Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15o06
(318 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal prote... 151 1e-37
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 30 0.31
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 30 0.31
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 29 0.73
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 28 1.7
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 28 1.7
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 28 1.7
AF047655-7|AAC04404.1| 561|Caenorhabditis elegans Hypothetical ... 28 1.7
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical p... 27 2.9
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 27 2.9
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 27 2.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 2.9
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical pr... 27 3.9
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 27 3.9
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 27 3.9
AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein. 27 3.9
U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in b... 26 5.1
AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical ... 26 5.1
AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna bin... 26 5.1
AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna bin... 26 5.1
AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna bin... 26 5.1
Z81595-6|CAB04754.2| 295|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z81595-5|CAB04755.2| 289|Caenorhabditis elegans Hypothetical pr... 26 6.8
U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical pr... 26 6.8
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 26 6.8
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 26 6.8
EF445109-1|ABQ01576.1| 273|Caenorhabditis elegans scramblase 1 ... 26 6.8
AF024503-8|AAG24090.2| 283|Caenorhabditis elegans Hypothetical ... 26 6.8
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 26 6.8
Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 25 8.9
Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical pr... 25 8.9
>U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 3 protein.
Length = 247
Score = 151 bits (366), Expect = 1e-37
Identities = 67/98 (68%), Positives = 82/98 (83%)
Frame = -3
Query: 316 ESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 137
ESGA+G EV+VSGKLRGQRAK+MKFVDGLMIHSG P NDY+ A RHV LRQGV+GIKVK
Sbjct: 130 ESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVK 189
Query: 136 IMLPWDRQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 23
IMLP+D +G+NGP+ PDH+ + EP++E +P EP S+
Sbjct: 190 IMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQ 227
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 30.3 bits (65), Expect = 0.31
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -2
Query: 194 QHCYQTCASQTRSTRNQGQNHVA 126
Q CY CAS T ST Q QNH A
Sbjct: 1799 QGCYGDCASITISTTIQNQNHTA 1821
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 30.3 bits (65), Expect = 0.31
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -2
Query: 194 QHCYQTCASQTRSTRNQGQNHVA 126
Q CY CAS T ST Q QNH A
Sbjct: 1799 QGCYGDCASITISTTIQNQNHTA 1821
>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 29.1 bits (62), Expect = 0.73
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 161 RSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQRSA 18
RSTR +G+ A QE+ E T+ H N+A+ R PR + +A
Sbjct: 430 RSTRGRGRKSQANEENLQEKETEDPTKTHDTNQAKS-TRTPRGRRSNA 476
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -3
Query: 91 PQPDHILVTEPKDEPVPL---EPTSE 23
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -3
Query: 91 PQPDHILVTEPKDEPVPL---EPTSE 23
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -3
Query: 91 PQPDHILVTEPKDEPVPL---EPTSE 23
P+P+ ++++EP EPVP+ EP E
Sbjct: 468 PEPEPVVISEPVPEPVPIVVEEPPKE 493
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -3
Query: 91 PQPDHILVTEPKDEPVPL---EPTSE 23
P+P+ ++++EP EPVP+ EP E
Sbjct: 468 PEPEPVVISEPVPEPVPIVVEEPPKE 493
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -3
Query: 91 PQPDHILVTEPKDEPVPL---EPTSE 23
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -3
Query: 91 PQPDHILVTEPKDEPVPL---EPTSE 23
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>AF047655-7|AAC04404.1| 561|Caenorhabditis elegans Hypothetical
protein C17B7.10 protein.
Length = 561
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -3
Query: 250 MKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDRQGKNGP 98
++ +DGLM DP ++ + + L+R GV + + I DR+ + P
Sbjct: 74 LQIIDGLMFQLPDPSDETFSKCSEFKLIRTGVAELFLSIAC--DRRSSHSP 122
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -2
Query: 170 SQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQRSALPRAR 3
S R +RN+ + P R+ R + + P P + R +P A R + PR R
Sbjct: 131 SPPRPSRNRHDSDKDNSPPRRRRHDSDNSPPRPSRKI--REESPSARNRRSPPRTR 184
>Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 116 ARQERPEEATTRPHPGNRAQGRARAPRADQ 27
A Q+R ++A H G+RA G+ +ADQ
Sbjct: 243 AGQKRTQQADQEQHRGSRAAGQKGTQQADQ 272
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = -2
Query: 194 QHCYQTCASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQ 27
QH A + + + + H A Q+ ++A H G+RA G +ADQ
Sbjct: 333 QHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQADQ 388
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -2
Query: 194 QHCYQTCASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQ 27
QH A + + + + H A ++ ++A H G+RA G+ +ADQ
Sbjct: 487 QHRGSRAAGEKGTQQLDQERHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQ 542
>Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical
protein F49B2.3 protein.
