Number of successful extensions: 970
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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