Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15o06
         (318 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745205-1|AAU93472.1|   91|Anopheles gambiae cytochrome P450 pr...    27   0.13 
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   3.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   4.8  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    22   6.4  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   6.4  
AY745225-1|AAU93492.1|  156|Anopheles gambiae cytochrome P450 pr...    21   8.4  
AF533512-1|AAM97673.1|  200|Anopheles gambiae odorant binding pr...    21   8.4  

>AY745205-1|AAU93472.1|   91|Anopheles gambiae cytochrome P450
           protein.
          Length = 91

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -3

Query: 211 PCNDYVNTATRHVLLRQGVLGIKVKIMLPWDRQGKNGPKKPQPDHILVTEPK 56
           P +DYV   TRH++ +  V+ I +   +  D      P++  PD  L  E K
Sbjct: 10  PSSDYVIPGTRHIVPKDTVVQIPI-YAIQRDPDHYPDPERFDPDRFLPEEVK 60


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 17/63 (26%), Positives = 25/63 (39%)
 Frame = -2

Query: 227  DPLWRPLQ*LRQHCYQTCASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRA 48
            +P+  PL   R   + T    T S R   +    +  + +  PEE  T+  P     G  
Sbjct: 1066 NPMLDPLGISRAGPHATAFPVTASHRRNNRRGSMLELSGEAIPEENYTKSLPERDKYGAR 1125

Query: 47   RAP 39
            RAP
Sbjct: 1126 RAP 1128


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 224  PLWRPLQ*LRQHCYQTCASQTRSTRNQGQNH 132
            P+ +PLQ L+    Q    Q +  + Q Q H
Sbjct: 1292 PIQQPLQTLQHQYQQQLQQQQQQQQQQQQQH 1322


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 202 DYVNTATRHVLLRQGVLGIKVKIMLPWDRQGKNG 101
           D V+   R VLL    LG+K +I L +    K G
Sbjct: 6   DEVSPPVRGVLLAIAALGVKDRIKLEYIDLFKGG 39


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse
          transcriptase protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 36 SRGTGSSLGSVTRMWSGC 89
          SRG+ + + SV R WS C
Sbjct: 17 SRGSPTGVYSVRRRWSLC 34


>AY745225-1|AAU93492.1|  156|Anopheles gambiae cytochrome P450
           protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = -3

Query: 190 TATRHVLLRQGVLGIKVKIMLPWDRQGKNGPKKPQPDHILVTEPKDEP 47
           T T+ + LR+G   I     + +D      P K  PD  L    K  P
Sbjct: 96  TDTKRITLRRGTSVIIPVYAIHYDPDIYPMPYKFDPDRFLEENRKSRP 143


>AF533512-1|AAM97673.1|  200|Anopheles gambiae odorant binding
           protein-8 protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = -2

Query: 188 CYQTCASQTRSTRNQGQNHVAVGPARQERPEEATTRP 78
           C+ T  +  ++    G N  A GP     P E   +P
Sbjct: 14  CFLTFGALLQAGVLAGDNPCAAGPPVDTNPAECCPKP 50


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,974
Number of Sequences: 2352
Number of extensions: 7404
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21181083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)