Length = 322
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3
Query: 124 WDRQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPA 2
WD K G + P+ EP P P P EV S+APA
Sbjct: 240 WDGSKKLGSRHPRSLKSQRFEPSQPPPPPPPPPEV-SIAPA 279
>Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 116 ARQERPEEATTRPHPGNRAQGRARAPRADQ 27
A Q+R ++A H G+RA G+ +ADQ
Sbjct: 243 AGQKRTQQADQEQHRGSRAAGQKGTQQADQ 272
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = -2
Query: 194 QHCYQTCASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQ 27
QH A + + + + H A Q+ ++A H G+RA G +ADQ
Sbjct: 333 QHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQADQ 388
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -2
Query: 194 QHCYQTCASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQ 27
QH A + + + + H A ++ ++A H G+RA G+ +ADQ
Sbjct: 487 QHRGSRAAGEKGTQQLDQERHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQ 542
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical
protein E03G2.2 protein.
Length = 1503
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +3
Query: 3 AGARERTSLVGSRGTGSS---LGSVTRMWSGCGFFG 101
AG++E ++VGS G+G S L ++ M CG+ G
Sbjct: 654 AGSKELVTVVGSVGSGKSSLLLAALGEMEKVCGYVG 689
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 170 SQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQRSALP 12
S++RS N + P+R + + + P G+R+ +PR RSA P
Sbjct: 253 SRSRSRSRSADNRKSRSPSRSPKKVDRSPSPPRGSRSPSEKGSPRR-SRSASP 304
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 167 QTRSTRNQGQNHVAVGPARQERPEEATTRP--HPGNRAQGRA 48
Q + R Q GP RQ++P++ + +P PG + QG++
Sbjct: 553 QGPAPRGAPQKPFYQGPPRQQQPQQHSQQPAQQPGQQGQGQS 594
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 149 NQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQ 27
N+G +H GP R + R H GNR Q + R+ +Q
Sbjct: 71 NRGHHH---GPPRNHNQDRNRHRNHDGNRHQNQDRSRHHNQ 108
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 149 NQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRADQ 27
N+G +H GP R + R H GNR Q + R+ +Q
Sbjct: 915 NRGHHH---GPPRNHNQDRNRHRNHDGNRHQNQDRSRHHNQ 952
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -2
Query: 134 HVAVGPARQERPEEATTRPH--PGNRAQGRARAPRA 33
H + R ERP A++RP G RAR P A
Sbjct: 43 HASTTNTRMERPSTASSRPRTSTGRAPSARARPPSA 78
>Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical
protein DY3.7 protein.
Length = 922
Score = 26.6 bits (56), Expect = 3.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3
Query: 235 GLMIHSGDPCNDY 197
GL++H G PCN+Y
Sbjct: 691 GLILHPGSPCNNY 703
>Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical
protein C11G6.1 protein.
Length = 643
Score = 26.6 bits (56), Expect = 3.9
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 151 GIKVKIMLPWDRQGKNG-PKKPQPDHIL-VTEPKDEPVPLEPTSEVR 17
G + I P +G G PKKP+P+ ++ V +PK P P + T E R
Sbjct: 379 GSSMSIGTPTKVKGLPGRPKKPKPEGVVTVPKPKGRP-PKKATLEKR 424
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 26.6 bits (56), Expect = 3.9
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -3
Query: 274 LRGQRAKSMKFVDGLMIHSG 215
LRG R K+ FV+G+++++G
Sbjct: 272 LRGSRIKNTTFVEGIVVYAG 291
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 26.6 bits (56), Expect = 3.9
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -3
Query: 274 LRGQRAKSMKFVDGLMIHSG 215
LRG R K+ FV+G+++++G
Sbjct: 272 LRGSRIKNTTFVEGIVVYAG 291
>AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein.
Length = 922
Score = 26.6 bits (56), Expect = 3.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3
Query: 235 GLMIHSGDPCNDY 197
GL++H G PCN+Y
Sbjct: 691 GLILHPGSPCNNY 703
>U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 11 protein.
Length = 395
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = -2
Query: 266 STCQINEVCRWTHDPLWRPLQ*LRQHCYQTCASQTRSTRNQGQNHVAVGPARQERPEEAT 87
+TCQ + C T +P+Q + C Q+C Q + N V P Q +
Sbjct: 200 NTCQNS--CLNTCQQQQQPVQQCQSSCDQSCQPQCATPSGSAYNQVNYQPQAQNNYQTNN 257
Query: 86 TRPHPG 69
PG
Sbjct: 258 NYQQPG 263
>AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical
protein F19B10.4 protein.
Length = 464
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -2
Query: 194 QHCYQTCASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPRAD 30
Q C Q S +S N + GPA++ RPE P +R + + R D
Sbjct: 113 QSCLQNELSALKSANNAMKTSKN-GPAKEHRPENGKLSPETLDRGKEENQEGRQD 166
>AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform a protein.
Length = 328
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 1 ARARGSALRWSARGARARPWALLPGCGLVVASSGRSCLAGPTAT 132
A RG L A G P + G +V++ SGR+ AG TAT
Sbjct: 242 ALQRG-VLPMMANGLSRSPTMAVCGAPIVMSPSGRASSAGATAT 284
>AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform c protein.
Length = 445
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 1 ARARGSALRWSARGARARPWALLPGCGLVVASSGRSCLAGPTAT 132
A RG L A G P + G +V++ SGR+ AG TAT
Sbjct: 284 ALQRG-VLPMMANGLSRSPTMAVCGAPIVMSPSGRASSAGATAT 326
>AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform b protein.
Length = 403
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 1 ARARGSALRWSARGARARPWALLPGCGLVVASSGRSCLAGPTAT 132
A RG L A G P + G +V++ SGR+ AG TAT
Sbjct: 242 ALQRG-VLPMMANGLSRSPTMAVCGAPIVMSPSGRASSAGATAT 284
>Z81595-6|CAB04754.2| 295|Caenorhabditis elegans Hypothetical
protein T22H2.5b protein.
Length = 295
Score = 25.8 bits (54), Expect = 6.8
Identities = 7/28 (25%), Positives = 17/28 (60%)
Frame = +3
Query: 6 GARERTSLVGSRGTGSSLGSVTRMWSGC 89
G +++ + + G+ +G++T+ W GC
Sbjct: 212 GCQDKEFPIKTANNGTVVGAITKKWGGC 239
>Z81595-5|CAB04755.2| 289|Caenorhabditis elegans Hypothetical
protein T22H2.5a protein.
Length = 289
Score = 25.8 bits (54), Expect = 6.8
Identities = 7/28 (25%), Positives = 17/28 (60%)
Frame = +3
Query: 6 GARERTSLVGSRGTGSSLGSVTRMWSGC 89
G +++ + + G+ +G++T+ W GC
Sbjct: 212 GCQDKEFPIKTANNGTVVGAITKKWGGC 239
>U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical
protein D1044.2b protein.
Length = 501
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 148 IKVKIMLPWDRQG-KNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPA 2
++ ++ P R G + ++P PD + T K+E P + S APA
Sbjct: 193 VQPELFRPNQRNGVQKSTQRPLPDFSIRTPLKEEATTSVPREKTSSAAPA 242
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
protein D1044.2c protein.
Length = 1090
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 148 IKVKIMLPWDRQG-KNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPA 2
++ ++ P R G + ++P PD + T K+E P + S APA
Sbjct: 743 VQPELFRPNQRNGVQKSTQRPLPDFSIRTPLKEEATTSVPREKTSSAAPA 792
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
protein D1044.2a protein.
Length = 1051
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 148 IKVKIMLPWDRQG-KNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPA 2
++ ++ P R G + ++P PD + T K+E P + S APA
Sbjct: 743 VQPELFRPNQRNGVQKSTQRPLPDFSIRTPLKEEATTSVPREKTSSAAPA 792
>EF445109-1|ABQ01576.1| 273|Caenorhabditis elegans scramblase 1
protein.
Length = 273
Score = 25.8 bits (54), Expect = 6.8
Identities = 7/28 (25%), Positives = 17/28 (60%)
Frame = +3
Query: 6 GARERTSLVGSRGTGSSLGSVTRMWSGC 89
G +++ + + G+ +G++T+ W GC
Sbjct: 196 GCQDKEFPIKTANNGTVVGAITKKWGGC 223
>AF024503-8|AAG24090.2| 283|Caenorhabditis elegans Hypothetical
protein F31F4.11 protein.
Length = 283
Score = 25.8 bits (54), Expect = 6.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 272 AWSTCQINEVCRWTH 228
AW+TC + C WTH
Sbjct: 17 AWATCVVIIFCCWTH 31
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -2
Query: 128 AVGPARQERPEEATTRPHPGNRAQGRARAPRADQRSALPRA 6
AV +PE ATT P P ++ APR + P++
Sbjct: 190 AVVTTEATQPEVATTLPEPSTTSEPLTSAPRMVATTDAPKS 230
>Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical
protein F23D12.5 protein.
Length = 867
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 170 SQTRSTRNQGQNHVAVGPARQERPEE-ATTRPHPGNRAQGR 51
S+ R + + Q VGP+R+ +PE T+ A+GR
Sbjct: 189 SKLRKSESHEQGEFLVGPSRKRKPETLIETKSKKRKSARGR 229
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 71 GNRAQGRARAPRADQRSALPR 9
G ++GR+ +PRA R A+P+
Sbjct: 310 GTMSRGRSNSPRAPSRDAVPQ 330
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 71 GNRAQGRARAPRADQRSALPR 9
G ++GR+ +PRA R A+P+
Sbjct: 310 GTMSRGRSNSPRAPSRDAVPQ 330
>Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical
protein F13H10.6 protein.
Length = 88
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 115 QGKNGPKKPQPDHILVTEPK 56
QG+ GP PQ H++V E +
Sbjct: 36 QGQQGPYYPQQPHVVVVEER 55
>Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical
protein B0393.2 protein.
Length = 585
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 70 VTEPKDEPVPLEPTSEVRSLAPA 2
VTE P+P EP V+ APA
Sbjct: 236 VTESPKRPIPKEPYMRVQDSAPA 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,924,751
Number of Sequences: 27780
Number of extensions: 161413
Number of successful extensions: 628
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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